Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A01
         (1053 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          26   1.4  
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.     26   1.7  
BC027878-1|AAH27878.1|  546|Homo sapiens chromosome 1 open readi...    31   5.3  
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.     31   7.0  
AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein.              31   7.0  
BC030225-1|AAH30225.1|  134|Homo sapiens SNX22 protein protein.        31   9.3  

>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 26.2 bits (55), Expect(2) = 1.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 55  PVXXXPXXPPPXXPPPP 5
           P    P  PPP  PPPP
Sbjct: 64  PFAALPPPPPPPPPPPP 80



 Score = 25.8 bits (54), Expect(2) = 1.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 31  PPPXXPPPPP 2
           PPP  PPPPP
Sbjct: 97  PPPQPPPPPP 106


>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
          Length = 1709

 Score = 25.8 bits (54), Expect(2) = 1.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 55  PVXXXPXXPPPXXPPPP 5
           P    P  PPP  PPPP
Sbjct: 602 PPQQPPPPPPPPPPPPP 618



 Score = 25.8 bits (54), Expect(2) = 1.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 31  PPPXXPPPPP 2
           PPP  PPPPP
Sbjct: 644 PPPEYPPPPP 653


>BC027878-1|AAH27878.1|  546|Homo sapiens chromosome 1 open reading
           frame 87 protein.
          Length = 546

 Score = 31.5 bits (68), Expect = 5.3
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
 Frame = -3

Query: 535 IPPGPGEXSTPPVVAAAXSXTTSGLXQAFXRTPAQVLQPHSPAFQTQSXVDPIH-LKXCP 359
           +P G  E   P           S       +TP + LQP S   +T +  DP+  LK  P
Sbjct: 395 LPTGKNEKKAPAPPMEPEVPEMSQSKTEHMKTPEEELQPESSPAETSACKDPLKPLKIRP 454

Query: 358 VSAP 347
           VS P
Sbjct: 455 VSQP 458


>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
          Length = 1766

 Score = 31.1 bits (67), Expect = 7.0
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -3

Query: 55   PVXXXPXXPPPXXPPPPP 2
            PV   P  PPP  PPPPP
Sbjct: 1169 PVPIPPPPPPPPLPPPPP 1186


>AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein.
          Length = 1822

 Score = 31.1 bits (67), Expect = 7.0
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -3

Query: 55   PVXXXPXXPPPXXPPPPP 2
            PV   P  PPP  PPPPP
Sbjct: 1348 PVPIPPPPPPPPLPPPPP 1365


>BC030225-1|AAH30225.1|  134|Homo sapiens SNX22 protein protein.
          Length = 134

 Score = 30.7 bits (66), Expect = 9.3
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 302 PWXVRHANIRESEVHRCGYWAXLQMNWIDXRLSLERRGMGLQHLG 436
           PW  R A  R     RC  W      W++ R  L+RRG   +  G
Sbjct: 40  PWMGRGAGTRRISP-RCAQWGPGARAWVNERCGLDRRGKPCRGFG 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,958,657
Number of Sequences: 237096
Number of extensions: 2388731
Number of successful extensions: 23830
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14530
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14318381434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)