Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A02
(851 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 35 0.33
AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 34 0.75
AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 34 0.75
AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 34 0.75
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.0
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.0
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.0
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.0
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.0
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.0
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.0
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.0
AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens ... 31 7.0
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 35.1 bits (77), Expect = 0.33
Identities = 25/67 (37%), Positives = 28/67 (41%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPSAYLT 712
PP PGD G I P +P PP P P P P +P PPLS +A
Sbjct: 577 PPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGTAISP--PPPLSGDATIPPPP 634
Query: 713 PLVTGHG 733
PL G G
Sbjct: 635 PLPEGVG 641
>AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 33.9 bits (74), Expect = 0.75
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKS-PNSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 697
PP P L P S P+S QPP P P P+ + PG +PP +++P
Sbjct: 44 PPPPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 33.9 bits (74), Expect = 0.75
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKS-PNSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 697
PP P L P S P+S QPP P P P+ + PG +PP +++P
Sbjct: 44 PPPPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting
protein 1 protein.
Length = 495
Score = 33.9 bits (74), Expect = 0.75
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKS-PNSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 697
PP P L P S P+S QPP P P P+ + PG +PP +++P
Sbjct: 44 PPPPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ30019 fis, clone 3NB692000545. ).
Length = 262
Score = 30.7 bits (66), Expect = 7.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 596 QPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPSAYLTP 715
+PP + PFP +P +P FAP L+PP +AP + P
Sbjct: 85 RPPSS--PFPPVPGSP----FAPSLRPPAWMDAPRLPVRP 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,941,882
Number of Sequences: 237096
Number of extensions: 2855159
Number of successful extensions: 6963
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6958
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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