Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_H11_e472_15.seq
(1495 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032649-4|CAA21703.2| 511|Caenorhabditis elegans Hypothetical ... 38 0.018
AL032649-3|CAA21702.2| 502|Caenorhabditis elegans Hypothetical ... 38 0.018
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 36 0.074
Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 35 0.17
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 35 0.17
Z49908-1|CAA90093.1| 816|Caenorhabditis elegans Hypothetical pr... 33 0.52
DQ342049-1|ABC69941.1| 830|Caenorhabditis elegans STIP protein. 33 0.52
Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical pr... 32 0.91
U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical pr... 32 0.91
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 32 1.2
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 31 2.1
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 30 3.7
U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical pr... 30 4.9
Z66524-3|CAB54303.1| 475|Caenorhabditis elegans Hypothetical pr... 29 6.4
>AL032649-4|CAA21703.2| 511|Caenorhabditis elegans Hypothetical
protein Y55D9A.2b protein.
Length = 511
Score = 37.9 bits (84), Expect = 0.018
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 657 SIAAKMMQIMGWSGG-GLGVDEQGISEPIKPNLQMVKRAGLGSNVK 791
++ K+++ MGWS G GLG ++QG EP+ ++ R GLG+N K
Sbjct: 435 NVGFKLLKSMGWSEGQGLGKEKQGHVEPVATEVKN-NRKGLGANEK 479
>AL032649-3|CAA21702.2| 502|Caenorhabditis elegans Hypothetical
protein Y55D9A.2a protein.
Length = 502
Score = 37.9 bits (84), Expect = 0.018
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 657 SIAAKMMQIMGWSGG-GLGVDEQGISEPIKPNLQMVKRAGLGSNVK 791
++ K+++ MGWS G GLG ++QG EP+ ++ R GLG+N K
Sbjct: 435 NVGFKLLKSMGWSEGQGLGKEKQGHVEPVATEVKN-NRKGLGANEK 479
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 35.9 bits (79), Expect = 0.074
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 657 SIAAKMMQIMGWSGG-GLGVDEQGISEPIKPNLQMVKRAGLGSN 785
++A ++M MG G GLG QGISEPI + Q R GLG N
Sbjct: 88 TVAERLMAAMGHKAGEGLGKHGQGISEPIASSTQR-GRTGLGHN 130
>Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 34.7 bits (76), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 666 AKMMQIMGWSGGGLGVDEQGISEPI 740
A++M MGW G GLG +E GI +P+
Sbjct: 609 AQLMAKMGWGGKGLGANESGIVDPV 633
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 34.7 bits (76), Expect = 0.17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 666 AKMMQIMGWSGGGLGVDEQGISEPI 740
A++M MGW G GLG +E GI +P+
Sbjct: 609 AQLMAKMGWGGKGLGANESGIVDPV 633
>Z49908-1|CAA90093.1| 816|Caenorhabditis elegans Hypothetical
protein C07E3.1a protein.
Length = 816
Score = 33.1 bits (72), Expect = 0.52
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 669 KMMQIMGWSGG-GLGVDEQGISEPIKPNLQ 755
KMMQ MG+ G GLG QGI EP++ L+
Sbjct: 145 KMMQAMGYKPGEGLGAQGQGIVEPVQAQLR 174
>DQ342049-1|ABC69941.1| 830|Caenorhabditis elegans STIP protein.
Length = 830
Score = 33.1 bits (72), Expect = 0.52
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 669 KMMQIMGWSGG-GLGVDEQGISEPIKPNLQ 755
KMMQ MG+ G GLG QGI EP++ L+
Sbjct: 159 KMMQAMGYKPGEGLGAQGQGIVEPVQAQLR 188
>Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical
protein T23G7.3 protein.
Length = 339
Score = 32.3 bits (70), Expect = 0.91
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 651 ESSIAAKMMQIMGWS-GGGLGVDEQGISEPIKPNLQMVKRAGLGSN 785
+ ++ K+M+ MGWS G GLG + QG ++ +K R GLG++
Sbjct: 26 DQKLSKKLMEKMGWSEGDGLGRNRQGNADSVKLKANTSGR-GLGAD 70
>U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical
protein C10A4.5 protein.
Length = 368
Score = 32.3 bits (70), Expect = 0.91
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 75 EAPVKSARIAFVPSSD-----NDSSHTTNEDNEGQTKPEIETQNIEITKQLQEQKYPEKA 239
+APV+ + A + S D N+ S TNE+N+G T + + +N E + +
Sbjct: 234 QAPVQESNEASIESRDPIHSRNNRSSNTNENNDGNTNDQTDYENKETDNERSGNETTSNL 293
Query: 240 DSNQ 251
+NQ
Sbjct: 294 SANQ 297
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 111 PSSDNDSSHTTNEDNEGQTKPEIETQNIE-ITKQLQEQK-YPEKADSNQYLE 260
P +D SSHT + + + IE++N+E IT+ QK + E ADS LE
Sbjct: 422 PENDRQSSHTFDGNESVSSMSAIESENVELITRLATLQKIHSENADSILQLE 473
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical protein
ZK688.5b protein.
Length = 1595
Score = 31.1 bits (67), Expect = 2.1
Identities = 28/118 (23%), Positives = 41/118 (34%), Gaps = 1/118 (0%)
Frame = -1
Query: 826 SFNAARRXWCMPFTLLPRPARFTICKLGLMGS-DIPCSSTPKPPPDHPXXXXXXXXXXXX 650
S +A W + + P P + + L GS D P STP PP P
Sbjct: 938 STSAGPPGWPIRQVVSPTPTTRGLFEFDLSGSSDQPARSTPSPPAPTPRTTSAPATVQSS 997
Query: 649 XAVPKTVSSLGPETSLTLILESPCAIHCSFTTTLTIDSLNLFQATVSTALRASNLVSP 476
+++ P +ESP AI + ++ AT + L S SP
Sbjct: 998 PTRQESMDIDSPNVQNPGHVESPAAIAARQAARVARARIDHLAATFNGDLADSRRQSP 1055
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical protein
ZK688.5a protein.
Length = 1620
Score = 31.1 bits (67), Expect = 2.1
Identities = 28/118 (23%), Positives = 41/118 (34%), Gaps = 1/118 (0%)
Frame = -1
Query: 826 SFNAARRXWCMPFTLLPRPARFTICKLGLMGS-DIPCSSTPKPPPDHPXXXXXXXXXXXX 650
S +A W + + P P + + L GS D P STP PP P
Sbjct: 938 STSAGPPGWPIRQVVSPTPTTRGLFEFDLSGSSDQPARSTPSPPAPTPRTTSAPATVQSS 997
Query: 649 XAVPKTVSSLGPETSLTLILESPCAIHCSFTTTLTIDSLNLFQATVSTALRASNLVSP 476
+++ P +ESP AI + ++ AT + L S SP
Sbjct: 998 PTRQESMDIDSPNVQNPGHVESPAAIAARQAARVARARIDHLAATFNGDLADSRRQSP 1055
>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical
protein F54F12.1 protein.
Length = 1217
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +3
Query: 597 SVRDVSGPSEDTVFGTAIESSIAAKMMQIMGWSGGGLGVDEQGISEPIKPNLQMVKRAGL 776
S+R +S PSE+ + + I S + K +Q+ G + E P+ Q + L
Sbjct: 461 SIRSLSNPSENAIVNSVISSQPSLKSLQVSGTGFKNVTSPEALALNGSLPDSQ-ISAFNL 519
Query: 777 GSNVKGMHXLRR 812
G V+G+ +++
Sbjct: 520 GMAVQGLSQIKK 531
>U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical
protein ZC196.4 protein.
Length = 468
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +3
Query: 120 DNDSSHTTNEDNEGQTKPEIETQNIEITKQLQEQKYPEKADSNQYLEEMLKMKCLDMRCF 299
+ D S E+ G+ ++E QN +K L+E + + + E++ KM+ +CF
Sbjct: 199 EQDDSEKECEEQNGEFLEKLENQNKVNSKLLKEARRKREKRRRELQEDLEKMRQNQKQCF 258
Query: 300 K 302
+
Sbjct: 259 E 259
>Z66524-3|CAB54303.1| 475|Caenorhabditis elegans Hypothetical
protein T13H5.6 protein.
Length = 475
Score = 29.5 bits (63), Expect = 6.4
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 60 QXIRHEAPVKSARIAFVPSSDNDSSH---TTNEDNEGQTKPEIE-TQNIEITKQLQEQKY 227
Q I H A + ++++A PSS N+SS + D+ G ++ +++ T+ E+ Q +
Sbjct: 169 QSINHYAQICASKVAKAPSSTNNSSSGYLNSQYDDLGSSREKVKVTEKKEVKGQFERNSK 228
Query: 228 PEK 236
+K
Sbjct: 229 KKK 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,414,792
Number of Sequences: 27780
Number of extensions: 480400
Number of successful extensions: 1522
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4297958014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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