Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_H07_e440_15.seq
(1517 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 35 0.13
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr... 35 0.17
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc... 35 0.17
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 32 1.2
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 32 1.2
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 32 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 1.2
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr... 31 2.1
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc... 31 2.1
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas... 31 2.1
AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical ... 30 3.7
U49947-6|AAA93424.1| 85|Caenorhabditis elegans Hypothetical pr... 30 4.9
U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein... 29 8.6
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 35.1 bits (77), Expect = 0.13
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Frame = +1
Query: 361 VNDKGEKEYKGLYSLKNGVATKILETGTDASATNDDTTEVYFSAKDGIYVFDAKTNKTEK 540
+ D G++E+ +GV + + D+ F KDG ++ K N TE
Sbjct: 489 MEDTGQEEWMNFVLEASGVTETVEKMRIAEEKEQDEERRKDFVDKDGRPMYFTKENVTEI 548
Query: 541 YG----TNTDSLIGIVKTNGSDVLYVLTENHDVYKVSD 642
YG T D + GI KT D L L N Y + D
Sbjct: 549 YGEYEATKIDLINGIYKTMSKDQLDAL--NSTGYSIMD 584
>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical
protein W09C2.3a protein.
Length = 1252
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/104 (22%), Positives = 47/104 (45%)
Frame = +1
Query: 520 KTNKTEKYGTNTDSLIGIVKTNGSDVLYVLTENHDVYKVSDGGNKNEKLEDVKDAQEIVL 699
KT +++G + L G+++ G++ + L+ H+ +G K K + +
Sbjct: 33 KTKDAKEFGCSLGDLRGLMEARGAEAIVRLSTEHEGV---EGLCKKLKTDSLVGLNGEQA 89
Query: 700 DYSNNLYFYGKDKAPYVVTEDGVKKILGLPENPTYVRLIKPPFI 831
D + YG + P ++ V+ +L ++PT V L+ FI
Sbjct: 90 DLDRRRHVYGANTIPPAKSKGFVRLVLDACKDPTLVILVLSGFI 133
>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
ATPase (136.6kD) (mca-1) protein.
Length = 1252
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/104 (22%), Positives = 47/104 (45%)
Frame = +1
Query: 520 KTNKTEKYGTNTDSLIGIVKTNGSDVLYVLTENHDVYKVSDGGNKNEKLEDVKDAQEIVL 699
KT +++G + L G+++ G++ + L+ H+ +G K K + +
Sbjct: 33 KTKDAKEFGCSLGDLRGLMEARGAEAIVRLSTEHEGV---EGLCKKLKTDSLVGLNGEQA 89
Query: 700 DYSNNLYFYGKDKAPYVVTEDGVKKILGLPENPTYVRLIKPPFI 831
D + YG + P ++ V+ +L ++PT V L+ FI
Sbjct: 90 DLDRRRHVYGANTIPPAKSKGFVRLVLDACKDPTLVILVLSGFI 133
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 1438 PPRGXPPPPXXXPXGRXXXXXXXXKVPXPXSXKPPPGF 1325
PP G PPPP P VP P S PP F
Sbjct: 95 PPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF 132
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 1438 PPRGXPPPPXXXPXGRXXXXXXXXKVPXPXSXKPPPGF 1325
PP G PPPP P VP P S PP F
Sbjct: 118 PPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF 155
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 1438 PPRGXPPPPXXXPXGRXXXXXXXXKVPXPXSXKPPPGF 1325
PP G PPPP P VP P S PP F
Sbjct: 368 PPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF 405
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -2
Query: 1447 KXXPPRGXPPPPXXXPXGRXXXXXXXXKVPXPXSXKPPPGFXRSAP 1310
+ PP G PPPP P G P P + PPP S P
Sbjct: 229 RQAPPAGSPPPPPP-PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 273
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -2
Query: 1447 KXXPPRGXPPPPXXXPXGRXXXXXXXXKVPXPXSXKPPPGFXRSAP 1310
+ PP G PPPP P G P P + PPP S P
Sbjct: 250 RQAPPAGSPPPPPP-PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 294
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -2
Query: 1447 KXXPPRGXPPPPXXXPXGRXXXXXXXXKVPXPXSXKPPPGFXRSAP 1310
+ PP G PPPP P G P P + PPP S P
Sbjct: 235 RQAPPAGSPPPPPP-PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 279
>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical
protein W09C2.3c protein.
Length = 1249
Score = 31.1 bits (67), Expect = 2.1
Identities = 21/99 (21%), Positives = 45/99 (45%)
Frame = +1
Query: 535 EKYGTNTDSLIGIVKTNGSDVLYVLTENHDVYKVSDGGNKNEKLEDVKDAQEIVLDYSNN 714
+++G + L G+++ G++ + L+ H+ +G K K + + D
Sbjct: 35 KEFGCSLGDLRGLMEARGAEAIVRLSTEHEGV---EGLCKKLKTDSLVGLNGEQADLDRR 91
Query: 715 LYFYGKDKAPYVVTEDGVKKILGLPENPTYVRLIKPPFI 831
+ YG + P ++ V+ +L ++PT V L+ FI
Sbjct: 92 RHVYGANTIPPAKSKGFVRLVLDACKDPTLVILVLSGFI 130
>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical
protein W09C2.3b protein.
Length = 1228
Score = 31.1 bits (67), Expect = 2.1
Identities = 21/99 (21%), Positives = 45/99 (45%)
Frame = +1
Query: 535 EKYGTNTDSLIGIVKTNGSDVLYVLTENHDVYKVSDGGNKNEKLEDVKDAQEIVLDYSNN 714
+++G + L G+++ G++ + L+ H+ +G K K + + D
Sbjct: 14 KEFGCSLGDLRGLMEARGAEAIVRLSTEHEGV---EGLCKKLKTDSLVGLNGEQADLDRR 70
Query: 715 LYFYGKDKAPYVVTEDGVKKILGLPENPTYVRLIKPPFI 831
+ YG + P ++ V+ +L ++PT V L+ FI
Sbjct: 71 RHVYGANTIPPAKSKGFVRLVLDACKDPTLVILVLSGFI 109
>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
ATPase (136.9kD) (mca-1) protein.
Length = 1249
Score = 31.1 bits (67), Expect = 2.1
Identities = 21/99 (21%), Positives = 45/99 (45%)
Frame = +1
Query: 535 EKYGTNTDSLIGIVKTNGSDVLYVLTENHDVYKVSDGGNKNEKLEDVKDAQEIVLDYSNN 714
+++G + L G+++ G++ + L+ H+ +G K K + + D
Sbjct: 35 KEFGCSLGDLRGLMEARGAEAIVRLSTEHEGV---EGLCKKLKTDSLVGLNGEQADLDRR 91
Query: 715 LYFYGKDKAPYVVTEDGVKKILGLPENPTYVRLIKPPFI 831
+ YG + P ++ V+ +L ++PT V L+ FI
Sbjct: 92 RHVYGANTIPPAKSKGFVRLVLDACKDPTLVILVLSGFI 130
>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
protein.
Length = 1228
Score = 31.1 bits (67), Expect = 2.1
Identities = 21/99 (21%), Positives = 45/99 (45%)
Frame = +1
Query: 535 EKYGTNTDSLIGIVKTNGSDVLYVLTENHDVYKVSDGGNKNEKLEDVKDAQEIVLDYSNN 714
+++G + L G+++ G++ + L+ H+ +G K K + + D
Sbjct: 14 KEFGCSLGDLRGLMEARGAEAIVRLSTEHEGV---EGLCKKLKTDSLVGLNGEQADLDRR 70
Query: 715 LYFYGKDKAPYVVTEDGVKKILGLPENPTYVRLIKPPFI 831
+ YG + P ++ V+ +L ++PT V L+ FI
Sbjct: 71 RHVYGANTIPPAKSKGFVRLVLDACKDPTLVILVLSGFI 109
>AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical
protein ZK380.2 protein.
Length = 495
Score = 30.3 bits (65), Expect = 3.7
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Frame = +1
Query: 451 SATNDDTTEVYFSAKDG----IYVFDAKTNKTEKYGTNTDSL-------IGIVKT--NGS 591
S +DD +E YFS D + D + EK +SL IG+++T + +
Sbjct: 158 STISDDDSEDYFSVTDEYVSLLQEIDKEIEILEKNSAFEESLLQEKDERIGLLETQLHAA 217
Query: 592 DVLYVLTENHDVYKVSDGGNKNEKLEDVK 678
+ + V NH++YK + + + LE+++
Sbjct: 218 EAINVAKANHELYKCQEKDRRIDNLENIE 246
>U49947-6|AAA93424.1| 85|Caenorhabditis elegans Hypothetical
protein C30G4.5 protein.
Length = 85
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 248 SYLDEYWTNSFMNSSDDTMSFSSLFSVTGAAFIN 147
S LDE W +S + SDD++ S S TG F N
Sbjct: 40 SILDEKWRSSCSDDSDDSLPVGSYIS-TGQCFFN 72
>U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein
721 protein.
Length = 597
Score = 29.1 bits (62), Expect = 8.6
Identities = 26/89 (29%), Positives = 39/89 (43%)
Frame = +1
Query: 427 ILETGTDASATNDDTTEVYFSAKDGIYVFDAKTNKTEKYGTNTDSLIGIVKTNGSDVLYV 606
I + G D + T + + +D V + K + + NT SL I S + YV
Sbjct: 399 IQQKGEDVQTIDPATYDK--NIRDTYVVKELKATRNIRPSFNT-SLGYIGGLIYSGIFYV 455
Query: 607 LTENHDVYKVSDGGNKNEKLEDVKDAQEI 693
+ + + G NEKL VKDA+EI
Sbjct: 456 FGRGIEPWTLGHGKKDNEKLIPVKDAKEI 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,898,631
Number of Sequences: 27780
Number of extensions: 550222
Number of successful extensions: 1572
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4359137160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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