Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A01
(1053 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 32 0.66
08_02_1615 + 28257275-28258428,28258523-28259144 26 1.9
08_01_0112 - 885965-886010,887084-887145,887908-887976,888076-88... 31 2.0
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 26 3.2
08_02_0796 - 21300251-21300373,21300846-21301721 30 3.5
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 30 3.5
04_04_1027 - 30216859-30217212,30218769-30219178,30219395-30219800 30 3.5
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 3.5
07_03_0154 + 14509979-14512033 29 4.7
04_04_1687 - 35365766-35366356,35367137-35368135 29 4.7
12_01_0841 - 7873458-7874225 25 5.8
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 26 6.6
12_02_1174 - 26696869-26698191 29 8.2
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 8.2
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 8.2
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 29 8.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 8.2
07_01_0080 + 587674-588510 29 8.2
06_03_0729 + 23927656-23927661,23927774-23927923,23928316-239285... 29 8.2
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 8.2
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 8.2
02_05_0686 - 30900748-30902167,30903442-30904742 29 8.2
01_06_1330 - 36361275-36361448,36361778-36361973,36362248-363623... 29 8.2
>02_04_0567 -
23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 32.3 bits (70), Expect = 0.66
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 64 FLXPVXXXPXXPPPXXPPPPP 2
FL P P PPP PPPPP
Sbjct: 35 FLCPPPPPPPPPPPPPPPPPP 55
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 39 PPPPPPPPPPPPPPPPPP 56
>08_02_1615 + 28257275-28258428,28258523-28259144
Length = 591
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 31 PPPXXPPPPP 2
PPP PPPPP
Sbjct: 68 PPPKSPPPPP 77
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPP 5
P P P P PPPP
Sbjct: 54 PAAAAPPPPAPLTPPPP 70
>08_01_0112 -
885965-886010,887084-887145,887908-887976,888076-888123,
888205-888264,888392-888504,888578-888650,888725-888769,
889382-889527,890782-890842,891913-892056,892164-892400
Length = 367
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 6 GGGGXXGGGXLGXNXTGXRXSFVRTXLAXRGVAQVDQLSVKVSD 137
GGGG GGG G G R RT +A R +V + +V VSD
Sbjct: 82 GGGGGGGGGFGGQGHAGKRRMNSRTSMAQRD--EVIRRTVYVSD 123
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 25.8 bits (54), Expect(2) = 3.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 31 PPPXXPPPPP 2
PPP PPPPP
Sbjct: 77 PPPPPPPPPP 86
Score = 22.6 bits (46), Expect(2) = 3.2
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPP 5
P P PPP PP P
Sbjct: 51 PADTTPTSPPPASPPLP 67
>08_02_0796 - 21300251-21300373,21300846-21301721
Length = 332
Score = 29.9 bits (64), Expect = 3.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P+ P PPP PPPPP
Sbjct: 98 PLLALPPPPPPPPPPPPP 115
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 61 LXPVXXXPXXPPPXXPPPPP 2
L P P PPP PPPPP
Sbjct: 424 LPPPPPLPPPPPPPPPPPPP 443
>04_04_1027 -
30216859-30217212,30218769-30219178,30219395-30219800
Length = 389
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 61 LXPVXXXPXXPPPXXPPPPP 2
L P P PPP PPPPP
Sbjct: 17 LGPPAPAPVPPPPPPPPPPP 36
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 61 LXPVXXXPXXPPPXXPPPPP 2
L P P PPP PPPPP
Sbjct: 351 LMPPPPPPPPPPPPPPPPPP 370
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 61 LXPVXXXPXXPPPXXPPPPP 2
+ P P PPP PPPPP
Sbjct: 352 MPPPPPPPPPPPPPPPPPPP 371
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 349 PKLMPPPPPPPPPPPPPP 366
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 360 PPPPPPPPPPPPRPPPPP 377
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 361 PPPPPPPPPPPRPPPPPP 378
>07_03_0154 + 14509979-14512033
Length = 684
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 49 PAAAPPPPPPPPPPPPPP 66
>04_04_1687 - 35365766-35366356,35367137-35368135
Length = 529
Score = 29.5 bits (63), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 5 PAATAPPPPPPPPPPPPP 22
>12_01_0841 - 7873458-7874225
Length = 255
Score = 25.0 bits (52), Expect(2) = 5.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 6 GGGGXXGGGXLGXNXTG 56
GGGG GGG G N +G
Sbjct: 146 GGGGGGGGGQGGGNGSG 162
Score = 25.0 bits (52), Expect(2) = 5.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 6 GGGGXXGGGXLGXNXTG 56
GGGG GGG G N +G
Sbjct: 185 GGGGGGGGGQGGGNGSG 201
Score = 22.6 bits (46), Expect(2) = 5.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 3 GGGGGXXGGG 32
GGGGG GGG
Sbjct: 110 GGGGGGQGGG 119
Score = 22.6 bits (46), Expect(2) = 5.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 3 GGGGGXXGGG 32
GGGGG GGG
Sbjct: 149 GGGGGGQGGG 158
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 25.8 bits (54), Expect(2) = 6.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 31 PPPXXPPPPP 2
PPP PPPPP
Sbjct: 91 PPPSPPPPPP 100
Score = 21.4 bits (43), Expect(2) = 6.6
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -3
Query: 40 PXXPPPXXPPPP 5
P PP PPPP
Sbjct: 42 PMPGPPSQPPPP 53
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 148 PPPSLPPPPPPPPPPPPP 165
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 21 PELRLPPPPPPHPPPPPP 38
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 74 PPPQTPPSPPPPPPPPPP 91
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 75 PPQTPPSPPPPPPPPPPP 92
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 259 PQSVRPPPPPPPPPPPPP 276
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 108 PPPPPPPSPPPSAPPPPP 125
>07_01_0080 + 587674-588510
Length = 278
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 99 PSSGSPPPPPPPPPPPPP 116
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 104 PPPPPPPPPPPPPPPPPP 121
>06_03_0729 +
23927656-23927661,23927774-23927923,23928316-23928567,
23929072-23929209,23931213-23932730
Length = 687
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 203 PSSDAPSPPPPSPPPPPP 220
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 28.7 bits (61), Expect = 8.2
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Frame = -3
Query: 529 PGPGEX-STPPVVAAAXSXTTSGLXQAFXRTPAQVLQ--PHSPAFQTQSXVDPIHLKXCP 359
PGPG S+ P + + + +P+ V PHSP S PI+ P
Sbjct: 1601 PGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSP 1660
Query: 358 VSAPVDLGLXNVSMSHXPGS 299
+ +P L S + P S
Sbjct: 1661 IYSPTSLSYSPTSPVYSPTS 1680
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 345 PSNAPPPPPPPPPPPPPP 362
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 331 PPKAAPPPPPPKGPPPPP 348
>01_06_1330 -
36361275-36361448,36361778-36361973,36362248-36362325,
36362685-36362807,36363206-36363463,36363914-36364073,
36364702-36364812,36365159-36365429,36365514-36365663,
36366383-36367090
Length = 742
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 55 PVXXXPXXPPPXXPPPPP 2
P P PPP PPPPP
Sbjct: 99 PPPSLPPPPPPLRPPPPP 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,984,856
Number of Sequences: 37544
Number of extensions: 515088
Number of successful extensions: 9171
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5675
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3117811332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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