BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030905E5_H11_e472_15.seq (1495 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89... 46 8e-05 12_02_1111 - 26157796-26160330 40 0.004 08_02_0036 - 11455762-11455802,11455996-11456104,11456207-114568... 36 0.082 01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 36 0.11 01_05_0166 + 18844468-18845184,18847394-18847690 33 0.58 01_05_0604 - 23583244-23584989 32 1.3 05_07_0219 - 28474661-28475146,28475979-28476644 31 1.8 02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 31 1.8 03_01_0177 + 1424773-1424850,1425307-1425391,1425498-1425577,142... 31 2.3 12_02_1038 - 25596027-25596393,25596492-25596660,25597283-255973... 30 5.4 03_04_0185 - 18213830-18214552 29 7.2 03_05_1078 + 30205876-30206346,30206624-30207001,30207967-302080... 29 9.5 01_03_0007 - 11578510-11578868,11579144-11579213 29 9.5 >04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-898967, 899078-899160,899335-899485,899896-899952,900279-900479 Length = 393 Score = 46.0 bits (104), Expect = 8e-05 Identities = 22/58 (37%), Positives = 35/58 (60%) Frame = +3 Query: 606 DVSGPSEDTVFGTAIESSIAAKMMQIMGWSGGGLGVDEQGISEPIKPNLQMVKRAGLG 779 + G + +V S++ +++Q MGW G GLG +EQGI+EPIK ++ K G+G Sbjct: 46 ETEGLEQASVDTQLTSSNVGFRLLQKMGWKGKGLGKNEQGITEPIKAGIRDAK-LGVG 102 >12_02_1111 - 26157796-26160330 Length = 844 Score = 40.3 bits (90), Expect = 0.004 Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Frame = +3 Query: 639 GTAIESSIAAKMMQIMGWSGG-GLGVDEQGISEPIKPNLQMVKRAGLGS 782 G+ ++ AKMM +MG+ G GLG +EQGI P++ L+ K AGLGS Sbjct: 178 GSLGSNTKVAKMMAMMGYKDGMGLGKNEQGIVAPVETTLR-PKNAGLGS 225 >08_02_0036 - 11455762-11455802,11455996-11456104,11456207-11456854, 11457422-11457491,11458563-11458624,11458729-11458803, 11459423-11459514,11460233-11461466 Length = 776 Score = 35.9 bits (79), Expect = 0.082 Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = +3 Query: 666 AKMMQIMGW-SGGGLGVDEQGISEPIKPNLQMVKRAGLG 779 +KMM MG+ G GLG D QG+ +PI+P +Q K GLG Sbjct: 615 SKMMAKMGFIEGTGLGKDGQGMMQPIQP-IQRPKSLGLG 652 >01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581, 3609905-3609965,3610017-3610144,3610236-3610385, 3610537-3610791,3611060-3611265,3611469-3611696, 3612161-3612259 Length = 462 Score = 35.5 bits (78), Expect = 0.11 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +3 Query: 609 VSGPSEDTVFGTAIESSIAAKMMQIMGW-SGGGLGVDEQGISEPIKPNLQMVKRAGLG 779 + G S D F ++ +S A KMM+ MGW G LG +G+ EPI+P + AGLG Sbjct: 402 MGGASVDMNFRSSGLNS-AKKMMENMGWKEGEALGKSTKGMVEPIQPTVNK-HGAGLG 457 >01_05_0166 + 18844468-18845184,18847394-18847690 Length = 337 Score = 33.1 bits (72), Expect = 0.58 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +3 Query: 639 GTAIESSIAAKMMQIMGWSGG-GLGVDEQGISEPI 740 G + + A +MM MGW G GLG EQGI+ P+ Sbjct: 163 GAGGQMTAAQRMMARMGWKEGQGLGKQEQGITAPL 197 >01_05_0604 - 23583244-23584989 Length = 581 Score = 31.9 bits (69), Expect = 1.3 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = +3 Query: 639 GTAIESSIAAKMMQIMGWS-GGGLGVDEQGISEPIKPNLQMVKRAGLG 779 G+ + I A++M M + G GLG GI +PIKP ++ K G+G Sbjct: 93 GSLATNQIVARLMAQMNYEEGAGLGKYGHGIIDPIKPTIKYGK-GGIG 139 >05_07_0219 - 28474661-28475146,28475979-28476644 Length = 383 Score = 31.5 bits (68), Expect = 1.8 Identities = 14/46 (30%), Positives = 19/46 (41%) Frame = -1 Query: 718 SSTPKPPPDHPXXXXXXXXXXXXXAVPKTVSSLGPETSLTLILESP 581 ++TP PPP P A P + + P TS TL+ P Sbjct: 83 ATTPHPPPPSPATSSSRTATATATATPTSPTPTPPPTSATLLWPRP 128 >02_05_1041 - 33713561-33714564,33714844-33714904,33715640-33715951, 33716780-33716917 Length = 504 Score = 31.5 bits (68), Expect = 1.8 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Frame = +3 Query: 561 KEQWIAHGDSRISVRDVSGPSEDTVFGTAIES---SIAAKMMQIMGWSGG-GLGVDEQGI 728 +++ + G + +++SG +T E +A+KMM MG+ G GLGV QG+ Sbjct: 271 EDESVHQGLGLLESKNLSGVQTETAIFAKWEHHTRGVASKMMAKMGYREGMGLGVSGQGM 330 Query: 729 SEPI 740 +PI Sbjct: 331 LDPI 334 >03_01_0177 + 1424773-1424850,1425307-1425391,1425498-1425577, 1425771-1425898,1425962-1426049,1426187-1426277, 1426712-1426881,1427151-1427438,1427527-1427643, 1427924-1427976,1428029-1428090,1429042-1429118, 1429269-1429322,1429417-1429476,1429581-1429658, 1429805-1429851,1429933-1430051,1430280-1430364, 1430443-1430557,1430662-1430784,1430869-1430969, 1431346-1431475 Length = 742 Score = 31.1 bits (67), Expect = 2.3 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +3 Query: 609 VSGPSEDTVFGTAIESSIAAKMMQIMGWSGG-GLGVDEQGISEPIK 743 ++ P + + S A ++M+ MGW G GLG D+QGI ++ Sbjct: 1 MAAPEAPSCYVGIARQSAAFRLMKQMGWEEGEGLGKDKQGIKGHVR 46 >12_02_1038 - 25596027-25596393,25596492-25596660,25597283-25597349, 25597617-25597794,25599157-25599228,25599311-25599717, 25600035-25600740,25600829-25600998,25601963-25602022, 25602385-25602435 Length = 748 Score = 29.9 bits (64), Expect = 5.4 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +3 Query: 141 TNEDNEGQTKPEIETQNIEITKQLQEQKYPEKADSNQ 251 TN++ +G+ P E +I L +Q PEK DS+Q Sbjct: 163 TNQNTDGKKDPTTEQDRTDIEFVLLDQCGPEKMDSSQ 199 >03_04_0185 - 18213830-18214552 Length = 240 Score = 29.5 bits (63), Expect = 7.2 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = -1 Query: 943 EARPAXLGTXAGGHGPP*LKSLXNXRSKSMV-SDF 842 E P GT AGG+G P S N RS+S V +DF Sbjct: 48 ETEPDDDGTGAGGNGAPSGLSASNKRSRSQVWNDF 82 >03_05_1078 + 30205876-30206346,30206624-30207001,30207967-30208092, 30209569-30209805 Length = 403 Score = 29.1 bits (62), Expect = 9.5 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +3 Query: 654 SSIAAKMMQIMGWSGGGLGVDEQGISEPIKPNLQMV--KRAGLGSNVKGMHXLRRAALKL 827 ++I ++M ++G GGG G E+G E ++ ++ +R G G++V+ R ++ Sbjct: 76 TNIHRRVMDVLGRMGGGGGGGEKGEGEEMEEEEEVPQRRRRGQGADVESSRGFRH-MMRE 134 Query: 828 MQRFQKSDTIDLDL 869 QR +K DL Sbjct: 135 RQRREKLSQSYADL 148 >01_03_0007 - 11578510-11578868,11579144-11579213 Length = 142 Score = 29.1 bits (62), Expect = 9.5 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +2 Query: 626 GYCLWNSYREQYRCQNDADYGV-VWRRFGSRRTRYIG 733 G+ LW E+ R + D DYGV R+ G RRT IG Sbjct: 94 GWRLWGGVVEEGR-EEDGDYGVKSSRKGGRRRTEIIG 129 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,024,108 Number of Sequences: 37544 Number of extensions: 608676 Number of successful extensions: 1830 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1743 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1828 length of database: 14,793,348 effective HSP length: 85 effective length of database: 11,602,108 effective search space used: 4780068496 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -