Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_H04_e416_16.seq
(1545 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g28670.1 68415.m03485 disease resistance-responsive family pr... 34 0.29
At3g54270.1 68416.m05998 sucrose-phosphatase 3 (SPP3) nearly ide... 33 0.38
At4g01985.1 68417.m00265 expressed protein 33 0.50
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 31 1.5
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 2.0
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 31 2.7
At4g30460.1 68417.m04325 glycine-rich protein 31 2.7
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 31 2.7
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 31 2.7
At5g07540.1 68418.m00863 glycine-rich protein (GRP16) oleosin; g... 30 3.6
At5g46730.1 68418.m05757 glycine-rich protein 30 4.7
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 30 4.7
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 29 6.2
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 6.2
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 6.2
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 6.2
>At2g28670.1 68415.m03485 disease resistance-responsive family protein
/ fibroin-related contains similarity to silk fibroin
heavy chain [Bombyx mori] gi|765323|gb|AAB31861; contains
disease resistance response protien domain Pfam:FP03018
Length = 447
Score = 33.9 bits (74), Expect = 0.29
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Frame = -2
Query: 1499 GGXPGXGXXRGGXXXGGPGXXXXLXXGXKXKXGXGXGKT-GXXRXXXAXXXGXSGAXCEE 1323
GG PG G GG GP G G G G G G GA
Sbjct: 134 GGGPGAGSALGGGAGAGPALGGGAGAGPALGGGAGAGSALGGGGAGAGPALGGGGAGAGP 193
Query: 1322 SXXTXXXGXEXPLGG 1278
+ G LGG
Sbjct: 194 ALGGGVAGSGSALGG 208
>At3g54270.1 68416.m05998 sucrose-phosphatase 3 (SPP3) nearly
identical to sucrose-phosphatase (SPP3) [Arabidopsis
thaliana] GI:16904077
Length = 425
Score = 33.5 bits (73), Expect = 0.38
Identities = 13/49 (26%), Positives = 30/49 (61%)
Frame = +3
Query: 471 SFYIDKYEVSNKDFSNFVIATNYKTETEVFGDSFVFAIFLNNTFKELLK 617
++ +DK ++ K SN ++ + + E+F S V+ + ++N+ +ELL+
Sbjct: 183 TYLLDKLDIEGKQPSNTLVCGDSGNDAELFNISDVYGVMVSNSHEELLQ 231
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 33.1 bits (72), Expect = 0.50
Identities = 24/89 (26%), Positives = 26/89 (29%)
Frame = -2
Query: 1538 GXXXGXXXXXXXGGGXPGXGXXRGGXXXGGPGXXXXLXXGXKXKXGXGXGKTGXXRXXXA 1359
G G GG G G RGG GG G G G G G +
Sbjct: 141 GGGAGGAIGGGASGGVGGGGKGRGGKSGGGAGGG---VGGGVGAGGGAGGSVGAGGGIGS 197
Query: 1358 XXXGXSGAXCEESXXTXXXGXEXPLGGKG 1272
G GA S G GG+G
Sbjct: 198 GGGGTVGAGGRGSGGASGGGGTVGAGGRG 226
Score = 31.9 bits (69), Expect = 1.2
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = -2
Query: 1538 GXXXGXXXXXXXGGGXPGXGXXRGGXXXGGPGXXXXLXXGXKXKXGXGXGKTGXXRXXXA 1359
G G GGG G G GG GG G G G G G G A
Sbjct: 90 GGAIGGGASGGAGGGGKGRGRKGGGGAGGGVGGGVGAGGGAGGSVGAGGGIGGG--AGGA 147
Query: 1358 XXXGXSG 1338
G SG
Sbjct: 148 IGGGASG 154
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = -2
Query: 1544 AXGXXXGXXXXXXXGGGXPGXGXXRGGXXXGGPGXXXXLXXGXKXKXGXGXGKTGXXRXX 1365
A G G GGG G G G GG G G G G G G R
Sbjct: 53 AGGGASGGIGVGGGGGGGGGIGGSGGVGAGGGVGGGAGGAIGGGASGGAGGGGKGRGRKG 112
Query: 1364 XAXXXGXSG 1338
G G
Sbjct: 113 GGGAGGGVG 121
Score = 29.5 bits (63), Expect = 6.2
Identities = 24/94 (25%), Positives = 28/94 (29%), Gaps = 3/94 (3%)
Frame = -2
Query: 1544 AXGXXXGXXXXXXXGGGXPGXGXXRGGXXXG--GPGXXXXLXXGXKXKXG-XGXGKTGXX 1374
A G G GG G G GG G G G + G K + G G G G
Sbjct: 116 AGGGVGGGVGAGGGAGGSVGAGGGIGGGAGGAIGGGASGGVGGGGKGRGGKSGGGAGGGV 175
Query: 1373 RXXXAXXXGXSGAXCEESXXTXXXGXEXPLGGKG 1272
G G+ G GG+G
Sbjct: 176 GGGVGAGGGAGGSVGAGGGIGSGGGGTVGAGGRG 209
>At1g31810.1 68414.m03904 formin homology 2 domain-containing protein
/ FH2 domain-containing protein low similarity to
SP|P48608 Diaphanous protein {Drosophila melanogaster};
contains Pfam profile PF02181: Formin Homology 2(FH2)
Domain
Length = 1201
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Frame = +1
Query: 1381 PVXPXPXPSXXFXPXXXXXXXPGPPXXXPP----RXXPXPGXPPP 1503
P P P PS P P PP PP R P P PPP
Sbjct: 576 PPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPP 620
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 1381 PVXPXPXPSXXFXPXXXXXXXPGPPXXXPPRXXPXPGXPPP 1503
P P P P P PP PP P P PPP
Sbjct: 405 PSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPP 445
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +1
Query: 1381 PVXPXPXPSXXFXPXXXXXXXPGPPXXXPPRXXPXPGXPPP 1503
P P P P + P P PP PP P P PPP
Sbjct: 438 PPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPP 478
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 30.7 bits (66), Expect = 2.7
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 1390 PXPXPSXXFXPXXXXXXXPGPPXXXPPRXXPXPGXPP 1500
P P P+ F P P PP PP P P PP
Sbjct: 1092 PPPPPAALFPPLPPPPSQPPPPPLSPPPSPPPPPPPP 1128
>At4g30460.1 68417.m04325 glycine-rich protein
Length = 162
Score = 30.7 bits (66), Expect = 2.7
Identities = 18/69 (26%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Frame = -2
Query: 1538 GXXXGXXXXXXXGGGXPGXGXXRG-GXXXGGPGXXXXLXXGXKXKXGXGXGKTGXXRXXX 1362
G G GGG G G G G GG G G G G
Sbjct: 39 GIGAGIGIGIGIGGGGSGSGAGAGSGSGGGGSSSSSSSSSSSSSSSGGGGGDAGSEAGSY 98
Query: 1361 AXXXGXSGA 1335
A SG+
Sbjct: 99 AGSHAGSGS 107
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical to
gi|10880495|gb|AAG24277
Length = 176
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 1381 PVXPXPXPSXXFXPXXXXXXXPGPPXXXPPRXXPXPGXPPP 1503
PV P P P P PP PP P P PPP
Sbjct: 53 PVTTSPPPVTTAPPPAN----PPPPVSSPPPASPPPATPPP 89
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical to
gi|10880495|gb|AAG24277
Length = 191
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 1381 PVXPXPXPSXXFXPXXXXXXXPGPPXXXPPRXXPXPGXPPP 1503
PV P P P P PP PP P P PPP
Sbjct: 53 PVTTSPPPVTTAPPPAN----PPPPVSSPPPASPPPATPPP 89
>At5g07540.1 68418.m00863 glycine-rich protein (GRP16) oleosin;
glycine-rich protein 16 (GRP16) PMID:11431566
Length = 244
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -2
Query: 1544 AXGXXXGXXXXXXXGGGXPGX-GXXRGGXXXGGPGXXXXLXXGXKXKXGXG 1395
A G G GGG G G GG GGPG G K + G
Sbjct: 163 ASGGASGGASGGASGGGPGGASGGGPGGASGGGPGGASGGASGDKPEGAPG 213
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 1502 GGGXPGXGXXRGGXXXGGPGXXXXLXXGXKXKXGXGXGKTGXXRXXXAXXXGXSG 1338
GGG G G GG GG G G G G G G G G
Sbjct: 35 GGGGHGGGGGSGGVSSGGYGGESGGGYGGGSGEGAGGGYGGAEGYASGGGSGHGG 89
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-containing
protein low similarity to AHM1 [Triticum aestivum]
GI:6691467; contains Pfam profile PF00226: DnaJ domain
Length = 797
Score = 29.9 bits (64), Expect = 4.7
Identities = 24/94 (25%), Positives = 27/94 (28%), Gaps = 3/94 (3%)
Frame = +1
Query: 1273 PFP---PRGXSXPXXXVXXLSSHXAPXXPXXLAXFXRXXPVXPXPXPSXXFXPXXXXXXX 1443
PFP PR S P + SS P + P+ P S F
Sbjct: 476 PFPVSQPRPNSQPFS-MSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNTSK 534
Query: 1444 PGPPXXXPPRXXPXPGXPPPXXXXXXXPXXXPXA 1545
P P P P P PP P P A
Sbjct: 535 PMPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAA 568
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical to
gi_3883126_gb_AAC77826
Length = 135
Score = 29.5 bits (63), Expect = 6.2
Identities = 13/39 (33%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Frame = +1
Query: 1390 PXPXPSXXFXPXXXXXXXPGPPXXXPP-RXXPXPGXPPP 1503
P P P+ P PP PP P P PPP
Sbjct: 24 PAPTPTATPPPATPPPVATPPPVATPPPAATPAPATPPP 62
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +1
Query: 1381 PVXPXPXPSXXFXPXXXXXXXPGPPXXXPPRXXPXPGXPPPXXXXXXXPXXXP 1539
P+ P P P P PP PP P P PP P P
Sbjct: 92 PLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPP 144
>At3g19430.1 68416.m02464 late embryogenesis abundant protein-related
/ LEA protein-related similar to late embryogenesis
abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.5 bits (63), Expect = 6.2
Identities = 23/91 (25%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = +1
Query: 1273 PFPPRGXSXPXXXVXXLSSHXAPXXPXXLAXF-XRXXPVXPXPXPSXXFXPXXXXXXXPG 1449
P PP P V + +P P PV P P P P
Sbjct: 77 PVPPVSPPPPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPP 136
Query: 1450 PPXXXPPRXXPXPG-XPPPXXXXXXXPXXXP 1539
PP P P P PPP P P
Sbjct: 137 PPTPTPSVPSPTPPVSPPPPTPTPSVPSPTP 167
Score = 29.5 bits (63), Expect = 6.2
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
Frame = +1
Query: 1381 PVXPXPXPSXXFXPXXXXXXXPGP-PXXXPPRXXPXPGXPPPXXXXXXXPXXXP 1539
P P P P P P P P PP P P P P P P
Sbjct: 124 PSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSP 177
>At1g49750.1 68414.m05579 leucine-rich repeat family protein contains
leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 1390 PXPXPSXXFXPXXXXXXXPGPPXXXPPRXXPXPGXPPP 1503
P P PS P P PP PP P P PPP
Sbjct: 46 PPPSPSPEPEPEPADCPPPPPPPPCPPPPSPPPCPPPP 83
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,860,719
Number of Sequences: 28952
Number of extensions: 618609
Number of successful extensions: 2146
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1910
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4144594560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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