Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A05
         (1235 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   7.9  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   7.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    21   9.8  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +2

Query: 44  GGGGGXAGGXNXXXMXXMGGPXXVXXQR 127
           GGGGG  GG        +GG   V   R
Sbjct: 558 GGGGGGGGGVGGGIGLSLGGAAGVDGSR 585


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +2

Query: 44  GGGGGXAGGXNXXXMXXMGGPXXVXXQR 127
           GGGGG  GG        +GG   V   R
Sbjct: 559 GGGGGGGGGVGGGIGLSLGGAAGVDGSR 586


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 21.0 bits (42), Expect(2) = 9.8
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +2

Query: 47  GGGGXAGGXNXXXMXXMGGP 106
           GGGG  GG         GGP
Sbjct: 203 GGGGSGGGAPGGGGGSSGGP 222



 Score = 20.6 bits (41), Expect(2) = 9.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 44  GGGGGXAGG 70
           GGGGG  GG
Sbjct: 170 GGGGGGGGG 178


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,180
Number of Sequences: 2352
Number of extensions: 1355
Number of successful extensions: 77
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 141017715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)