Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_H10_e464_16.seq
(1512 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 288 3e-76
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 271 4e-71
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 203 8e-51
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 170 7e-41
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 155 2e-36
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 112 2e-23
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 112 3e-23
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 1e-22
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 109 2e-22
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 108 3e-22
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 103 1e-20
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 100 2e-19
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 98 5e-19
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 95 4e-18
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 89 2e-16
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 87 1e-15
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 86 3e-15
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 85 6e-15
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 83 2e-14
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 2e-13
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 76 2e-12
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 76 2e-12
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 73 2e-11
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 72 3e-11
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 70 1e-10
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 67 1e-09
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 62 5e-08
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 58 8e-07
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 56 3e-06
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 54 1e-05
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 54 1e-05
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 52 4e-05
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 52 5e-05
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 50 1e-04
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 49 3e-04
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 49 4e-04
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 48 5e-04
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 48 6e-04
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 48 9e-04
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 48 9e-04
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 47 0.001
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 47 0.001
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 47 0.001
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 46 0.002
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 46 0.003
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 46 0.003
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 46 0.003
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 46 0.003
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 46 0.003
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 45 0.005
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 45 0.005
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 45 0.006
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 44 0.010
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 43 0.018
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.024
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 42 0.056
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 42 0.056
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 42 0.056
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 42 0.056
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 41 0.074
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 41 0.074
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 41 0.098
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 40 0.13
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 40 0.13
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 40 0.13
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 40 0.23
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 40 0.23
UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 - Ba... 40 0.23
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.23
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 39 0.39
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 39 0.39
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 38 0.69
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.69
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.69
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 37 1.2
UniRef50_O39307 Cluster: 71; n=7; Equid herpesvirus 4|Rep: 71 - ... 37 1.6
UniRef50_A4CJK3 Cluster: Regulatory protein, LuxR:Response regul... 37 1.6
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 36 2.1
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 36 2.8
UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2... 36 2.8
UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1; Th... 34 8.5
UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2... 34 8.5
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 288 bits (706), Expect = 3e-76
Identities = 131/158 (82%), Positives = 145/158 (91%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSV 605
GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKK V
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVV 158
Score = 166 bits (404), Expect = 1e-39
Identities = 75/80 (93%), Positives = 77/80 (96%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGG
Sbjct: 155 KKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGG 214
Query: 775 NHQHIGKASTVKRGTSAGRK 834
NHQHIGKASTVKRGTSAGRK
Sbjct: 215 NHQHIGKASTVKRGTSAGRK 234
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 271 bits (664), Expect = 4e-71
Identities = 123/159 (77%), Positives = 141/159 (88%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KK ++
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Score = 151 bits (365), Expect = 6e-35
Identities = 69/102 (67%), Positives = 76/102 (74%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGG
Sbjct: 155 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 214
Query: 775 NHQHIGKASTVKRGTSAGRKXXXXXXXXXXXXXXXKTDXKKE 900
NHQHIGK ST++R AGRK KT +KE
Sbjct: 215 NHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKE 256
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 203 bits (496), Expect = 8e-51
Identities = 100/158 (63%), Positives = 118/158 (74%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
V FRDPYK+K R E FIA EG+YTGQF+YCGKKA L++
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMYTGQFIYCGKKANLQI---------------------- 98
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSV 605
RG+LARASGN+ATVI HNPD K++RVKLPSG+KK +
Sbjct: 99 --RGKLARASGNYATVISHNPDTKKSRVKLPSGSKKVI 134
Score = 162 bits (394), Expect = 2e-38
Identities = 71/80 (88%), Positives = 76/80 (95%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+PS+NR +VGIVAGGGRIDKP+LKAGRAYHKYK KRNCWP VRGVAMNPVEHPHGGG
Sbjct: 131 KKVIPSANRAIVGIVAGGGRIDKPMLKAGRAYHKYKAKRNCWPKVRGVAMNPVEHPHGGG 190
Query: 775 NHQHIGKASTVKRGTSAGRK 834
NHQHIGKASTV+R TSAGRK
Sbjct: 191 NHQHIGKASTVRRDTSAGRK 210
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 170 bits (414), Expect = 7e-41
Identities = 78/126 (61%), Positives = 98/126 (77%), Gaps = 1/126 (0%)
Frame = +3
Query: 255 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 434
+G+VK I HDPGRGAPLA V FR+P ++ KELFI EGLY+GQ++YCG KA+L +GNV
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92
Query: 435 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK-KSVTI 611
+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN D + TR++LPSGAK KS+
Sbjct: 93 LPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRLPSGAKHKSMWH 152
Query: 612 KQQRHG 629
R G
Sbjct: 153 VDMRRG 158
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 155 bits (377), Expect = 2e-36
Identities = 75/123 (60%), Positives = 90/123 (73%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
V FR P++FK +KELF+ E +YCGKKATL VGNV+P+ ++PEG + +
Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHV 120
Query: 492 GDR 500
G R
Sbjct: 121 GYR 123
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 112 bits (270), Expect = 2e-23
Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Frame = +3
Query: 132 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 308
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 309 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 488
+ + +F A EGLY GQ V GK A+ + GN+M +G +PEGT++ N+E++
Sbjct: 57 KIVTENGVEFFN-----YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKR 111
Query: 489 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 590
GD G+ ARA G +A VIG P+ +T ++LPSG
Sbjct: 112 AGDGGKFARAGGTYAVVIGQKPEENKTIIRLPSG 145
Score = 82.6 bits (195), Expect = 2e-14
Identities = 37/61 (60%), Positives = 44/61 (72%)
Frame = +1
Query: 610 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 789
S R VGIVAGGGRI+KP LKAG+ YH+ + K +P VRG AM+P HPHGGG+HQ
Sbjct: 152 SRGRATVGIVAGGGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKG 211
Query: 790 G 792
G
Sbjct: 212 G 212
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 112 bits (269), Expect = 3e-23
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Frame = +3
Query: 132 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 308
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 309 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 488
V F D + L + PEG G + CG A ++ GN +P+ +PEG + N+E +
Sbjct: 61 RVRFEDG-----EERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQ 115
Query: 489 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 590
GD G+ ARA G +AT+I H D RT V+LPSG
Sbjct: 116 PGDGGKFARAPGCYATIIAH--DVGRTYVQLPSG 147
Score = 91.5 bits (217), Expect = 5e-17
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +1
Query: 619 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 798
R +G+++GGG+ +KP +KAG+ Y+ + K WP VRGVAMN V+HP GGGNHQ GK
Sbjct: 157 RATIGVMSGGGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKP 216
Query: 799 STVKRGTSAGRK 834
+T+ RG GRK
Sbjct: 217 TTIARGDPPGRK 228
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 1e-22
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +3
Query: 144 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 323
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 324 DPYKFKTRK 350
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 109 bits (262), Expect = 2e-22
Identities = 49/79 (62%), Positives = 58/79 (73%)
Frame = +1
Query: 598 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGN 777
K +P+ +R +GI AG GRI+KPI+KAG AYHK+KVK WP VRGVAMN V+HP GGG
Sbjct: 146 KEVPNDSRATIGIPAGAGRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGR 205
Query: 778 HQHIGKASTVKRGTSAGRK 834
HQH G+ STV R GRK
Sbjct: 206 HQHKGRPSTVARTAPPGRK 224
Score = 101 bits (242), Expect = 5e-20
Identities = 63/159 (39%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Frame = +3
Query: 132 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 308
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 309 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 488
V D +F L A EG+Y GQ + G A E GN++P+G +PEGT V N+E +
Sbjct: 57 RVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELR 111
Query: 489 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSV 605
GD G+LAR +G++A V+G +T ++LPSG K V
Sbjct: 112 PGDGGKLARQAGSYALVVGR--AGAKTILRLPSGKDKEV 148
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 108 bits (260), Expect = 3e-22
Identities = 57/152 (37%), Positives = 84/152 (55%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
+ F FK EL+IA E LY + + CG +A GNV+P+ +P G VCN+EEK
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKE 146
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPS 587
GD G+LAR++G F V+ H+ T++KLPS
Sbjct: 147 GDGGKLARSAGAFVGVLSHSKYNNVTKLKLPS 178
Score = 89.4 bits (212), Expect = 2e-16
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +1
Query: 598 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGN 777
K+L S R +G+VAGGG+ +KP+LKAG+ Y+K+K +P V+ + HPHGGGN
Sbjct: 182 KILSSFCRATIGVVAGGGKYEKPLLKAGKNYYKFKSLNKKYPIVKIFYLGKENHPHGGGN 241
Query: 778 HQHIGKASTVKRGTSAGRK 834
HQHIG STV R + G+K
Sbjct: 242 HQHIGHPSTVSRRSPPGQK 260
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 103 bits (247), Expect = 1e-20
Identities = 46/75 (61%), Positives = 54/75 (72%)
Frame = +1
Query: 610 SSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHI 789
S+ R +VG+VAGGG +KP+LKAG Y KYKVK WP+VRGVAMN V HPHGGG HQ +
Sbjct: 149 SNARAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSV 208
Query: 790 GKASTVKRGTSAGRK 834
+ STV R GRK
Sbjct: 209 SRPSTVSRNAPPGRK 223
Score = 95.5 bits (227), Expect = 3e-18
Identities = 57/153 (37%), Positives = 86/153 (56%), Gaps = 1/153 (0%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 308
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 309 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 488
++ D KF + +GL GQ + GK A + GN++ VG +PEGTI+ N+E+
Sbjct: 56 LIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKT 110
Query: 489 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 587
GD G+ AR++G + V+G D + VKL S
Sbjct: 111 RGDGGKFARSAGTYGVVVGKTGD--KVLVKLSS 141
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 99.5 bits (237), Expect = 2e-19
Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 1/154 (0%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MG+ + +Q +G G+ K LR + + ++G V I HDP R AP+A
Sbjct: 1 MGKRLISQNRGRGTP-TYRAPSHKYKADLRH-PRVDENSSLRGEVVGIEHDPARSAPIAK 58
Query: 312 VHFRDPYKFKTRKELFI-APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 488
V F+ +ELF+ A EG+ G + CG A ++ GN++P+G +PEG +CN+E K
Sbjct: 59 V------AFENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESK 112
Query: 489 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 590
D G+ R+SG +ATV+ H +A RT V +PSG
Sbjct: 113 PNDGGKFVRSSGVYATVVTH--EATRTAVSMPSG 144
Score = 87.8 bits (208), Expect = 6e-16
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +1
Query: 619 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 798
R +VGIVAG GR+D+P LKAG+ YHK K + +P V VAMNP +HP GGG +H GK
Sbjct: 154 RAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKP 213
Query: 799 STVKRGTSAGRK 834
+TV R GRK
Sbjct: 214 TTVSRNAPPGRK 225
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 98.3 bits (234), Expect = 5e-19
Identities = 44/79 (55%), Positives = 53/79 (67%)
Frame = +1
Query: 598 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGN 777
K + + R +GI AG GR +KP+LKAG AY+K+K K WP VRGVAMN V HPHGGGN
Sbjct: 150 KQVNAKARATIGIAAGAGRDEKPLLKAGNAYYKWKAKAKKWPVVRGVAMNAVNHPHGGGN 209
Query: 778 HQHIGKASTVKRGTSAGRK 834
HQ G +TV R G+K
Sbjct: 210 HQSPGYPTTVARNAPPGQK 228
Score = 88.6 bits (210), Expect = 4e-16
Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAP-KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 308
MG+ +R QR G G+ + + AP + S + + +G V ++ HDPGR PLA
Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60
Query: 309 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 488
+ + F A EG+YTGQ V G A GN++P+ A+PEGT + N+E +
Sbjct: 61 HIVIPNVADF-----WIPAAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIR 115
Query: 489 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVTIK 614
GD G+LAR+ G +A ++G + ++ ++LPSG K V K
Sbjct: 116 PGDGGKLARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAK 155
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 95.1 bits (226), Expect = 4e-18
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = +1
Query: 595 KKVLPSSN-RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 771
KK+ SS R +VG+VAGGG DKP+LKA A++K K + + +P VRGVAMNPVEH HGG
Sbjct: 140 KKLTVSSECRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGG 199
Query: 772 GNHQHIGKASTVKR 813
GNHQH+GK +TV +
Sbjct: 200 GNHQHVGKPTTVSK 213
Score = 87.8 bits (208), Expect = 6e-16
Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
Frame = +3
Query: 192 KKRKGAPKLR-SLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAP 368
KK++ P ++ L Y +G V DI+H+ RGAP+A++ F++ + A
Sbjct: 12 KKKQRQPIVKVCLSYPIIPQVEEGEVIDIVHERSRGAPVAIISFKED------DCMVPAS 65
Query: 369 EGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 548
EG+YTGQ + G A +++GN+ + +PEG V ++E GD G A +G+++ V+ H
Sbjct: 66 EGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNH 125
Query: 549 NPDAKRTRVKLPSGAKKSVT 608
+ T +K+PSG K +V+
Sbjct: 126 RKETNETVIKIPSGKKLTVS 145
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 89.4 bits (212), Expect = 2e-16
Identities = 42/97 (43%), Positives = 59/97 (60%)
Frame = -1
Query: 906 LCFFLXVSLTTTDSSCSTRSNETXLATSRGSSLDSRSFTNMLMVTTTMRMLNGVHSNTTY 727
L FL SL ++++ C SNET SRG S D R F N+L+V T+ ML+ VH +T +
Sbjct: 1 LVLFLLHSLGSSETPCPASSNETHFPASRGISADGRGFANVLVVATSKGMLHRVHGHTPH 60
Query: 726 IWPAVAFHFVFVISTPSLQDGLVNTTTTRDNTNHASV 616
WPA+ + VI T LQ+GLVN T+ +T+H+ V
Sbjct: 61 AWPAIPLGLILVIGTAGLQNGLVNAATSSHHTDHSPV 97
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 87.0 bits (206), Expect = 1e-15
Identities = 44/73 (60%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 619 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPY-VRGVAMNPVEHPHGGGNHQHIGK 795
R VG+VA G ID PILKAG H + K PY VRGVAMN V HPHGGGNHQH+G+
Sbjct: 148 RATVGVVAASGIIDAPILKAGTHVHYLRSKAKR-PYTVRGVAMNAVNHPHGGGNHQHVGR 206
Query: 796 ASTVKRGTSAGRK 834
STV R GRK
Sbjct: 207 PSTVGRNAPPGRK 219
Score = 77.4 bits (182), Expect = 9e-13
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL-- 51
Query: 312 VHFRDPYKFKTRKELF-IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 488
+ D T K+++ IA G Y GQ + G T+ G + +P+G+ V N+E
Sbjct: 52 LELVD----STGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESS 107
Query: 489 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 599
GD G R++G FA V+ H R +KLPSG+ +
Sbjct: 108 PGDGGEFCRSAGTFALVVSH---GSRVTLKLPSGSMR 141
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 85.8 bits (203), Expect = 3e-15
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +1
Query: 604 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 783
L NR M+G +AGGG ++P + AG + +K K +P VRGVA HPHGGG HQ
Sbjct: 150 LNPKNRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQ 209
Query: 784 HIGKASTVKRGTSAGRK 834
H+G++STV R T G K
Sbjct: 210 HVGQSSTVSRDTPPGAK 226
Score = 81.4 bits (192), Expect = 6e-14
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 305
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 306 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 485
A V F D A G G+ + G K+ +E GNV+ + +P+GTIVCN+E+
Sbjct: 58 AKVRFEDG-----SVSFVPAVLGAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEK 112
Query: 486 KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 590
GD G + +++G ATV H + VKLPSG
Sbjct: 113 HFGDGGAIVKSAGTDATVFSHGDEG--VTVKLPSG 145
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 84.6 bits (200), Expect = 6e-15
Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 2/161 (1%)
Frame = +3
Query: 132 MGRV-IRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 305
MG+V + QR+G GS F S T + G K+ + D G + ++KD IH APL
Sbjct: 1 MGKVRLLVQRRGRGSPTFRSPTHRAAGKVKIPTFDGDLVKGKVVALIKDSIHY----APL 56
Query: 306 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 485
VV + + + L AP G+ G VY GK+A +G++ P+ +PEGT + LE
Sbjct: 57 MVVKWENG-----AQSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLEN 111
Query: 486 KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
GD G+L RASG+FA ++ D + V+LPSG K+++
Sbjct: 112 NPGDGGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTLS 150
Score = 73.3 bits (172), Expect = 1e-11
Identities = 32/79 (40%), Positives = 45/79 (56%)
Frame = +1
Query: 598 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGN 777
K L ++ R ++G++AGGGR +KP +KAG Y+ + WP V GV N +HP GG
Sbjct: 147 KTLSANARAVIGVIAGGGRKEKPFVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKR 206
Query: 778 HQHIGKASTVKRGTSAGRK 834
H + K TV + GRK
Sbjct: 207 HSNHSKPFTVSKWAPPGRK 225
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 82.6 bits (195), Expect = 2e-14
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +1
Query: 604 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 783
L NR MVG +AGGG ++P + AG + +++ K +P VRGVA HPHGGG HQ
Sbjct: 149 LNPKNRAMVGTLAGGGVSERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQ 208
Query: 784 HIGKASTVKRGTSAGRK 834
H+G++STV R G K
Sbjct: 209 HVGQSSTVSRNAPPGAK 225
Score = 75.4 bits (177), Expect = 4e-12
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 308
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 309 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 488
+ F D L G G + G K+ + GNV+ V +P+GT VCN+E+
Sbjct: 58 KIRFEDGIVSYVPAVL-----GTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKH 112
Query: 489 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVTIKQQ 620
GD G + +++G ATV H +KLPSG ++ K +
Sbjct: 113 YGDGGAIVKSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPKNR 154
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 2e-13
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 269
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 76.2 bits (179), Expect = 2e-12
Identities = 46/153 (30%), Positives = 78/153 (50%)
Frame = +3
Query: 147 RAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 326
+A R G + H K K R +D+ + G + I +DP R A + +V++ D
Sbjct: 41 KAGRNNRGLITTRH-KGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLD 99
Query: 327 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGR 506
K R LF +G+ G + + A ++VGN P+ +PEGT++ N+E K G G+
Sbjct: 100 GEK---RYILFA--KGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQ 154
Query: 507 LARASGNFATVIGHNPDAKRTRVKLPSGAKKSV 605
+AR++G ++G + D K ++L SG + V
Sbjct: 155 MARSAGTSVQILGKDDDGKYVTLRLTSGEVRKV 187
Score = 38.3 bits (85), Expect = 0.52
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +1
Query: 700 KVKRNCW----PYVRGVAMNPVEHPHGGG-NHQHIGKASTV 807
K RN W P VRG MNP +HPHGGG IG+ S V
Sbjct: 210 KAGRNRWRGIRPTVRGSVMNPNDHPHGGGEGRTPIGRKSPV 250
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 76.2 bits (179), Expect = 2e-12
Identities = 52/156 (33%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Frame = +3
Query: 150 AQRKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 323
A R G + V H R G K R +D+ + VK I +DP R A +A++ +
Sbjct: 41 AGRNSYGHITVRH---RGGGHKQQYRLVDFKRIKDEVPATVKAIEYDPNRTANIALLVYA 97
Query: 324 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 503
D K +AP+GL G V G +A ++VGN +P+ +P GT++ N+E K G G
Sbjct: 98 DGVK-----SYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGG 152
Query: 504 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVTI 611
+LAR++G A ++G + K V+L SG + V +
Sbjct: 153 QLARSAGTSAQLLG--KEGKYAIVRLSSGEVRLVLL 186
Score = 36.3 bits (80), Expect = 2.1
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +1
Query: 673 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KAGR +++ KR P VRG MNP +HPHGGG
Sbjct: 207 KAGRT--RWQGKR---PTVRGSVMNPNDHPHGGG 235
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 72.9 bits (171), Expect = 2e-11
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = +3
Query: 159 KGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 332
KG + + + R G K R +D+ I G + I +DP R A + ++H+ D
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 333 KFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLA 512
K + P G G + G + +++GN +P+ MP GT + N+E +G G+LA
Sbjct: 98 ----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLA 153
Query: 513 RASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
RA+G A +I + K +KLPSG + ++
Sbjct: 154 RAAGAVAKLIA--KEGKSATLKLPSGEVRLIS 183
Score = 41.5 bits (93), Expect = 0.056
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +1
Query: 715 CW----PYVRGVAMNPVEHPHGGG 774
CW P VRGV MNPV+HPHGGG
Sbjct: 210 CWLGKRPVVRGVVMNPVDHPHGGG 233
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 72.1 bits (169), Expect = 3e-11
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Frame = +3
Query: 129 TMGRVIRAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPL 305
T+G R R AG + V H K G +L R +D+ ++G ++ + +DP R A +
Sbjct: 59 TVGLRKRGGRNNAGRITVWH--KGGGHKRLYRVIDFKRDLTGVRGTIRRLEYDPNRSAHI 116
Query: 306 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 485
A+V Y+ +AP G G + G ++ ++VGN +P+ +P T + N+E
Sbjct: 117 ALVD----YEGGNASRYVLAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIEL 172
Query: 486 KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSV 605
G G+L R++G+ AT++ D V+LPSG ++ V
Sbjct: 173 VPGRGGQLCRSAGSAATLVKKADDGGYCVVRLPSGEQRLV 212
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 70.1 bits (164), Expect = 1e-10
Identities = 40/130 (30%), Positives = 70/130 (53%)
Frame = +3
Query: 219 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 398
R +D+ R + G V+ + +DP R A +A++ + D +AP+ L G V
Sbjct: 63 RFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVV 117
Query: 399 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 578
G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D ++
Sbjct: 118 AGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAILR 175
Query: 579 LPSGAKKSVT 608
L SG ++ V+
Sbjct: 176 LNSGEQRLVS 185
Score = 44.8 bits (101), Expect = 0.006
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +1
Query: 673 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 792
KAGR+ ++ KR P+VRGVAMNPV+HPHGGG + G
Sbjct: 207 KAGRSV--WRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 67.3 bits (157), Expect = 1e-09
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Frame = +3
Query: 147 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 323
+ + + G++ H + G KL R +D+ + V I +DP R A + ++H+
Sbjct: 56 KGRSRQRGNITARH--RGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYA 113
Query: 324 DPYKFKTRKELFIAPEGLYTGQFVY--------CGKKAT-LEVGNVMPVGAMPEGTIVCN 476
D K I PEGL G V GK ++ GN MP+ +PEGTIV N
Sbjct: 114 DG-----EKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHN 168
Query: 477 LEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSV 605
+E G G++ARA+G +A V+G + V++PSG + +
Sbjct: 169 IEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMI 211
Score = 41.9 bits (94), Expect = 0.042
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 721 PYVRGVAMNPVEHPHGGGNHQHIGK 795
P+ RG AMNPV+HPHGGG + GK
Sbjct: 245 PHTRGTAMNPVDHPHGGGEGRTRGK 269
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 61.7 bits (143), Expect = 5e-08
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +3
Query: 156 RKGAGSVFVSHTKKRKGAPKLRSLDYAERH-GYIKGVVKDIIHDPGRGAPLAVVHFRDPY 332
R G + V H R K R +D+ H I+ VK I +DP R ++++ + +
Sbjct: 47 RNNQGKITVRHQGGRNKR-KYRIIDFKRTHYDNIEATVKSIEYDPNRSCFVSLITYANG- 104
Query: 333 KFKTRKELFIAPEGLYTGQFVYCGKKAT-LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 509
K I+P+G+ G + + ++ G MP+ +PEGT V N+E G++
Sbjct: 105 ----AKSYIISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQI 160
Query: 510 ARASGNFATVIGHNPDAKRTRVKLPSG 590
AR++G++A ++G + K ++L SG
Sbjct: 161 ARSAGSYARILGQDETGKYVILQLLSG 187
Score = 41.1 bits (92), Expect = 0.074
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +1
Query: 619 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
R VG+V+ I KAGR H R P VRG AMNP +HPHGGG
Sbjct: 197 RATVGVVSNLDHNLVVIGKAGRNRH-----RGIRPTVRGSAMNPNDHPHGGG 243
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 57.6 bits (133), Expect = 8e-07
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Frame = +3
Query: 189 TKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 362
T+ + G K R +D+ I V+ I +DP R A +A+V +RD + +
Sbjct: 57 TRHKGGGHKQFYRIVDFKRDKIDIPARVERIEYDPNRTAYIALVLYRDG-----ERRYIV 111
Query: 363 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 542
AP GL G + G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++
Sbjct: 112 APAGLSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLV 171
Query: 543 GHNPDAKRTRVKLPSGAKKSV 605
+ + +++ SG + V
Sbjct: 172 A--KEGEYATLRMRSGEMRKV 190
Score = 42.3 bits (95), Expect = 0.032
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +1
Query: 709 RNCWPYVRGVAMNPVEHPHGGGNHQHIG 792
R P VRGVAMNPV+HPHGGG + G
Sbjct: 220 RGVRPTVRGVAMNPVDHPHGGGEGRTSG 247
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 55.6 bits (128), Expect = 3e-06
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Frame = +3
Query: 156 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 329
R +G V V H R G K +R +D+A R VV+ I HDPGR A +A+V ++
Sbjct: 108 RNNSGRVTVRH---RGGGHKRRIRMVDFA-RDAPGPHVVERIEHDPGRSAHIALVRSQET 163
Query: 330 YKFKTRKELFIAPEGLYTGQFVYCGKKATLEV---------------------GNVMPVG 446
K +A EG+ G V+ E GN +P+
Sbjct: 164 KKLS----YILAAEGMRAGDVVHSYMSGIPEELWKSMGGTVDPGVLAARTAWRGNCLPLH 219
Query: 447 AMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 590
MP GT+V N+ + G G+L R++G FATVI ++ ++L SG
Sbjct: 220 MMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSG 267
Score = 38.3 bits (85), Expect = 0.52
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +1
Query: 628 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 792
VG+ + + + KAGR+ N P VRG+AMN EHPHGGG + G
Sbjct: 280 VGVASNPNHQYRQLGKAGRSRWL-----NIRPTVRGLAMNAAEHPHGGGRGKSKG 329
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 54.0 bits (124), Expect = 1e-05
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Frame = +3
Query: 159 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 338
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLD---- 72
Query: 339 KTRKELFIAPEGLYTGQFVYCG-KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 515
K I L FV K +L GN + + GT++ +E G +R
Sbjct: 73 -GEKRYIIKTNNLEISNFVVSSLNKISLNSGNSTIIKNINIGTLINCVEIFPKIGGIFSR 131
Query: 516 ASGNFATVIGHNPDAKRTRVKLPSGAKKSVTI 611
+SG+ + +I D K +KLPSG KK +++
Sbjct: 132 SSGSESEII--FKDNKFGVIKLPSGIKKKISL 161
Score = 45.2 bits (102), Expect = 0.005
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +1
Query: 697 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 792
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWRGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 53.6 bits (123), Expect = 1e-05
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +3
Query: 156 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 329
R+G + + ++ R G K R +D + G + + +DP R A ++ VH D
Sbjct: 40 RRGRNNRGIVTSRHRGGGHKRPYRHIDPRRSKRGVPGRIITVEYDPNRSAYISPVHHGDG 99
Query: 330 YKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 509
K PEG+ G + G A VGN P MP GT++ +E G G+
Sbjct: 100 -----DKGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQS 154
Query: 510 ARASGNFATVIGHNPDAKRTRVKLPSGAKKSV 605
ARA+G A + + +R LP G +S+
Sbjct: 155 ARAAGAPAKPVAKEGQSATSR--LPPGEVRSI 184
Score = 41.5 bits (93), Expect = 0.056
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +1
Query: 634 IVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
+V G +D +G+A K P VRGV MNPV+HPHGGG
Sbjct: 191 VVGQAGNVDSKNRASGKAGSKRWPGSR--PRVRGVVMNPVDHPHGGG 235
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 52.0 bits (119), Expect = 4e-05
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +3
Query: 360 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 539
+A L G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +
Sbjct: 199 LASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQL 258
Query: 540 I-GHNPDAKRTRVKLPSGAKKSVTIK 614
I HN K ++LPSG KS ++
Sbjct: 259 IKKHN---KYAILRLPSGELKSFPLQ 281
Score = 45.6 bits (103), Expect = 0.003
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +1
Query: 598 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGN 777
K P +GIV+ + + KAG + ++ +R P VRGVAMNP++HPHGGG
Sbjct: 276 KSFPLQCMATIGIVSNLNHFNTDLKKAGAS--RWLGRR---PTVRGVAMNPIDHPHGGGE 330
Query: 778 HQHIGKASTV 807
+ G +V
Sbjct: 331 GRTSGGRPSV 340
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 51.6 bits (118), Expect = 5e-05
Identities = 22/63 (34%), Positives = 40/63 (63%)
Frame = +3
Query: 417 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 596
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 597 KSV 605
+ V
Sbjct: 272 RYV 274
Score = 40.3 bits (90), Expect = 0.13
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +1
Query: 673 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KAGR+ H+ K P VRGVAMN +HPHGGG
Sbjct: 297 KAGRSRHRGKR-----PMVRGVAMNAFDHPHGGG 325
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 50.4 bits (115), Expect = 1e-04
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
+K++ S R +GIV+ + + KAG++ ++ +R P VRGVAMNPV+HPHGGG
Sbjct: 415 EKLIDSRCRATIGIVSNPNHGARKLRKAGQS--RWSGRR---PIVRGVAMNPVDHPHGGG 469
Query: 775 NHQHIGKASTV 807
+ G +V
Sbjct: 470 EGRTKGGRPSV 480
Score = 41.5 bits (93), Expect = 0.056
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +3
Query: 420 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 599
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 600 SV 605
+
Sbjct: 417 LI 418
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 49.2 bits (112), Expect = 3e-04
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +3
Query: 423 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKS 602
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 603 V 605
+
Sbjct: 419 I 419
Score = 47.6 bits (108), Expect = 9e-04
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +1
Query: 598 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGN 777
K++ S R +GIV+ + KAG++ ++ +R P VRGVAMNPV+HPHGGG
Sbjct: 417 KLIDSRCRATIGIVSNLNHGKRKFNKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGGE 471
Query: 778 HQHIGKASTV 807
+ G +V
Sbjct: 472 GRTKGGRPSV 481
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 48.8 bits (111), Expect = 4e-04
Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Frame = +3
Query: 156 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 329
R G V V H R G K +R +D+A R +V+ I HDPGR A +A+V ++
Sbjct: 107 RNNTGRVTVRH---RGGGHKRRIRIVDFA-RTAPGPHLVERIEHDPGRSAHIALVRSQET 162
Query: 330 YKFK-------------TRKELFIAPEGLYT--GQFVYCGKKA--TLEVGNVMPVGAMPE 458
K + + PE L+ G V G A T GN +P+ +P
Sbjct: 163 QKLSYILAAEGMRAGDVVQSYMSGIPEDLWKSMGGTVDPGVLAARTAWRGNCLPLHMIPV 222
Query: 459 GTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 563
GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 223 GTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
Score = 37.1 bits (82), Expect = 1.2
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 628 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 792
VG+ + + + KAGR+ N P VRG+AMN +HPHGGG + G
Sbjct: 311 VGVASNPNHQYRQLGKAGRSRWL-----NIRPTVRGLAMNAADHPHGGGRGKSKG 360
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 48.4 bits (110), Expect = 5e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 351 ELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEG 461
E + E +YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 40 EPIVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 48.0 bits (109), Expect = 6e-04
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Frame = +3
Query: 156 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF---R 323
R AG V H + G +L R +D+ G V+ + +DP R A LA++ R
Sbjct: 102 RNAAGCVTARH--RGGGQRRLYRLVDFVRGAASPAGTVERLEYDPIRSARLALLRLDGAR 159
Query: 324 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 494
+ + T +AP G+ G V CG A + G+ +P+ A+P G + N+E + G
Sbjct: 160 EGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPGSSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 47.6 bits (108), Expect = 9e-04
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Frame = +3
Query: 150 AQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF-- 320
A R G + + H + A +L R +D+ +R+ + G V+ I +DP R + +A+V +
Sbjct: 23 AGRNSTGRITLFH--RGSHAKRLQRRIDF-QRNTSLTGKVERIEYDPNRSSWIALVRWYS 79
Query: 321 --RDPYK--FKTRKELFIAPEGLYTGQFVYCGKKA--TLE--VGNVMPVGAMPEGTIVCN 476
P TR +A + TG V + LE +GN + + +P GT++ N
Sbjct: 80 GSTQPQHQTASTRFTYILACDKFKTGSPVMNNVHSFGNLEQALGNCVQLAYIPVGTLIHN 139
Query: 477 LEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSV 605
+E G + RA+G FA +I R++LPSGA S+
Sbjct: 140 IEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALASI 180
Score = 46.4 bits (105), Expect = 0.002
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +1
Query: 589 VPKKVLPSSN---RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEH 759
+P L S N R +GIV+ + KAG++ ++ +R P VRGVAMNPV+H
Sbjct: 172 LPSGALASINSQCRATIGIVSNENHGKRNFRKAGQS--RWLGRR---PVVRGVAMNPVDH 226
Query: 760 PHGGGNHQHIGKASTV 807
PHGGG + G +V
Sbjct: 227 PHGGGEGRTKGGRRSV 242
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 47.6 bits (108), Expect = 9e-04
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +1
Query: 598 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGN 777
K++ S R VGIV+ + + KAG++ ++ +R P VRGVAMNPV+HPHGGG
Sbjct: 379 KLIDSRCRATVGIVSNLHHGKRKLDKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGGE 433
Query: 778 HQHIGKASTV 807
+ G +V
Sbjct: 434 GRTKGGRPSV 443
Score = 44.0 bits (99), Expect = 0.010
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +3
Query: 423 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKS 602
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 603 V 605
+
Sbjct: 381 I 381
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 47.2 bits (107), Expect = 0.001
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +1
Query: 598 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
K S+ R +G V ++KAG + +++ KR P VRGVAMNPV+HPHGGG
Sbjct: 158 KKFSSNCRACLGQVGNESHFLSSLMKAGES--RWRNKR---PKVRGVAMNPVDHPHGGG 211
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 47.2 bits (107), Expect = 0.001
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = +3
Query: 420 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 599
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 600 SV 605
+V
Sbjct: 353 AV 354
Score = 46.8 bits (106), Expect = 0.001
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
+K + S +GIV+ + + KAG + ++ +R P VRGVAMNPV+HPHGGG
Sbjct: 351 EKAVDSRCHATIGIVSNPSHGTRKLRKAGHS--RWLGRR---PVVRGVAMNPVDHPHGGG 405
Query: 775 NHQHIGKASTV 807
+ G +V
Sbjct: 406 EGRTKGGRPSV 416
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 46.8 bits (106), Expect = 0.001
Identities = 35/109 (32%), Positives = 55/109 (50%)
Frame = +3
Query: 261 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 440
+V +I+HD R A +A+V D K+ E A + L T + + E G+ P
Sbjct: 110 LVVEILHDGCRTAKVALVAVGDELKYILATENMKAGDVLKTSRVIPRIPVRPNE-GDAYP 168
Query: 441 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 587
+GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 169 LGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 46.4 bits (105), Expect = 0.002
Identities = 28/63 (44%), Positives = 37/63 (58%)
Frame = -1
Query: 786 MLMVTTTMRMLNGVHSNTTYIWPAVAFHFVFVISTPSLQDGLVNTTTTRDNTNHASVA*W 607
MLMVTTT+ +LN V + + + ST SLQD LV+TTT +NTN+ SV W
Sbjct: 1 MLMVTTTVEILNRVAMHH------IPLASSYASSTTSLQDWLVDTTTASNNTNYGSVGRW 54
Query: 606 *HF 598
+F
Sbjct: 55 QNF 57
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 46.0 bits (104), Expect = 0.003
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAM-NPVEHPHGG 771
KK + S R M+G +A G + K K +KRN W VRGVAM NPVEHPHGG
Sbjct: 389 KKTVLSGCRVMIGQIASSG-----LTK------KLMIKRNMWAKVRGVAMMNPVEHPHGG 437
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 46.0 bits (104), Expect = 0.003
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +1
Query: 643 GGGRIDKPILKAGRAYHKYKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIGKASTVK 810
G G + K R + K R+ W P VRGVAMNPV+HPHGGG + KAS
Sbjct: 192 GFGTLGKTSNLMQRNVNLGKAGRSRWLGIRPTVRGVAMNPVDHPHGGGEGKKSKKASPTN 251
Query: 811 RGTS 822
+ S
Sbjct: 252 KWAS 255
Score = 39.1 bits (87), Expect = 0.30
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Frame = +3
Query: 156 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP- 329
R G + V H K +G KL R +D+ I VV+ + +DP R + +V++++
Sbjct: 41 RDNQGHITVYH--KERGHKKLYRLVDFYYLKD-IPYVVESLEYDPNRSGFINLVYYKNGI 97
Query: 330 YKFKTRKELFIAPEGLYTGQFVYCGKKAT--LEVGNVMPVGAMPEGTIVCNLEEKMGDRG 503
Y F +A + G C K L+ GN +P G+IV N+ ++
Sbjct: 98 YSF------ILATHNTFIGNVYMCNMKFFDFLKTGNRSLFFNLPIGSIVHNVATTFNEKA 151
Query: 504 RLARASGNFATVIGHNPDAKRTRVKLPS 587
+ R++G F ++ + VKLPS
Sbjct: 152 KYLRSAGTFGLLL--KKENNMALVKLPS 177
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 46.0 bits (104), Expect = 0.003
Identities = 21/67 (31%), Positives = 39/67 (58%)
Frame = +3
Query: 414 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 593
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 594 KKSVTIK 614
+ V+++
Sbjct: 294 HRYVSLE 300
Score = 37.5 bits (83), Expect = 0.91
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 628 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
+G+V+ ++ + KAGR+ ++ R P VRGVAMN +HPHGGG
Sbjct: 305 IGVVSNIDHQNRSLGKAGRS--RWLGIR---PTVRGVAMNKCDHPHGGG 348
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 46.0 bits (104), Expect = 0.003
Identities = 34/129 (26%), Positives = 61/129 (47%)
Frame = +3
Query: 219 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 398
R +DY I G V + +DP R + +A++ + + +APEGL G ++
Sbjct: 44 RLIDYKRYIWNIFGFVHRVEYDPKRNSLIALIVYSNGVM-----SYILAPEGLLVGDCIF 98
Query: 399 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 578
+ L+ GN + +P G + ++E + RA+G++AT+I + K +K
Sbjct: 99 AKENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYATII--SKFEKIVILK 156
Query: 579 LPSGAKKSV 605
L SG + V
Sbjct: 157 LKSGELRRV 165
Score = 42.7 bits (96), Expect = 0.024
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 721 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 807
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 199 PVVRGVAMNPVDHPHGGGQGKTSGGRPSV 227
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 45.6 bits (103), Expect = 0.003
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +3
Query: 423 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKS 602
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 603 VTIK 614
+ K
Sbjct: 73 INAK 76
Score = 41.5 bits (93), Expect = 0.056
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +1
Query: 619 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
R +G V+ K + KAG++ ++ R P VRGVAMNP +HPHGGG
Sbjct: 78 RATIGTVSNPSHGTKKLYKAGQS--RWLGIR---PKVRGVAMNPCDHPHGGG 124
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.005
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +1
Query: 697 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 792
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWKGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
Score = 41.9 bits (94), Expect = 0.042
Identities = 33/131 (25%), Positives = 62/131 (47%)
Frame = +3
Query: 219 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 398
R +D+ I G+V+ I +DP R A +A++ + D K K + E + + +
Sbjct: 37 RIIDFKRNKYNILGIVESIHYDPNRNAKIALIKYLDGDK----KYIIKTNELEVSDKIIS 92
Query: 399 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 578
L+ GN + + GT++ E +G +R++G+ + +I N + +K
Sbjct: 93 SLNNVILKPGNSTIIKNINVGTLINCFESIPKTKGIFSRSAGSESEIIFKNNNF--GIIK 150
Query: 579 LPSGAKKSVTI 611
L SG KK ++I
Sbjct: 151 LSSGIKKKISI 161
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 45.2 bits (102), Expect = 0.005
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
+K+ + + G G ++ + + AGR+ ++ KR P VRGVAMNP++HPHGGG
Sbjct: 159 QKLFLKTQSAVKGANLGNTKLFEKLKMAGRS--RWLSKR---PSVRGVAMNPIDHPHGGG 213
Query: 775 NHQHIGKASTVKR 813
+ G +V +
Sbjct: 214 EGKTSGGRPSVSK 226
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 44.8 bits (101), Expect = 0.006
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +1
Query: 619 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 792
R +G V G +++ + KAGR +++ KR P VRG+ MNPV+HP+GGG + G
Sbjct: 192 RATIGEVGNGEHMNRKLGKAGR--NRWLGKR---PRVRGMVMNPVDHPNGGGQGKSKG 244
Score = 42.7 bits (96), Expect = 0.024
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 6/159 (3%)
Frame = +3
Query: 156 RKGAGSVFVSHTKKRKGA--PKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 326
+ G +V+ T +R+G KL R +D+ + V + +DP R A LA++ + +
Sbjct: 39 KTGGRNVYGRITSRRRGGGHKKLYRIIDFRRDLIDVPAEVIALEYDPNRTAHLALLKYEN 98
Query: 327 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLE---VGNVMPVGAMPEGTIVCNLEEKMGD 497
K IAP GL G + KATL GN P+ +P T + +E G
Sbjct: 99 G-----DKRYIIAPLGLKVGAKIVTSNKATLNDYVTGNNYPLSIIPPSTKLHCVELVPGK 153
Query: 498 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVTIK 614
+L R +G ++ + ++K+PSG + V K
Sbjct: 154 GAQLGRTAGTSIELVA--VENGYAQLKMPSGEIRLVNPK 190
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 44.0 bits (99), Expect = 0.010
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 721 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 807
P VRGVAMNP++HPHGGG + G S+V
Sbjct: 201 PTVRGVAMNPIDHPHGGGEGKTSGGRSSV 229
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 43.2 bits (97), Expect = 0.018
Identities = 33/109 (30%), Positives = 54/109 (49%)
Frame = +3
Query: 261 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 440
+V +++ D R A +A+V D K+ E A + L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 441 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 587
+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.024
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRK 203
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 41.5 bits (93), Expect = 0.056
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +1
Query: 715 CW----PYVRGVAMNPVEHPHGGG 774
CW P VRGV MNPV+HPHGGG
Sbjct: 80 CWLGKRPVVRGVVMNPVDHPHGGG 103
Score = 39.1 bits (87), Expect = 0.30
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 450 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
MP GT + N+E +G G+LARA+G A +I + K +KLPSG + ++
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLIS 53
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 41.5 bits (93), Expect = 0.056
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +1
Query: 715 CW----PYVRGVAMNPVEHPHGGG 774
CW P VRGV MNPV+HPHGGG
Sbjct: 84 CWLGKRPVVRGVVMNPVDHPHGGG 107
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 41.5 bits (93), Expect = 0.056
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 655 IDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 771
I+K I K+ +A K + P VRG+AMNPV+HPHGG
Sbjct: 181 IEKKIKKSKKASESRK--KGIRPIVRGLAMNPVDHPHGG 217
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 41.5 bits (93), Expect = 0.056
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +1
Query: 598 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
+++PS+ +G V+ + + KAGR+ ++ +R P VRGVAMN +HPHGGG
Sbjct: 364 RLIPSNCCAAIGTVSNKDHQHRRLGKAGRS--RWLGRR---PKVRGVAMNACDHPHGGG 417
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 41.1 bits (92), Expect = 0.074
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +1
Query: 601 VLPSSNR-GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 771
+LPS N +GIV+ + I KAG+ ++ KR P VRG+AMNPV+HPHGG
Sbjct: 184 LLPSKNGFAAIGIVSNLKQNMIVIGKAGK--NRLLGKR---PSVRGIAMNPVDHPHGG 236
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 41.1 bits (92), Expect = 0.074
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = -2
Query: 503 SSITHLFFQITHNCTFRHSTHRHYIANF*SCFLATVNKLTSIKTFWSNEQFFARLELVRI 324
+++TH+ + HN T + R YIAN LAT+++L + +EQ F L +
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLMLVPEGV 66
Query: 323 TEMDNS 306
E ++S
Sbjct: 67 AEGNSS 72
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 40.7 bits (91), Expect = 0.098
Identities = 35/110 (31%), Positives = 54/110 (49%)
Frame = +3
Query: 270 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 449
+II+D R LAV +F K F+ + L G + G KA L++GN +P+
Sbjct: 67 NIIYDSFRRIFLAV-YFIINSIIKNIYRYFLLTKNLKIGSQINFGFKAPLKIGNALPLYK 125
Query: 450 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 599
+ G+ + N+E + +G L + + N +I D T VKLPSG K
Sbjct: 126 ILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKLPSGEIK 173
Score = 38.3 bits (85), Expect = 0.52
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +1
Query: 637 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 801
+ G I + + K + + + K + P +RG AMN V+HPHGGG GKAS
Sbjct: 182 ILGQLEIRRKVNKNIKKHAGFNRKLSIRPKIRGAAMNAVDHPHGGGE----GKAS 232
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 40.3 bits (90), Expect = 0.13
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +3
Query: 264 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKA-TLEVG 428
V ++ +DP R A +A+V + RK IA E + G + G+ A + G
Sbjct: 111 VVEVRYDPCRSADIALVAGGN------RKRWIIATENMQAGDVIKTSAVIGRMAVSANEG 164
Query: 429 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 542
+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 165 DAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 40.3 bits (90), Expect = 0.13
Identities = 18/65 (27%), Positives = 38/65 (58%)
Frame = +3
Query: 417 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 596
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 597 KSVTI 611
+ +++
Sbjct: 280 RYISL 284
Score = 37.5 bits (83), Expect = 0.91
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +1
Query: 673 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KAGR +Y KR P VRG+AMN +HPHGGG
Sbjct: 305 KAGR--RRYLGKR---PVVRGMAMNAKDHPHGGG 333
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 40.3 bits (90), Expect = 0.13
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 186 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 365
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 366 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 530
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 531 ATVI 542
++
Sbjct: 214 GVLL 217
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 39.5 bits (88), Expect = 0.23
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +3
Query: 264 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKA-TLEVGNVMP 440
V ++ +DP R A +A+V + ++ E A + + T + G+ A + + G+ P
Sbjct: 77 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAEDIIKTSAVI--GRMAVSAKEGDAYP 134
Query: 441 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 542
+GA+P GT+V NLE + G RA+G ++
Sbjct: 135 LGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 39.5 bits (88), Expect = 0.23
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 721 PYVRGVAMNPVEHPHGG 771
P VRGVAMNPV+HPHGG
Sbjct: 220 PIVRGVAMNPVDHPHGG 236
Score = 38.3 bits (85), Expect = 0.52
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +3
Query: 255 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY-CGKKATLEVGN 431
K V+ + +D R A L ++F D K K +++ + Y G + K+ G
Sbjct: 75 KSVIIGVSYDSNRTA-LTSINF-DILKKKFFNDIYT--KDTYIGNIINRIDSKSEFRNGF 130
Query: 432 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 590
+ + +P GTI+ N+ + + +++GNFA +I D + ++KLPSG
Sbjct: 131 RLLLKQIPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSG 181
>UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 -
Babesia bovis
Length = 242
Score = 39.5 bits (88), Expect = 0.23
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +1
Query: 697 YKVKRNCWPYVRGVAMNPVEHPHGGG 774
YK+K P VRG AMN +HPHGGG
Sbjct: 188 YKIKLGRRPKVRGTAMNACDHPHGGG 213
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 39.5 bits (88), Expect = 0.23
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +3
Query: 426 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSV 605
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G K V
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTG--KHV 211
Query: 606 TIKQQ 620
++ Q
Sbjct: 212 VVRLQ 216
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 38.7 bits (86), Expect = 0.39
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +1
Query: 721 PYVRGVAMNPVEHPHGGGNHQH-IGKAS 801
P VRGVAMN +HPHGGG ++ IG++S
Sbjct: 213 PKVRGVAMNACDHPHGGGEGKNSIGRSS 240
Score = 35.1 bits (77), Expect = 4.9
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +3
Query: 384 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 563
G +Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKK 166
Query: 564 RTRVKLPSG 590
+KLPSG
Sbjct: 167 YVTIKLPSG 175
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 38.7 bits (86), Expect = 0.39
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 682 RAYHKYKVKRNC-W-PYVRGVAMNPVEHPHGGGN 777
R K +RN W P VRG+AMN HPHGGGN
Sbjct: 250 RILKKAGTRRNMGWRPVVRGIAMNANSHPHGGGN 283
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 37.9 bits (84), Expect = 0.69
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 727 VRGVAMNPVEHPHGGG 774
VRGV MNPV+HPHGGG
Sbjct: 11 VRGVVMNPVDHPHGGG 26
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.69
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 426 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 542
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.69
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 405 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 548
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
Score = 37.5 bits (83), Expect = 0.91
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +1
Query: 700 KVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 792
K RN W P+VRG AMN V+H HGGG + G
Sbjct: 405 KAGRNRWLGRRPHVRGAAMNSVDHAHGGGRGKSKG 439
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 37.1 bits (82), Expect = 1.2
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 727 VRGVAMNPVEHPHGG 771
VRGVAMNPV+HPHGG
Sbjct: 228 VRGVAMNPVDHPHGG 242
>UniRef50_O39307 Cluster: 71; n=7; Equid herpesvirus 4|Rep: 71 -
Equid herpesvirus 4 (Equine herpesvirus 4)
Length = 750
Score = 36.7 bits (81), Expect = 1.6
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = -1
Query: 927 FIYL-KICLCFFLXV-SLTTTDSSCSTRSNETXLATSRGSSLDSRSFTNMLMVTTTMRML 754
FIY+ +I LC + + ++ T + +T S+ T +T SS + S + TTT
Sbjct: 3 FIYVSRILLCLAVGIYAIGATTAETTTASSSTSGSTQSASSETNSSSSPTTGPTTTSSQT 62
Query: 753 NGVHSNTTYIWPAVAFHFVFVISTPSLQDGLVNTTTTRDNTNHASVA 613
+ +S T P+ + TP+ V+TTTT ++TN +S A
Sbjct: 63 SSSNSTQT---PSTS-------QTPTTSSSTVSTTTTSNSTNESSTA 99
>UniRef50_A4CJK3 Cluster: Regulatory protein, LuxR:Response
regulator receiver; n=1; Robiginitalea biformata
HTCC2501|Rep: Regulatory protein, LuxR:Response
regulator receiver - Robiginitalea biformata HTCC2501
Length = 536
Score = 36.7 bits (81), Expect = 1.6
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +1
Query: 604 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 783
L +N G+ + G GR+D P+LKA AY V+ + G + +EH + NH
Sbjct: 351 LQEANEGLKELRDGIGRVDAPLLKAQAAYASGLVR-----FAEGNLQDALEHLNEALNHI 405
Query: 784 HIG 792
H+G
Sbjct: 406 HVG 408
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 36.3 bits (80), Expect = 2.1
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 721 PYVRGVAMNPVEHPHGG 771
P VRGVAMNPV+HP+GG
Sbjct: 229 PRVRGVAMNPVDHPNGG 245
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 35.9 bits (79), Expect = 2.8
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 426 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 584
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2;
n=1; Nyctotherus ovalis|Rep: Hydrogenosomal 60S
ribosomal protein L2 - Nyctotherus ovalis
Length = 290
Score = 35.9 bits (79), Expect = 2.8
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 697 YKVKRNCWPYVRGVAMNPVEHPHGG 771
Y V R P VRG+ NPV+HP+GG
Sbjct: 249 YWVNRGIKPQVRGIVKNPVDHPNGG 273
>UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1;
Theileria parva|Rep: Ribosomal protein L2, putative -
Theileria parva
Length = 246
Score = 34.3 bits (75), Expect = 8.5
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 721 PYVRGVAMNPVEHPHGGGNHQ-HIGKAS 801
P VRG AMN +HPHGGG + IG+ S
Sbjct: 196 PKVRGSAMNACDHPHGGGEGKAPIGRRS 223
>UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2
protein - Plasmodium falciparum
Length = 245
Score = 34.3 bits (75), Expect = 8.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 697 YKVKRNCWPYVRGVAMNPVEHPHGGG 774
Y + N P VRG A N +HPHGGG
Sbjct: 194 YNIYYNIKPKVRGKAKNVCDHPHGGG 219
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,160,327,957
Number of Sequences: 1657284
Number of extensions: 23674273
Number of successful extensions: 60151
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 54865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59543
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 160908510525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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