Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_H06_e432_16.seq
(1457 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1788 + 29523216-29524867,29525048-29525075 34 0.24
03_05_0067 - 20460206-20460703,20461255-20461530 33 0.43
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 1.3
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 31 2.3
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818... 31 2.3
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 31 3.0
02_05_0686 - 30900748-30902167,30903442-30904742 31 3.0
07_01_0862 - 7172083-7172931 30 4.0
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 30 4.0
09_04_0258 - 16175258-16176069,16176111-16176414 30 5.3
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 30 5.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 5.3
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 30 5.3
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 7.0
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 29 7.0
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 29 7.0
02_04_0029 + 19036176-19036481,19036602-19036733,19036814-190369... 29 7.0
01_01_0796 + 6190931-6192745 29 7.0
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 29 9.2
06_03_1191 + 28286685-28287008,28287149-28287211,28287377-282874... 29 9.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 9.2
03_05_0663 + 26546810-26547304 29 9.2
03_02_0786 - 11169820-11170158,11170245-11170433,11171173-111714... 29 9.2
01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982 29 9.2
>07_03_1788 + 29523216-29524867,29525048-29525075
Length = 559
Score = 34.3 bits (75), Expect = 0.24
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -1
Query: 890 APPKNXXXXGEKXPPPPPEXXXPXGXXPXPXPGKXRGXKXXPGXGGTXF 744
APPK K PPPPP P P P P G G G F
Sbjct: 17 APPKRGRGRPRKNPPPPP----PPATDPNPHPPSGAGAGAGAGAGACPF 61
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 33.5 bits (73), Expect = 0.43
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 1080 PPPXWGFXXPPPXPP-XFXGAXLXFFXGGXPPPPXFXGP 1193
PPP + PPP PP F GA G PPPP P
Sbjct: 16 PPPQYFQAGPPPPPPQYFQGAHPPAAMWGQPPPPQAAPP 54
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.9 bits (69), Expect = 1.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = -1
Query: 890 APPKNXXXXGEKXP---PPPPEXXXPXGXXPXPXP 795
APP G+K P PPPP+ P G P P P
Sbjct: 749 APPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPP 783
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 31.1 bits (67), Expect = 2.3
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 474 NSHR*QQKDVVLGK---KPHPLGTGGXIPKERGXEXPPKSLKGPGVP 605
N H Q +DV G+ P P G G +P++ PP S PG P
Sbjct: 226 NMHNFQNRDVPPGQGFNSPPPPGQGPVLPRDAPPMPPPPSPPNPGAP 272
>03_05_0524 - 25181432-25181483,25181565-25181691,25181776-25181826,
25182159-25182314,25182405-25182905,25182999-25183713,
25183797-25183867,25183974-25184103,25185706-25186167
Length = 754
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 1080 PPPXWGFXXPPPXPPXFXGAXLXFFXGGXPPPPXFXGP 1193
PPP G PPP PP + PPPP P
Sbjct: 350 PPPLHGSVMPPPLPPATVEPVISAPMVEPPPPPAMITP 387
>11_06_0561 - 24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 30.7 bits (66), Expect = 3.0
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 1171 GGXPPXKKXRXAPXKXGGXGGGXKXPHXGGG 1079
GG P + P GG GGG P GGG
Sbjct: 53 GGSPAPRAASPPPTAAGGQGGGGGGPVSGGG 83
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 857 KXPPPPPEXXXPXGXXPXPXPGKXRGXKXXPGXGG 753
K PPPPP P P P GK G P GG
Sbjct: 351 KGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
>07_01_0862 - 7172083-7172931
Length = 282
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 1107 PPPXPPXFXGAXLXFFXGGXPPPPXFXGPXWGLFSXGG 1220
PPP P PPPP P W L + GG
Sbjct: 215 PPPSPTAAAKEEPIELEHAAPPPPFVPRPVWPLLASGG 252
>01_06_0565 + 30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -2
Query: 1222 APPXEKSPX*GPXKXGGGGXPPXKKXRXAPXKXGGXGGGXKXP 1094
APP +P P GGG PP +P GG GG P
Sbjct: 88 APPCAPTP---PQGGGGGYNPPSPSIGTSPTTPGGGGGYTPTP 127
>09_04_0258 - 16175258-16176069,16176111-16176414
Length = 371
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -2
Query: 1216 PXEKSPX*GPXKXGGGGXPPXKKXRXAPXKXGGXGGGXKXPHXGGGXKI 1070
P S P + GGG PP R GG P GGG I
Sbjct: 205 PEATSSSARPARAGGGASPPPLPVRVGASTPPPPHGGAGLPEVGGGAAI 253
>09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 29.9 bits (64), Expect = 5.3
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = -2
Query: 1177 GGGGXPPXKKXRXAPXKXGGXGGGXKXPHXGGGXKIRXPXKNPLXFFPRXXKKNXGGG 1004
GG G PP + R GG GGG GGG P + P ++ GGG
Sbjct: 41 GGSGSPPHRFSR------GGGGGGGDGGGGGGGGGRFHPYRGPSDHSGGGGYRSGGGG 92
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +3
Query: 1080 PPPXWGFXXPPPXPPXFXGAXLXFFXGGXPPPPXFXG 1190
PPP G PP PP G F GG PPP G
Sbjct: 1150 PPPPVGGLGGPPAPPPPAG-----FRGGTPPPNAHGG 1181
>01_07_0239 + 42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 1170 GXXPXKKX*XGPPEXGGGGXGXXKXPTXGGGXKF 1069
G P + GPP GGG G P GGG +
Sbjct: 453 GSGPYPQQGRGPPPYPGGGMGGAGGPRGGGGSGY 486
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.5 bits (63), Expect = 7.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 886 PXKTXXXXGKXXPPPPRXGXXPXVFXPXPPQGKXGG 779
P T PPPPR P P PP GK GG
Sbjct: 603 PSATANTASALPPPPPRPPGAP---PPPPPPGKPGG 635
>04_04_0198 + 23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 29.5 bits (63), Expect = 7.0
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 1080 PPPXWGFXXPPPXPPXFXGAXLXFFXGGXPPPPXFXGPXWGLF 1208
PPP P PP GA GG P PP P +F
Sbjct: 655 PPPAPPIAGAAPPPPMANGAAAAAPPGGNPAPPAGPQPGVNMF 697
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 29.5 bits (63), Expect = 7.0
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 1074 FXPPPXWGFXXPPPXPPXFXGAXLXFFXGGXPPPPXFXG 1190
F PPP + P P PP F G L G P G
Sbjct: 287 FSPPPAL-YASPTPSPPTFAGGYLQSRLSGETAPMIIPG 324
>02_04_0029 +
19036176-19036481,19036602-19036733,19036814-19036933,
19037763-19037837,19038282-19038392,19038528-19038635,
19038865-19038933,19038934-19039004,19039095-19039147,
19039223-19039326,19039424-19039696
Length = 473
Score = 29.5 bits (63), Expect = 7.0
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -1
Query: 884 PKNXXXXGEKXPPPPPEXXXPXGXXPXPXPGKXRGXKXXPGXGG 753
P + PPPP P P P P G PG GG
Sbjct: 32 PTSAAAAAADVPPPPSSSSSP----PPPPPSSVEGRTKQPGGGG 71
>01_01_0796 + 6190931-6192745
Length = 604
Score = 29.5 bits (63), Expect = 7.0
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 1080 PPPXWGFXXPPPXPPXFXGAXLXFFXGGXPPPPXFXGPXWGL 1205
PPP PPP PP G+ + PPPP P GL
Sbjct: 229 PPPFVADQPPPPPPPAAGGS---LWIPELPPPPVEGSPWAGL 267
>07_03_0965 - 22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 1192 GPXKXGGGGXPPXKKXRXAPXKXGGXGGGXKXP 1094
G GGGG PP + R GG G G P
Sbjct: 12 GVSGGGGGGGPPPPRRRLRSSGGGGGGSGSGGP 44
>06_03_1191 + 28286685-28287008,28287149-28287211,28287377-28287461,
28287561-28287623,28287954-28288029,28288190-28288223,
28289553-28289659,28289738-28289807,28289852-28289950
Length = 306
Score = 29.1 bits (62), Expect = 9.2
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Frame = +3
Query: 1080 PPPXWGFXXPPPXPPXFXGAXL------XFFXGGXPPPPXFXG 1190
PPP + PPP PP G L + PPPP + G
Sbjct: 10 PPPHSSYAAPPPPPPPPPGTSLYASYRHHAYPPHPPPPPAYVG 52
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 9.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -1
Query: 890 APPKNXXXXGEKXPPPPPEXXXPXGXXPXPXPG 792
AP + G PPPPP P P PG
Sbjct: 337 APSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPG 369
>03_05_0663 + 26546810-26547304
Length = 164
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -2
Query: 1201 PX*GPXKXGGGGXPPXKKXRXAPXKXGGXGGGXKXPHXGGG 1079
P P GGGG P P GG GG P GGG
Sbjct: 52 PGTNPGGGGGGGIPTIPGFGSIPGMGGGM-GGFNVPGMGGG 91
>03_02_0786 - 11169820-11170158,11170245-11170433,11171173-11171469,
11171568-11171630,11171884-11171997,11173011-11173091,
11173176-11173307,11174265-11174363,11174453-11174530,
11174641-11174901
Length = 550
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 1080 PPPXWGFXXPPPXPPXFXGAXLXFFXGGXPPPP 1178
PPP G PPP PP + + G PPPP
Sbjct: 30 PPPPMGPPPPPPMPP----VPVMYLRGVPPPPP 58
>01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982
Length = 301
Score = 29.1 bits (62), Expect = 9.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 1189 PXKXGGGGXPPXKKXRXAPXKXGGXGGGXKXPHXGGG 1079
P GG G P P GG GGG P GGG
Sbjct: 110 PSHGGGYGASPP----VTPSPGGGYGGGSPAPSHGGG 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,620,695
Number of Sequences: 37544
Number of extensions: 807918
Number of successful extensions: 4686
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4322
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4640843200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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