Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A08
         (857 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    30   0.10 
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    29   0.24 
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   0.55 
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    24   5.1  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    24   5.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.0  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 29.9 bits (64), Expect = 0.10
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 668 LDGRWNFRAHFAKLGPRLMATAGSLXRLLPNVGGSRS 778
           +D R +FR H       +   A SL +++PN+GG +S
Sbjct: 712 IDDRLSFRKHVEYACNNVFKAAISLIQIMPNIGGPKS 748


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 28.7 bits (61), Expect = 0.24
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
 Frame = +1

Query: 271 VGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATIPDLIVRRFGGLDS-SPWSVARAAAKS 447
           VG+W RL  +   A  HA V    LA+ +  A     ++ RFG  D  + WS    +  S
Sbjct: 286 VGRWQRLRTETLNAVAHATV----LALIAAVAACLWAVLDRFGPADHFAAWSALYVSLAS 341

Query: 448 DKIRKKLRWAWKQLRRFSR-RH 510
           +     L +  + L R  R RH
Sbjct: 342 NGTMAALGYVCQLLGRLERYRH 363


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 27.5 bits (58), Expect = 0.55
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 668 LDGRWNFRAHFAKLGPRLMATAGSLXRLLPNVGG 769
           +D R  F++H  +   ++M    +L    PN+GG
Sbjct: 773 IDDRLKFKSHLEEACKKVMKAINALAAFTPNIGG 806


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 677 RWNFRAHFAKLGPRLMATAGS 739
           RWN  AHF  L P  + T G+
Sbjct: 120 RWNVTAHFLNLLPADVMTLGN 140


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 677 RWNFRAHFAKLGPRLMATAGS 739
           RWN  AHF  L P  + T G+
Sbjct: 120 RWNVTAHFLNLLPADVMTLGN 140


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -2

Query: 295 PVALATVRLLSGFGHRAFSIGHPRCFQTQNRAGISESDELSKSPT 161
           P  +A ++L++G G    +IG    F+    A  S  D    SP+
Sbjct: 136 PKGIALLQLVNGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPS 180


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 944,165
Number of Sequences: 2352
Number of extensions: 20628
Number of successful extensions: 52
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)