BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030905E5_H11_e472_15.seq (1495 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 29 0.10 AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 25 2.2 AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 24 2.9 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 3.9 AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 9.0 >DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. Length = 828 Score = 29.1 bits (62), Expect = 0.10 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Frame = +3 Query: 660 IAAKMMQIMGWSGG-GLGVDEQGISEPIKPNLQ 755 I AK++ MG+ G GLG QGIS P++ +L+ Sbjct: 161 IGAKLLLQMGFEPGKGLGKQLQGISTPVEAHLR 193 >AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A isoform protein. Length = 567 Score = 24.6 bits (51), Expect = 2.2 Identities = 12/62 (19%), Positives = 25/62 (40%) Frame = +3 Query: 564 EQWIAHGDSRISVRDVSGPSEDTVFGTAIESSIAAKMMQIMGWSGGGLGVDEQGISEPIK 743 + W+A+ +S + + + V+G + +AA+ Q + G +P Sbjct: 86 DDWLANANSPVGSPSAALQPQHVVYGNPQQQQLAAETQQQQQHNNGYASPMSTSSYDPYS 145 Query: 744 PN 749 PN Sbjct: 146 PN 147 >AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase protein. Length = 1143 Score = 24.2 bits (50), Expect = 2.9 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +2 Query: 638 WNSYREQYRCQNDADYGVVWRRFGSRR 718 W+ + + + D +YG VW FG R+ Sbjct: 984 WHHRLAEIKRRPDLEYGKVWLFFGCRQ 1010 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 23.8 bits (49), Expect = 3.9 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -1 Query: 730 DIPCSSTPKPPPDHP 686 +IP S +P+PPP P Sbjct: 1850 NIPVSGSPEPPPPPP 1864 >AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform C protein. Length = 548 Score = 22.6 bits (46), Expect = 9.0 Identities = 9/33 (27%), Positives = 18/33 (54%) Frame = +3 Query: 129 SSHTTNEDNEGQTKPEIETQNIEITKQLQEQKY 227 ++H N+D E + EIE+ N + +E+ + Sbjct: 64 NNHHCNQDTEKLNQLEIESDNSKEVNDKKEENF 96 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 303,383 Number of Sequences: 438 Number of extensions: 6136 Number of successful extensions: 22 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 22 length of database: 146,343 effective HSP length: 61 effective length of database: 119,625 effective search space used: 52156500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -