Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A08
(857 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110997-1|AAI10998.1| 916|Homo sapiens coiled-coil domain cont... 33 1.8
BC040264-1|AAH40264.1| 751|Homo sapiens coiled-coil domain cont... 33 1.8
AK074059-1|BAB84885.1| 294|Homo sapiens FLJ00130 protein protein. 33 1.8
BC098394-1|AAH98394.1| 1327|Homo sapiens tankyrase, TRF1-interac... 32 3.1
AF082556-1|AAC79841.1| 1327|Homo sapiens TRF1-interacting ankyri... 32 3.1
U31501-1|AAC50292.1| 673|Homo sapiens fragile X mental retardat... 31 5.4
BT009817-1|AAP88819.1| 673|Homo sapiens fragile X mental retard... 31 5.4
BC067272-1|AAH67272.1| 673|Homo sapiens fragile X mental retard... 31 5.4
BC051907-1|AAH51907.1| 673|Homo sapiens fragile X mental retard... 31 5.4
BC020090-1|AAH20090.1| 673|Homo sapiens fragile X mental retard... 31 5.4
L19267-1|AAA35767.1| 553|Homo sapiens protein ( Homo sapiens 59... 30 9.4
BT006798-1|AAP35444.1| 334|Homo sapiens dystrophia myotonica-co... 30 9.4
BC019266-1|AAH19266.1| 334|Homo sapiens DMWD protein protein. 30 9.4
>BC110997-1|AAI10998.1| 916|Homo sapiens coiled-coil domain
containing 57 protein.
Length = 916
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 721 QSRAQLRKVSAEVPPTIQFEAEVPKTGHPDPDA--DASDHEVGTQRRRSSRPVKQQGLGF 548
Q R ++ +S ++PP IQ AE PDP+A DA+ + R +K +
Sbjct: 537 QMRKEMEALSHQIPPPIQTAAESTDANQPDPEAGGDAATPDYVLALEAEIRTLKHK-FKT 595
Query: 547 VERHL 533
+E+HL
Sbjct: 596 LEKHL 600
>BC040264-1|AAH40264.1| 751|Homo sapiens coiled-coil domain
containing 57 protein.
Length = 751
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 721 QSRAQLRKVSAEVPPTIQFEAEVPKTGHPDPDA--DASDHEVGTQRRRSSRPVKQQGLGF 548
Q R ++ +S ++PP IQ AE PDP+A DA+ + R +K +
Sbjct: 537 QMRKEMEALSHQIPPPIQTAAESTDANQPDPEAGGDAATPDYVLALEAEIRTLKHK-FKT 595
Query: 547 VERHL 533
+E+HL
Sbjct: 596 LEKHL 600
>AK074059-1|BAB84885.1| 294|Homo sapiens FLJ00130 protein protein.
Length = 294
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 721 QSRAQLRKVSAEVPPTIQFEAEVPKTGHPDPDA--DASDHEVGTQRRRSSRPVKQQGLGF 548
Q R ++ +S ++PP IQ AE PDP+A DA+ + R +K +
Sbjct: 80 QMRKEMEALSHQIPPPIQTAAESTDANQPDPEAGGDAATPDYVLALEAEIRTLKHK-FKT 138
Query: 547 VERHL 533
+E+HL
Sbjct: 139 LEKHL 143
>BC098394-1|AAH98394.1| 1327|Homo sapiens tankyrase,
TRF1-interacting ankyrin-related ADP-ribose polymerase
protein.
Length = 1327
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 596 PEAALVPARETTGPGFCRAPPSVPAVGSL*RRLNLRSCFQAHRSFLRILSDLAAALATD- 420
PEAA V + GPG VPAV R L L +C S ++ L D A A D
Sbjct: 154 PEAAGVSSTAPLGPGAAGPGTGVPAVSGALREL-LEACRNGDVSRVKRLVDAANVNAKDM 212
Query: 419 HGDESSP 399
G +SSP
Sbjct: 213 AGRKSSP 219
>AF082556-1|AAC79841.1| 1327|Homo sapiens TRF1-interacting
ankyrin-related ADP-ribose polymerase protein.
Length = 1327
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 596 PEAALVPARETTGPGFCRAPPSVPAVGSL*RRLNLRSCFQAHRSFLRILSDLAAALATD- 420
PEAA V + GPG VPAV R L L +C S ++ L D A A D
Sbjct: 154 PEAAGVSSTAPLGPGAAGPGTGVPAVSGALREL-LEACRNGDVSRVKRLVDAANVNAKDM 212
Query: 419 HGDESSP 399
G +SSP
Sbjct: 213 AGRKSSP 219
>U31501-1|AAC50292.1| 673|Homo sapiens fragile X mental retardation
syndrome related protein protein.
Length = 673
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -3
Query: 801 PIRGGAPPDRDPPTFGSSRXKEPAVAISRGP 709
P R G P DRDPPT G + P RGP
Sbjct: 463 PNRAG-PGDRDPPTRGEESRRRPTGGRGRGP 492
>BT009817-1|AAP88819.1| 673|Homo sapiens fragile X mental
retardation, autosomal homolog 2 protein.
Length = 673
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -3
Query: 801 PIRGGAPPDRDPPTFGSSRXKEPAVAISRGP 709
P R G P DRDPPT G + P RGP
Sbjct: 463 PNRAG-PGDRDPPTRGEESRRRPTGGRGRGP 492
>BC067272-1|AAH67272.1| 673|Homo sapiens fragile X mental
retardation, autosomal homolog 2 protein.
Length = 673
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -3
Query: 801 PIRGGAPPDRDPPTFGSSRXKEPAVAISRGP 709
P R G P DRDPPT G + P RGP
Sbjct: 463 PNRAG-PGDRDPPTRGEESRRRPTGGRGRGP 492
>BC051907-1|AAH51907.1| 673|Homo sapiens fragile X mental
retardation, autosomal homolog 2 protein.
Length = 673
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -3
Query: 801 PIRGGAPPDRDPPTFGSSRXKEPAVAISRGP 709
P R G P DRDPPT G + P RGP
Sbjct: 463 PNRAG-PGDRDPPTRGEESRRRPTGGRGRGP 492
>BC020090-1|AAH20090.1| 673|Homo sapiens fragile X mental
retardation, autosomal homolog 2 protein.
Length = 673
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -3
Query: 801 PIRGGAPPDRDPPTFGSSRXKEPAVAISRGP 709
P R G P DRDPPT G + P RGP
Sbjct: 463 PNRAG-PGDRDPPTRGEESRRRPTGGRGRGP 492
>L19267-1|AAA35767.1| 553|Homo sapiens protein ( Homo sapiens 59
protein mRNA, 3' end. ).
Length = 553
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -1
Query: 803 PXLEAARHLIGTPRRLEAAGSKSRPSPSVEGPTSQS-ERGSSTDHPVRG 660
P L R L GTP A S SR GP +S R +S HP G
Sbjct: 333 PPLARTRTLPGTPGTTPPAASSSRGGEPGPGPLPRSLSRSNSLPHPAGG 381
>BT006798-1|AAP35444.1| 334|Homo sapiens dystrophia
myotonica-containing WD repeat motif protein.
Length = 334
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -1
Query: 803 PXLEAARHLIGTPRRLEAAGSKSRPSPSVEGPTSQS-ERGSSTDHPVRG 660
P L R L GTP A S SR GP +S R +S HP G
Sbjct: 139 PPLARTRTLPGTPGTTPPAASSSRGGEPGPGPLPRSLSRSNSLPHPAGG 187
>BC019266-1|AAH19266.1| 334|Homo sapiens DMWD protein protein.
Length = 334
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -1
Query: 803 PXLEAARHLIGTPRRLEAAGSKSRPSPSVEGPTSQS-ERGSSTDHPVRG 660
P L R L GTP A S SR GP +S R +S HP G
Sbjct: 139 PPLARTRTLPGTPGTTPPAASSSRGGEPGPGPLPRSLSRSNSLPHPAGG 187
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,193,439
Number of Sequences: 237096
Number of extensions: 3457569
Number of successful extensions: 10642
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10614
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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