Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_H03_e408_15.seq
         (1508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    31   0.022
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    25   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 31.1 bits (67), Expect = 0.022
 Identities = 16/70 (22%), Positives = 30/70 (42%)
 Frame = +3

Query: 195 EQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDKKIT 374
           E+E  +     E +++    E  ++D D+      G        + + KK+K+ K+K   
Sbjct: 216 EKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTE 275

Query: 375 EEEYEVEKII 404
           +EE    K I
Sbjct: 276 DEELNKTKPI 285


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 138 KNRTDDDVISSTNGSLANDEQETNRNKDSKENDQD 242
           KN+TDDD     + +L +D  +  ++++ K +D D
Sbjct: 153 KNKTDDD-----DDALVSDSDDREKDEEDKRDDTD 182


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 771  SWEPESTLNXPELLRSLW 824
            SW P ST N PE   + W
Sbjct: 1357 SWNPGSTTNYPEWQPTEW 1374


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,411
Number of Sequences: 336
Number of extensions: 4115
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45271850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)