Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_H10_e464_16.seq
(1512 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 271 4e-72
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 271 4e-72
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 271 4e-72
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 271 5e-72
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 271 5e-72
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 271 5e-72
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 271 5e-72
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 271 5e-72
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 224 6e-58
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 196 2e-49
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 40 0.018
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 40 0.018
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 40 0.018
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 37 0.17
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 33 2.1
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 33 2.7
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 271 bits (665), Expect = 4e-72
Identities = 124/159 (77%), Positives = 141/159 (88%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KK ++
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Score = 152 bits (369), Expect = 3e-36
Identities = 69/102 (67%), Positives = 76/102 (74%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGG
Sbjct: 155 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 214
Query: 775 NHQHIGKASTVKRGTSAGRKXXXXXXXXXXXXXXXKTDXKKE 900
NHQHIGK ST++R AGRK KT +KE
Sbjct: 215 NHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKE 256
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 271 bits (665), Expect = 4e-72
Identities = 124/159 (77%), Positives = 141/159 (88%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KK ++
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Score = 152 bits (369), Expect = 3e-36
Identities = 69/102 (67%), Positives = 76/102 (74%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGG
Sbjct: 155 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 214
Query: 775 NHQHIGKASTVKRGTSAGRKXXXXXXXXXXXXXXXKTDXKKE 900
NHQHIGK ST++R AGRK KT +KE
Sbjct: 215 NHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKE 256
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 271 bits (665), Expect = 4e-72
Identities = 124/159 (77%), Positives = 141/159 (88%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KK ++
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Score = 152 bits (369), Expect = 3e-36
Identities = 69/102 (67%), Positives = 76/102 (74%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGG
Sbjct: 155 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 214
Query: 775 NHQHIGKASTVKRGTSAGRKXXXXXXXXXXXXXXXKTDXKKE 900
NHQHIGK ST++R AGRK KT +KE
Sbjct: 215 NHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKE 256
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 271 bits (664), Expect = 5e-72
Identities = 123/159 (77%), Positives = 141/159 (88%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KK ++
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Score = 152 bits (369), Expect = 3e-36
Identities = 69/102 (67%), Positives = 76/102 (74%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGG
Sbjct: 155 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 214
Query: 775 NHQHIGKASTVKRGTSAGRKXXXXXXXXXXXXXXXKTDXKKE 900
NHQHIGK ST++R AGRK KT +KE
Sbjct: 215 NHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKE 256
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 271 bits (664), Expect = 5e-72
Identities = 123/159 (77%), Positives = 141/159 (88%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KK ++
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Score = 152 bits (369), Expect = 3e-36
Identities = 69/102 (67%), Positives = 76/102 (74%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGG
Sbjct: 155 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 214
Query: 775 NHQHIGKASTVKRGTSAGRKXXXXXXXXXXXXXXXKTDXKKE 900
NHQHIGK ST++R AGRK KT +KE
Sbjct: 215 NHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKE 256
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 271 bits (664), Expect = 5e-72
Identities = 123/159 (77%), Positives = 141/159 (88%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KK ++
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Score = 152 bits (369), Expect = 3e-36
Identities = 69/102 (67%), Positives = 76/102 (74%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGG
Sbjct: 155 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 214
Query: 775 NHQHIGKASTVKRGTSAGRKXXXXXXXXXXXXXXXKTDXKKE 900
NHQHIGK ST++R AGRK KT +KE
Sbjct: 215 NHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKE 256
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 271 bits (664), Expect = 5e-72
Identities = 123/159 (77%), Positives = 141/159 (88%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KK ++
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Score = 152 bits (369), Expect = 3e-36
Identities = 69/102 (67%), Positives = 76/102 (74%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGG
Sbjct: 155 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 214
Query: 775 NHQHIGKASTVKRGTSAGRKXXXXXXXXXXXXXXXKTDXKKE 900
NHQHIGK ST++R AGRK KT +KE
Sbjct: 215 NHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKE 256
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 271 bits (664), Expect = 5e-72
Identities = 123/159 (77%), Positives = 141/159 (88%)
Frame = +3
Query: 132 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 311
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 312 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 491
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 492 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KK ++
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 159
Score = 152 bits (369), Expect = 3e-36
Identities = 69/102 (67%), Positives = 76/102 (74%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGG
Sbjct: 155 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 214
Query: 775 NHQHIGKASTVKRGTSAGRKXXXXXXXXXXXXXXXKTDXKKE 900
NHQHIGK ST++R AGRK KT +KE
Sbjct: 215 NHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKE 256
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 224 bits (548), Expect = 6e-58
Identities = 102/130 (78%), Positives = 115/130 (88%)
Frame = +3
Query: 144 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 323
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 324 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 503
DPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG
Sbjct: 61 DPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRG 120
Query: 504 RLARASGNFA 533
+LARASGN+A
Sbjct: 121 KLARASGNYA 130
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 196 bits (477), Expect = 2e-49
Identities = 88/113 (77%), Positives = 100/113 (88%)
Frame = +3
Query: 270 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 449
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 450 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKSVT 608
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KK ++
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVIS 113
Score = 152 bits (369), Expect = 3e-36
Identities = 69/102 (67%), Positives = 76/102 (74%)
Frame = +1
Query: 595 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 774
KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGG
Sbjct: 109 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGG 168
Query: 775 NHQHIGKASTVKRGTSAGRKXXXXXXXXXXXXXXXKTDXKKE 900
NHQHIGK ST++R AGRK KT +KE
Sbjct: 169 NHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKE 210
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 40.3 bits (90), Expect = 0.018
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 186 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 365
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 366 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 530
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 531 ATVI 542
++
Sbjct: 214 GVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 40.3 bits (90), Expect = 0.018
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 186 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 365
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 366 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 530
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 531 ATVI 542
++
Sbjct: 214 GVLL 217
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 40.3 bits (90), Expect = 0.018
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 186 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 365
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 366 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 530
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 531 ATVI 542
++
Sbjct: 214 GVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 37.1 bits (82), Expect = 0.17
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +3
Query: 342 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 506
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 507 LARASGNFATVI 542
RA+G ++
Sbjct: 203 YIRAAGTCGVLL 214
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 33.5 bits (73), Expect = 2.1
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = -1
Query: 885 SLTTTDS-SCSTRSNETXLATSRGSSLDSRSFTNMLMVT-TTMRMLNGVHSNTT------ 730
S+TTT++ S +TRS + + T+ +S + SFT+ + T TT S+ T
Sbjct: 221 SITTTETTSHNTRSFTSSITTTETNSHSTTSFTSSITTTETTSHSTPSFSSSITTTETPL 280
Query: 729 YIWPAVAFHFVFVISTPSLQDGLVNTTTTRDNTNHAS 619
+ P + +T + GL ++ TT + T+H++
Sbjct: 281 HSTPGLTSWVTTTKTTSHITPGLTSSITTTETTSHST 317
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 33.1 bits (72), Expect = 2.7
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = -1
Query: 885 SLTTTDS-SCSTRSNETXLATSRGSSLDSRSFTNMLMVT-TTMRMLNGVHSNTT------ 730
S+TTT++ S +TRS + + T+ +S + SFT+ + T TT S+ T
Sbjct: 221 SITTTETTSHNTRSFTSSITTTETNSHSTTSFTSSITTTETTSHSTPSFSSSITTTETPL 280
Query: 729 YIWPAVAFHFVFVISTPSLQDGLVNTTTTRDNTNHAS 619
+ P + +T + GL ++ TT + T+H++
Sbjct: 281 HSTPGLPSWVTTTKTTSHITPGLTSSITTTETTSHST 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,055,364
Number of Sequences: 237096
Number of extensions: 4016673
Number of successful extensions: 7387
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7378
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22471744940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -