Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_H09_e456_15.seq
(1527 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 148 1e-35
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 3e-13
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 66 9e-11
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 63 7e-10
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 2e-09
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 60 6e-09
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 59 1e-08
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-06
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 50 4e-06
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 50 7e-06
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 50 7e-06
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 9e-06
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 48 2e-05
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 44 3e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.016
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 34 0.26
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 33 0.80
SB_56293| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59) 32 1.4
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 31 1.8
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 31 2.4
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 31 3.2
SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3) 30 4.3
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 148 bits (359), Expect = 1e-35
Identities = 81/181 (44%), Positives = 105/181 (58%), Gaps = 12/181 (6%)
Frame = +2
Query: 8 DDHKSIAGQYGVSGFPTIKIFTGSKHTP--YQGQRTAEAFVDAALKAAKEKAYDNLXXXX 181
D H+S+ G Y + GFPTIKIF +K++P Y GQRTA+ VDAA++AA+E +
Sbjct: 2 DVHQSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIVDAAMRAAQEAVSQRMSGGG 61
Query: 182 XXXXXXXXX----------VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAK 331
V+ LTD+NF++ VL+S+DLWLVEF+APWCGHC+ L P WAK
Sbjct: 62 RSSSGGGGRRGGSGGNKEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAK 121
Query: 332 AATELKGKVKVGCRRCDCASSHGLPLPSAGXXPXMKMFPSWX*XQATVSEDYXGGRTXQX 511
AATELKGKVKVG + G P +K+F + +V EDY GGRT
Sbjct: 122 AATELKGKVKVGALDATVHTVTASRYQVQG-YPTIKVFAAGIKNSHSV-EDYQGGRTASD 179
Query: 512 I 514
I
Sbjct: 180 I 180
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 73.7 bits (173), Expect = 3e-13
Identities = 43/109 (39%), Positives = 56/109 (51%)
Frame = +2
Query: 23 IAGQYGVSGFPTIKIFTGSKHTPYQGQRTAEAFVDAALKAAKEKAYDNLXXXXXXXXXXX 202
IA ++ VSG+PT+KIF Y+G R V+ K +
Sbjct: 127 IAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKKQSDPN-----------WKPPP 175
Query: 203 XXVITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELK 349
+TLT NF E+V + E L LVEF+APWCGHCK L P + KAA EL+
Sbjct: 176 VAALTLTKENFTEVV-NRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQ 223
Score = 59.3 bits (137), Expect = 8e-09
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELK 349
V L NF + V++ ++ LVEFYAPWCGHCK+L P +AKAA ++K
Sbjct: 63 VSVLNSKNF-DRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMK 108
Score = 37.9 bits (84), Expect = 0.021
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGCRRCDCA 388
V + F E+V D + L+EFYAPWCG LEP + K + + + D A
Sbjct: 527 VTVVVGKTFDEIVNDPKKDVLIEFYAPWCGIA--LEPTFKKLGKHFRNDKNIVIAKID-A 583
Query: 389 SSHGLP 406
+++ +P
Sbjct: 584 TANDVP 589
Score = 35.9 bits (79), Expect = 0.086
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 23 IAGQYGVSGFPTIKIFTGSKHTPYQGQR 106
+A +Y V G+PT+K+F K T Y+GQR
Sbjct: 242 LAQKYEVQGYPTLKVFRKGKATEYKGQR 269
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 65.7 bits (153), Expect = 9e-11
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKG-KVKVGCRRCDC 385
V+ LT+ NF E V ++ + LVEFYAPWCGHCK L P +AKAA +LK K ++ + D
Sbjct: 26 VLVLTEKNFDEAVAANKHV-LVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDA 84
Query: 386 ASSHGLPLPSAGXXPXMKMFPSWX*XQATVSEDYXGGRTXQXI 514
+ L G ++ +P+ + +Y GGRT I
Sbjct: 85 TAETKL-----GEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEI 122
Score = 62.1 bits (144), Expect = 1e-09
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 7/172 (4%)
Frame = +2
Query: 8 DDHKSIAGQYGV--SGFPTIKIFT-----GSKHTPYQGQRTAEAFVDAALKAAKEKAYDN 166
+D++ I +G+ S PTI++ +K+ P + T+E + +K +
Sbjct: 312 EDNQRIVEFFGIQSSELPTIRLINLADDDMTKYKPTAAEITSENVKEFVQAFLDKKLKPH 371
Query: 167 LXXXXXXXXXXXXXVITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATEL 346
L V L NF E+ + + VEFYAPWCGHCK L P W + +
Sbjct: 372 LLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKY 431
Query: 347 KGKVKVGCRRCDCASSHGLPLPSAGXXPXMKMFPSWX*XQATVSEDYXGGRT 502
K + + D ++++ + P +K FP + + DY GGRT
Sbjct: 432 KDHADIVVAKMD-STANEVEGVKVHSFPTIKYFP-----KEGEAVDYNGGRT 477
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 32 QYGVSGFPTIKIFTGSKHTPYQGQRTAEAFVDAALKAAKEKAYD 163
++ V G+PTIK F K + Y G RTA V K A D
Sbjct: 93 KFQVQGYPTIKFFKDGKPSEYAGGRTAPEIVSWLNKKTGPPAKD 136
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 62.9 bits (146), Expect = 7e-10
Identities = 40/105 (38%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATEL-KGKVKVGCRRCDC 385
V+ L DSNFK V +D+ LVEF+APWCGHCK L P + AA L K V + DC
Sbjct: 540 VLDLGDSNFKSGVA-GKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDC 598
Query: 386 ASSHGLPLPSAGXX--PXMKMFPSWX*XQATVSEDYXGGRTXQXI 514
+ G P +K+F +S+DY G R I
Sbjct: 599 TEAGKDTCSKYGVSGYPTLKIF-----RNGEMSKDYDGPRDSSGI 638
Score = 56.8 bits (131), Expect = 4e-08
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGCRRCDCA 388
V + NFKE+V D L+EFYAPWCGHCK+LEP + + +L+ + + D
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKLQDVKDIVIAKMDAT 923
Query: 389 SSHGLP 406
++ P
Sbjct: 924 ANDAPP 929
Score = 34.7 bits (76), Expect = 0.20
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 17 KSIAGQYGVSGFPTIKIF-TGSKHTPYQGQRTAEAFVDAALKAA 145
K +YGVSG+PT+KIF G Y G R + + K A
Sbjct: 603 KDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQA 646
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 61.3 bits (142), Expect = 2e-09
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGCRRCDCA 388
V + NF VL SED W+V+FYAPWCG C P + + A LKGKV+ + +C
Sbjct: 435 VSEVNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAA--KVNCE 492
Query: 389 SSHGL 403
+GL
Sbjct: 493 QDYGL 497
Score = 40.7 bits (91), Expect = 0.003
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGCRRCDC 385
V L +F V + V+F+APWC C L P + KAA GK VG DC
Sbjct: 286 VHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVGK-PVGFGTVDC 343
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 59.7 bits (138), Expect = 6e-09
Identities = 37/98 (37%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGCRRCDCA 388
VI LT NF E+V + E LVEFYAPWCGHCK L P + + V + D
Sbjct: 24 VIDLTKDNFDEVV-NGEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDAD 82
Query: 389 SSHGLPLP-SAGXXPXMKMFPSWX*XQATVSEDYXGGR 499
L P +K FP +T E+Y GGR
Sbjct: 83 GDRDLGSRFDVKGFPTIKYFPK----GSTTPEEYNGGR 116
Score = 33.1 bits (72), Expect = 0.60
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 5 ADDHKSIAGQYGVSGFPTIKIFTGSKHTP--YQGQRTAEAFV 124
AD + + ++ V GFPTIK F TP Y G R F+
Sbjct: 81 ADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFI 122
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 58.8 bits (136), Expect = 1e-08
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELK 349
V+ L DSNFK V +D+ LVEF+APWCGHCK L P + AA LK
Sbjct: 15 VLDLGDSNFKSGVA-GKDIMLVEFFAPWCGHCKRLAPEYETAAEALK 60
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATEL 346
+ LTD +F + D E + LV+FYAPWC C NL P + KAA +L
Sbjct: 24 IFELTDQDFDNFLKDKE-VMLVDFYAPWCSDCDNLRPKYEKAARDL 68
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 50.4 bits (115), Expect = 4e-06
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Frame = +2
Query: 41 VSGFPTIKIFTGSKHTPYQGQRTAE---AFVDAALKAAKEKAYDNLXXXXXXXXXXXXXV 211
+ +PT+K++ Y G+R AE FVD + + K+ D+ V
Sbjct: 38 IRAYPTMKLYYDGDIKRYTGRRNAEDMKVFVDKIVLKPEGKSKDS-----EGLSTSEAGV 92
Query: 212 ITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKV 364
LT + F + + L V+FYAPWC HC L P W + A + K +
Sbjct: 93 HILTKNTFDKHI--ELGLHFVKFYAPWCIHCIKLAPIWERLAEDFKDNADI 141
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 49.6 bits (113), Expect = 7e-06
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGK-VKVGCRRCDC 385
V+ LTD + E + E++ LV ++APWCGHC ++P++ KAA L + DC
Sbjct: 52 VVFLTDESHDEFIKSHENV-LVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDC 110
Query: 386 ASSHGLPLPSA-GXXPXMKMFPSWX*XQATVSED 484
+ A P +K++ + +A +E+
Sbjct: 111 TKHKDVAKKVALAGYPTVKLYKASNTAKAASAEE 144
Score = 49.6 bits (113), Expect = 7e-06
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 248 LDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGCRRCDC 385
L++ + LV FYAPWCGHCKN +P + KAA K + + DC
Sbjct: 161 LNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDC 206
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 49.6 bits (113), Expect = 7e-06
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELK 349
V+ L D F + V + + LV FYAPWCGHCK ++P + AA LK
Sbjct: 84 VVHLRDDMFDDFVAKNPSV-LVMFYAPWCGHCKAMKPEYVDAAQTLK 129
Score = 49.2 bits (112), Expect = 9e-06
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVK 361
V L+D+ FK V + + LV FYAPWCGHCK +P AA K K K
Sbjct: 197 VYHLSDTTFKSFVKKKKHV-LVMFYAPWCGHCKKAKPELMSAAKHHKDKNK 246
Score = 31.5 bits (68), Expect = 1.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 269 LVEFYAPWCGHCKNLEPHWAKAATELK 349
++ Y CG+CK +P +A AATE K
Sbjct: 3 VIVLYIAGCGYCKRFKPEFAAAATEHK 29
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 49.2 bits (112), Expect = 9e-06
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGCRRCDC 385
V L NF +++ + +D+ LV+FYAPWC HC+ L P AA L K + DC
Sbjct: 22 VYDLNAQNFDQMIRE-KDIMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDC 79
Score = 29.5 bits (63), Expect = 7.4
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 17 KSIAGQYGVSGFPTIKIFTGSKHT-PYQGQRTAEAFVD 127
K + + + G+P++K+F K+ Y GQRT A V+
Sbjct: 85 KVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVN 122
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELK 349
V+ L D NF E + +E + LV+FYAPWC C+ L P + AA +L+
Sbjct: 53 VLNLNDQNFNETIKKNEYV-LVDFYAPWCSDCQRLSPLFDTAALQLR 98
Score = 47.6 bits (108), Expect = 3e-05
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATEL--KGKVKVGCRRCD 382
++ L DSNF+ V LV+FYAPWC HCK + P + A EL V + D
Sbjct: 136 LLELDDSNFEPAV-QKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVD 194
Query: 383 CASSH 397
C++++
Sbjct: 195 CSANN 199
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 44.0 bits (99), Expect = 3e-04
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Frame = +2
Query: 101 QRTAEAFVDAALKAAKEKAYDNLXXXXXXXXXXXXXVITLTD---SNFKELVLDSEDLWL 271
Q T ++ VD +K+ K L ++ +T+ +F ++V++++ L
Sbjct: 480 QITNDSLVDFVMKSMTSKLERRLRIPPPSGISCSREIVCVTEVTTDSFDDIVINNDQDVL 539
Query: 272 VEFYAPWCGHCKNLEPHWAKAATELKGKVKVGCRRCDCASSHGLPLP-SAGXXPXMKMFP 448
+ FY PWCG C N P A + +V R D A + LP + P + +FP
Sbjct: 540 LVFYTPWCGMCINFAPVLLAVARFFQDISQVSVTRID-ADQNDLPWNLTVSSYPSIILFP 598
Query: 449 S 451
+
Sbjct: 599 A 599
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 38.3 bits (85), Expect = 0.016
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 227 SNFKELVLDSED-LWLVEFYAPWCGHCKNLEPHWAKAATE 343
+ F ++ +++D L +++FYA WCG C+ ++P + K A E
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALE 58
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 34.3 bits (75), Expect = 0.26
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 233 FKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGCRRCD 382
F + + D+E + ++F A WCG C+ + P + + A E KG V C + D
Sbjct: 4 FDKFLKDNE-VAAIDFTATWCGPCRMIGPKFEEMAKEFKG---VKCAKVD 49
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 32.7 bits (71), Expect = 0.80
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 248 LDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKV---KVGCRRCDCASSHGL 403
L + L V FYAPWCG + + AA+ L GKV + C C + L
Sbjct: 449 LHNSPLNFVFFYAPWCGQSRRAVEEFNIAASLLYGKVTFIAINCWAGSCREKYTL 503
>SB_56293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +2
Query: 14 HKSIAGQYGVSGFPTIKIFTGSKHTPYQGQRTAEAFVDAALKAAKEKA 157
H+SI+G++G S T + +G + PY ++ +++ + L A ++
Sbjct: 181 HRSISGEHGTSRLATARACSGELYNPYTDVHSSTSYLSSQLTAPSARS 228
>SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59)
Length = 218
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 220 QCDHIRLIRGGASRFFAQIVICFLFSCFECCINKCFSC 107
+C R++R A R V CF+ C CC+ +C +C
Sbjct: 82 RCVACRVMRCVACRVMC-CVACFVMHCVACCVMRCVAC 118
Score = 30.3 bits (65), Expect = 4.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 220 QCDHIRLIRGGASRFFAQIVICFLFSCFECCINKCFSC 107
+C R++R R V CF+ C CC+ +C +C
Sbjct: 10 RCVACRVMRCVGCRVMC-CVACFVMHCVACCVMRCVAC 46
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 209 VITLTDSNFKELVLD--SEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKV--KVGCRR 376
VI + D +F + ++ L +++F A WCG CK++ P + + + V KV +
Sbjct: 10 VIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMDVVFLKVDVDQ 69
Query: 377 CD-CASSHGL 403
C A S G+
Sbjct: 70 CQLTAESCGI 79
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 224 DSNFK-ELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKV 358
DS F EL L + +F A WCG CK++ P ++ + + K V
Sbjct: 15 DSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKYKQAV 60
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 209 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATE 343
++ T+ N E V D + FYAPW HC+ + + + A E
Sbjct: 28 IVEFTNENVDEYV-DGSKFVFIFFYAPWDDHCQRILQIFDQVADE 71
>SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3)
Length = 138
Score = 30.3 bits (65), Expect = 4.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 220 QCDHIRLIRGGASRFFAQIVICFLFSCFECCINKCFSC 107
+C R++R R V CF+ C CC+ +C +C
Sbjct: 2 RCVACRVMRCVGCRVMC-CVACFVMHCVACCVMRCVAC 38
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,403,473
Number of Sequences: 59808
Number of extensions: 293390
Number of successful extensions: 770
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4965079671
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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