Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_H11_e472_15.seq
         (1495 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               29   0.10 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    25   2.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   2.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   3.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   9.0  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 29.1 bits (62), Expect = 0.10
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 660 IAAKMMQIMGWSGG-GLGVDEQGISEPIKPNLQ 755
           I AK++  MG+  G GLG   QGIS P++ +L+
Sbjct: 161 IGAKLLLQMGFEPGKGLGKQLQGISTPVEAHLR 193


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 12/62 (19%), Positives = 25/62 (40%)
 Frame = +3

Query: 564 EQWIAHGDSRISVRDVSGPSEDTVFGTAIESSIAAKMMQIMGWSGGGLGVDEQGISEPIK 743
           + W+A+ +S +     +   +  V+G   +  +AA+  Q    + G          +P  
Sbjct: 86  DDWLANANSPVGSPSAALQPQHVVYGNPQQQQLAAETQQQQQHNNGYASPMSTSSYDPYS 145

Query: 744 PN 749
           PN
Sbjct: 146 PN 147


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 638  WNSYREQYRCQNDADYGVVWRRFGSRR 718
            W+    + + + D +YG VW  FG R+
Sbjct: 984  WHHRLAEIKRRPDLEYGKVWLFFGCRQ 1010


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 730  DIPCSSTPKPPPDHP 686
            +IP S +P+PPP  P
Sbjct: 1850 NIPVSGSPEPPPPPP 1864


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +3

Query: 129 SSHTTNEDNEGQTKPEIETQNIEITKQLQEQKY 227
           ++H  N+D E   + EIE+ N +     +E+ +
Sbjct: 64  NNHHCNQDTEKLNQLEIESDNSKEVNDKKEENF 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,383
Number of Sequences: 438
Number of extensions: 6136
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 52156500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)