Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_H04_e416_16.seq
         (1545 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70036-5|CAO78725.1|  712|Caenorhabditis elegans Hypothetical pr...    31   1.7  
Z70036-4|CAO78724.1|  733|Caenorhabditis elegans Hypothetical pr...    31   1.7  
Z70036-3|CAA93876.1|  757|Caenorhabditis elegans Hypothetical pr...    31   1.7  
AL032648-5|CAA21698.1|  343|Caenorhabditis elegans Hypothetical ...    31   2.2  
U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical pr...    31   2.9  
U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical pr...    31   2.9  
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr...    29   6.7  
Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical pr...    29   6.7  
U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical pr...    29   6.7  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    29   8.8  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    29   8.8  
L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family ...    29   8.8  

>Z70036-5|CAO78725.1|  712|Caenorhabditis elegans Hypothetical
           protein T01B4.2c protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 449 WTLFIAFYSYVVCTELINTGRY*NHNFLTVFYF 351
           W LFI F+  VVC+ +++   +   +FLT FYF
Sbjct: 317 WALFIVFFFMVVCSLIVSF--WEKWDFLTAFYF 347


>Z70036-4|CAO78724.1|  733|Caenorhabditis elegans Hypothetical
           protein T01B4.2b protein.
          Length = 733

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 449 WTLFIAFYSYVVCTELINTGRY*NHNFLTVFYF 351
           W LFI F+  VVC+ +++   +   +FLT FYF
Sbjct: 338 WALFIVFFFMVVCSLIVSF--WEKWDFLTAFYF 368


>Z70036-3|CAA93876.1|  757|Caenorhabditis elegans Hypothetical
           protein T01B4.2a protein.
          Length = 757

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 449 WTLFIAFYSYVVCTELINTGRY*NHNFLTVFYF 351
           W LFI F+  VVC+ +++   +   +FLT FYF
Sbjct: 362 WALFIVFFFMVVCSLIVSF--WEKWDFLTAFYF 392


>AL032648-5|CAA21698.1|  343|Caenorhabditis elegans Hypothetical
           protein Y54G9A.6 protein.
          Length = 343

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 408 GTDDIAIESDKEGPKRLVQLDSFYIDKYEVS-NKDFSNFVIATNYKTETEV 557
           G D I    D    KR++QL  F      +S N+D S   IAT+Y+ E E+
Sbjct: 270 GADGIVNIWDPFNRKRIIQLHKFETSISSLSFNEDGSQLAIATSYQYEKEI 320


>U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical protein
            R144.4a protein.
          Length = 360

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
 Frame = +1

Query: 1336 APXXPXXLAXFXRXXPVX---PXPXPSXXFXPXXXXXXXPGPPXXXPPRXXPXPG 1491
            AP  P  +A      P     P P PS  F P       P PP   P    P PG
Sbjct: 267  APPPPPRIASKTSVAPTSSRAPLP-PSSSFAPSISASPAPAPPPPPPQAASPYPG 320


>U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical protein
            R144.4b protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
 Frame = +1

Query: 1336 APXXPXXLAXFXRXXPVX---PXPXPSXXFXPXXXXXXXPGPPXXXPPRXXPXPG 1491
            AP  P  +A      P     P P PS  F P       P PP   P    P PG
Sbjct: 269  APPPPPRIASKTSVAPTSSRAPLP-PSSSFAPSISASPAPAPPPPPPQAASPYPG 322


>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
           protein C08H9.2 protein.
          Length = 1220

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 345 ISKIKHSEEVMVLIPAGVYQFGTDDIAIESDKEGPKRLV 461
           ISKIK    V + IP    +  +D+I +E  KEG K+ V
Sbjct: 441 ISKIKDQHGVQITIPNE--ETNSDEIVVEGKKEGVKKAV 477


>Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical protein
            T28C6.1 protein.
          Length = 281

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -2

Query: 1502 GGGXPGXGXXRGGXXXGGPGXXXXLXXGXKXKXGXGXG 1389
            GGG  G G  RGG   GG G       G       G G
Sbjct: 57   GGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWG 94


>U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical protein
            F07C4.7 protein.
          Length = 180

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 16/53 (30%), Positives = 18/53 (33%)
 Frame = -2

Query: 1538 GXXXGXXXXXXXGGGXPGXGXXRGGXXXGGPGXXXXLXXGXKXKXGXGXGKTG 1380
            G   G       GGG  G G   GG   GG G           + G G G+ G
Sbjct: 52   GGFGGNNGWNNGGGGFNGNGGFNGGGRGGGRGGNGGFGDNGGLRGGNGGGRGG 104


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
            cytoskeleton modulator)homolog protein 1, isoform b
            protein.
          Length = 781

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
 Frame = +1

Query: 1381 PVXPXPXPSXXFXPXXXXXXXPGPPXXXPPRXXPX--PGXPPP 1503
            P  P P P   F         P PP   PP   P    G PPP
Sbjct: 609  PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPP 651


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
            cytoskeleton modulator)homolog protein 1, isoform a
            protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
 Frame = +1

Query: 1381 PVXPXPXPSXXFXPXXXXXXXPGPPXXXPPRXXPX--PGXPPP 1503
            P  P P P   F         P PP   PP   P    G PPP
Sbjct: 435  PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPP 477


>L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family
            protein 1, isoform d protein.
          Length = 759

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 17/53 (32%), Positives = 17/53 (32%)
 Frame = -2

Query: 1538 GXXXGXXXXXXXGGGXPGXGXXRGGXXXGGPGXXXXLXXGXKXKXGXGXGKTG 1380
            G   G       GGG  G G   GG   GG G       G     G G G  G
Sbjct: 55   GGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYG 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,536,300
Number of Sequences: 27780
Number of extensions: 667458
Number of successful extensions: 1746
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1645
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4452547242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)