Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_H03_e408_15.seq
(1508 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 52 3e-07
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 48 4e-06
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 47 6e-06
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 38 0.004
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 38 0.005
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 35 0.025
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 35 0.025
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 35 0.034
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 34 0.044
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 34 0.059
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 34 0.059
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 33 0.078
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 33 0.078
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 33 0.078
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 32 0.18
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 32 0.24
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.31
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 31 0.31
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 31 0.31
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 31 0.31
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 31 0.41
SPAC664.08c |||traub transciption factor family protein |Schizos... 31 0.41
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 31 0.55
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 31 0.55
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 30 0.72
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 30 0.72
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 30 0.96
SPCC1442.17c ||SPCC285.02c|DUF292 family protein|Schizosaccharom... 30 0.96
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 30 0.96
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 29 1.3
SPBC3B9.06c |apg3||autophagy associated protein Apg3 |Schizosacc... 29 1.3
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 1.3
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 29 1.3
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 29 1.3
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 29 1.3
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.7
SPAC9G1.12 |cpd1||tRNA |Schizosaccharomyces pombe|chr 1|||Manual 29 1.7
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 29 2.2
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 29 2.2
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 29 2.2
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 28 2.9
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 28 2.9
SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomy... 28 2.9
SPAC13G7.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 2.9
SPAPB2B4.07 |||ubiquitin family protein, human UBTD1 homolog|Sch... 28 3.9
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 28 3.9
SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz... 27 5.1
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 27 5.1
SPAC3A12.13c |||translation initiation factor eIF3 complex subun... 27 5.1
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 27 5.1
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 5.1
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 27 6.7
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 27 6.7
SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 27 6.7
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 27 6.7
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 27 6.7
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 27 8.9
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 8.9
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 27 8.9
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 8.9
SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr... 27 8.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 8.9
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 27 8.9
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 27 8.9
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 8.9
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 51.6 bits (118), Expect = 3e-07
Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Frame = +3
Query: 165 SSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKK 344
S++ S+ +D+ E +KE A+ + + E+ + SK + + + NAK+
Sbjct: 13 STSKRSVIDDDSEPELPSMTKEAIASHKADSGSSDNEVESDHESKSSSKKL---KENAKE 69
Query: 345 RKSGKDKKITEEEYEVEKIIDSKKIK--GKLHYLIRWKGYSAGND-TWEPENTLS-CPDL 512
+ G++++ E+EY VEK++ + + G YL++W+GY +D TW E S C L
Sbjct: 70 EEGGEEEE--EDEYVVEKVLKHRMARKGGGYEYLLKWEGYDDPSDNTWSSEADCSGCKQL 127
Query: 513 I 515
I
Sbjct: 128 I 128
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 47.6 bits (108), Expect = 4e-06
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Frame = +3
Query: 375 EEEYEVEKIIDSKKIKG---KLHYLIRWKGYSAGNDTWEPENTLS 500
+EEYEVE+I+D K + KL Y IRW YS+ +DTWEP LS
Sbjct: 5 QEEYEVERIVDEKLDRNGAVKL-YRIRWLNYSSRSDTWEPPENLS 48
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 47.2 bits (107), Expect = 6e-06
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Frame = +3
Query: 189 NDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKK-RKSGKDK 365
+++++ S +N+ S ++ SV+ + ++ S + N + + SG +
Sbjct: 110 SEDKKEEDESSSYKNEFKSSSSASVSSNFEKTSGSDDHNSQSPVPLNEGFEYIASSGSED 169
Query: 366 KITEEEYEVEKIIDS--KKIKGKLHYLIRWKGYSAGND-TW-EPENTLSCPDLI 515
K ++EE+ VE I+DS KK Y ++W+GY +D TW + E+ C +LI
Sbjct: 170 KNSDEEFAVEMILDSRMKKDGSGFQYYLKWEGYDDPSDNTWNDEEDCAGCLELI 223
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 384 YEVEKIIDSKKIKGKLH-YLIRWKGYSAGNDTWEPENTL 497
YEVE I+ + K ++ Y I+W GY ++TWEPE L
Sbjct: 22 YEVEDILADRVNKNGINEYYIKWAGYDWYDNTWEPEQNL 60
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/87 (21%), Positives = 42/87 (48%)
Frame = +3
Query: 135 SKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRG 314
S + +D S + S ND ++ + +S+ + +DSD++ S + E+ ++S+G+
Sbjct: 108 SSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSS--SSDSESESSSEGSDSS 165
Query: 315 RSGSRNNAKKRKSGKDKKITEEEYEVE 395
S S + ++ D + + E E
Sbjct: 166 SSSSSSESESSSEDNDSSSSSSDSESE 192
Score = 36.3 bits (80), Expect = 0.011
Identities = 24/98 (24%), Positives = 45/98 (45%)
Frame = +3
Query: 135 SKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRG 314
S++ + D SS + +D + + +S+ + +DSD+ S + D+D +S++ GN
Sbjct: 263 SESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSS-SSDSDSSSSSEDGNSNT 321
Query: 315 RSGSRNNAKKRKSGKDKKITEEEYEVEKIIDSKKIKGK 428
+ + + S + EE K DS KI K
Sbjct: 322 DTTTSGEVSAQSS--TNSTSSEESTSVKDEDSSKIHDK 357
Score = 34.7 bits (76), Expect = 0.034
Identities = 15/72 (20%), Positives = 36/72 (50%)
Frame = +3
Query: 168 STNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKR 347
S + S ND ++ + +S+ + +DSD++ S + E+S+ + S S +++
Sbjct: 227 SESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSD 286
Query: 348 KSGKDKKITEEE 383
S + + + E+
Sbjct: 287 SSDSESESSSED 298
Score = 34.3 bits (75), Expect = 0.044
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 168 STNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKR 347
S + S ND ++ + +S+ + +DSD++ S + E+ ++S+G+ S S + ++
Sbjct: 173 SESSSEDNDSSSSSSDSESESSSEDSDSSSS--SSDSESESSSEGSDSSSSSSSSESESS 230
Query: 348 KSGKDKKITEEEYEVE 395
D + + E E
Sbjct: 231 SEDNDSSSSSSDSESE 246
Score = 32.3 bits (70), Expect = 0.18
Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Frame = +3
Query: 81 FIPQ--TKKLCLRKFNMRKISKNRTDDDVISSTNG---SLANDEQETNRNKDSKENDQDS 245
F+P T+ + K + K+ D IS + + + S E+D S
Sbjct: 57 FLPYLTTEDVGKHKKTKESLEKSNDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSS 116
Query: 246 DANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDKKITE 377
+ES ++DND +S++S S +++ + + +E
Sbjct: 117 SESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSE 160
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 35.1 bits (77), Expect = 0.025
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Frame = +3
Query: 147 TDDDVISSTNGSLANDEQETNRNKDSKENDQDSDAN-ESVNQDNDEASNASK--GNKRGR 317
TD + + ++ S +ND + + N+ DS++ ES + D+D+ N+ N R
Sbjct: 172 TDKENLLESDASSSNDSESELTDSADNMNESDSESEIESSDSDHDDGENSDSKLDNLRNY 231
Query: 318 SGSRNNAKKR-KSGKDKKITEEEYEVEKIIDSKKIKGKLHYLIRWKGYSAGNDTWEPENT 494
S N +K+ ++ + ++ ++ + + I KK+K H + Y N E T
Sbjct: 232 IVSLNQKRKKDEADAESVLSSDDNDSIEEISIKKVKYDPHETNKESEY---NLIGSSEKT 288
Query: 495 LSCPDLI 515
+ DL+
Sbjct: 289 IDITDLL 295
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 35.1 bits (77), Expect = 0.025
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +3
Query: 174 NGSLANDEQETNRNKDSKENDQDSDANESVNQDN--DEASNASKGNKR----GRSGSRNN 335
NG++ + + +N N + ++ S+AN + DN DE + NKR G S SR N
Sbjct: 1476 NGNVNRNPRVSNNNSTNVSRERSSEANHRTSNDNKRDEVTEGKDKNKRQDISGESNSRQN 1535
Query: 336 AKKRKSGK 359
++G+
Sbjct: 1536 NAISRAGR 1543
Score = 30.3 bits (65), Expect = 0.72
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 165 SSTNGSLANDEQETNR-NKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAK 341
+STN S + +R + D+K ++ +++ QD SN+ + N R+G N +
Sbjct: 1489 NSTNVSRERSSEANHRTSNDNKRDEVTEGKDKNKRQDISGESNSRQNNAISRAGRSNGSN 1548
Query: 342 KRKSGKD 362
+ +D
Sbjct: 1549 RGNDSRD 1555
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 34.7 bits (76), Expect = 0.034
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +3
Query: 141 NRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRS 320
N+ +D + + ND++E N + EN++++DANE +D ++ +
Sbjct: 75 NKGEDGNENEVDNVNNNDKKEDEDNVE--ENEEEADANEEEEEDEEDDEEDEEDEDESGG 132
Query: 321 GSRNNAKKRKSGK----DKKITEEEYEVE 395
G R A+ + + + ++ E+E E+E
Sbjct: 133 GRRKRARHDRRNQFLDIEAEVDEDEEELE 161
Score = 27.1 bits (57), Expect = 6.7
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = +3
Query: 75 TRFIPQTKKLCLRKFNMRKISKNRTDDDVISSTNGS----LANDEQETNRNKDSKENDQD 242
TR P L KI+ N + S N S N ++ N N+ N+ D
Sbjct: 33 TRASPNGSDLLNDDSEAAKITTNEKQSSPVDSHNESPNDTTINKGEDGNENEVDNVNNND 92
Query: 243 SDANESVNQDNDEASNASK 299
+E ++N+E ++A++
Sbjct: 93 KKEDEDNVEENEEEADANE 111
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +3
Query: 120 NMRKISKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSD 248
N+ K +D+V + + AN+E+E + +D +E+++D D
Sbjct: 87 NVNNNDKKEDEDNVEENEEEADANEEEEED-EEDDEEDEEDED 128
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 34.3 bits (75), Expect = 0.044
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 159 VISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNA 338
+I S GS +N+ +N N ++ N+ ++ NES+ S + + G SG+ NN
Sbjct: 508 LIGSFMGSSSNNSNSSNNNSNTSNNNSNTSNNESMVSKLSSLSGMA-SSFLGSSGNNNNN 566
Query: 339 KKRKSG 356
SG
Sbjct: 567 NNSNSG 572
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 33.9 bits (74), Expect = 0.059
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 15/161 (9%)
Frame = +3
Query: 63 RXFGTRFIPQTKKLCLRKFNMRKISKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQD 242
R GTR + K+ R F+ +I ++ I S +Q+ + D E+ D
Sbjct: 97 RVDGTRRSSRAKRPVYRDFSYTEIDEHEIP---IPKKRKSKPAPKQKKSVASDD-EDAYD 152
Query: 243 SDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDKKI-----TEEEYE--VEKI 401
S+N + S + +G+S + N + +D++ EEEYE ++ +
Sbjct: 153 KRHRFSINSASGTEIRTSLRSSKGKSVNYNEQEFYDDFEDEEEEVEEQVEEEYEPIIDFV 212
Query: 402 IDSKKI--------KGKLHYLIRWKGYSAGNDTWEPENTLS 500
++ +K K YLI+W+ S ++TWE +TLS
Sbjct: 213 LNHRKRADAQDDDPKSSYQYLIKWQEVSHLHNTWEDYSTLS 253
Score = 32.3 bits (70), Expect = 0.18
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 363 KKITEEEYE-VEKIIDSK-KIKGKLHYLIRWKGYSAGNDTWEPENTL 497
K + EEY+ VE+I+ S+ +GK Y ++W+ N TWE + +
Sbjct: 296 KNMLFEEYKIVERIVASETNEEGKTEYFVKWRQLPYDNCTWEDADVI 342
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 33.9 bits (74), Expect = 0.059
Identities = 25/96 (26%), Positives = 53/96 (55%)
Frame = +3
Query: 126 RKISKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGN 305
RK + ++DD+ SL++DE++ + K K+ D+ ++S + +D S S+ +
Sbjct: 918 RKSQQKASEDDM------SLSDDEEKQSGKK--KKKDRKKRKSKSKQESSD--SGVSEDD 967
Query: 306 KRGRSGSRNNAKKRKSGKDKKITEEEYEVEKIIDSK 413
+ S +RN KKR+ ++++ EEY ++ D++
Sbjct: 968 EIPLSDARNKTKKRR--VNRRVISEEYTFDQDSDAE 1001
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 33.5 bits (73), Expect = 0.078
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +3
Query: 186 ANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDK 365
A+ E + NK K +Q D N S+N N ++ A + NKR K+R K +
Sbjct: 248 ASPELRSEENKAHKHMEQYFDINSSLNSHNGQSLLAERRNKRYTRKEMEQMKRRTKEKKE 307
Query: 366 KITEEEYEV 392
Y++
Sbjct: 308 MKRRALYDI 316
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 33.5 bits (73), Expect = 0.078
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 183 LANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGR-SGSRNNAKKRKSGK 359
L D Q+ + N +K + NE+ D+D S +S N+ R S S+++AK+ K
Sbjct: 418 LNTDFQKLDLNDTTKNQNDQILPNETSESDDDANSISSMENEEERTSDSKSSAKQGKGNG 477
Query: 360 DKKITEEEYEVEK 398
K T EE K
Sbjct: 478 RAKETPEEKRARK 490
Score = 33.1 bits (72), Expect = 0.10
Identities = 15/74 (20%), Positives = 32/74 (43%)
Frame = +3
Query: 201 ETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDKKITEE 380
ET+ + D + + E D+ ++ KGN R + ++K K+ K +
Sbjct: 442 ETSESDDDANSISSMENEEERTSDSKSSAKQGKGNGRAKETPEEKRARKKKTKEDKAEKR 501
Query: 381 EYEVEKIIDSKKIK 422
+ ++ K +K+K
Sbjct: 502 KSKIPKYEKKRKLK 515
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 33.5 bits (73), Expect = 0.078
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +3
Query: 135 SKNRTDDDVISSTNGSLANDEQETNRNKDSKEND-QDSDANESVNQDNDEASNASKGNKR 311
++ R + + +S L +D +E ++ S+EN+ +D +E + + S K
Sbjct: 177 TRQRLAEHLENSKKTILQHDNKEEDKEIHSEENETKDEIKSEKKEPEIKKQEGGSSTEKV 236
Query: 312 GRSGSRNNAKKRKSGKDKKITEEEYEVEKIIDSKKIK 422
G+ S ++ K + KD+ EEE + I +KIK
Sbjct: 237 GQPSSSDDKAKGSTSKDQPSEEEEKTSD--IQDRKIK 271
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 32.3 bits (70), Expect = 0.18
Identities = 22/92 (23%), Positives = 41/92 (44%)
Frame = +3
Query: 150 DDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSR 329
+DD SST+G + E +++ N + + QD S + ++
Sbjct: 39 EDDEFSSTSGKKVVNVFEILEKENNAINSEAEKSVSEEEQDEPLVEGESPIVSTNKK-AK 97
Query: 330 NNAKKRKSGKDKKITEEEYEVEKIIDSKKIKG 425
N KK+K K KK+T + + D++K++G
Sbjct: 98 NKKKKKKQQKKKKVTGKRDLDNQSSDNEKLEG 129
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 31.9 bits (69), Expect = 0.24
Identities = 21/100 (21%), Positives = 46/100 (46%)
Frame = +3
Query: 129 KISKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNK 308
K KN T SS + S++ ++++ + + + E++ + ES ++ NDE +A +
Sbjct: 38 KKKKNTTSSG--SSESDSMSQNDKKKDSSLNESEDEDFAGFGESASE-NDELESAESEAE 94
Query: 309 RGRSGSRNNAKKRKSGKDKKITEEEYEVEKIIDSKKIKGK 428
S + ++S +K ++E + K +K K
Sbjct: 95 NDEESSSQKSNSKESHAQRKKLQKERKAMKPFADTSLKAK 134
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 31.5 bits (68), Expect = 0.31
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +3
Query: 165 SSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAK- 341
S NG + N N DS+E +QD D E VN ++ SN+ + +
Sbjct: 3958 SDMNGVTKDSVVSENENSDSEEENQDLD--EEVNDIPEDLSNSLNEKLWDEPNEEDLLET 4015
Query: 342 KRKSGKDKKITEEEYEVEKIIDSKKIKGK 428
++KS + E V K D+K ++ K
Sbjct: 4016 EQKSNEQSAANNESDLVSKEDDNKALEDK 4044
Score = 29.9 bits (64), Expect = 0.96
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Frame = +3
Query: 147 TDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQ------------DNDEASN 290
T D V+S S D +E N++ D + ND D + S+N+ + ++ SN
Sbjct: 3964 TKDSVVSENENS---DSEEENQDLDEEVNDIPEDLSNSLNEKLWDEPNEEDLLETEQKSN 4020
Query: 291 A-SKGNKRGRSGSRNNAKKRKSGKDKKITEEEYEV 392
S N S+ + K KD++ E+E E+
Sbjct: 4021 EQSAANNESDLVSKEDDNKALEDKDRQEKEDEEEM 4055
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 252 NESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDKKITEEEYEVEKI 401
N S+ ++SN+SK + +R +KR GK + EEEY V +
Sbjct: 1119 NRSLYTQYTKSSNSSKMTRNTSKNNRRLERKRARGKKGTVFEEEYLVNSL 1168
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 31.5 bits (68), Expect = 0.31
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 673 EY-EVDRIMEVHHKKDGSREFLIHWK 747
EY +VDRI+ H DGS E+L+ WK
Sbjct: 286 EYKQVDRIVAKHLNSDGSVEYLVKWK 311
Score = 29.1 bits (62), Expect = 1.7
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Frame = +3
Query: 120 NMRKISKNRTDDDVISSTNGSLANDEQETNRNK---DSKENDQDSDANESVNQDNDEASN 290
N S++RT D+ S+ ++E E++ + K+ + +N V + +S
Sbjct: 94 NGSSFSRHRTIRDLDDEAE-SVTSEESESDDSSYGGTPKKRSRQKKSNTYVQDEIRFSSR 152
Query: 291 ASKG---NKRGRSGSRNNAKKRKSGKDKKITEEEYE----VEKIIDSKKIKGK------- 428
SKG N+ S ++ + + EE E ++ ++D + I+G
Sbjct: 153 NSKGVNYNEDAYFESFEEEEEEEMYEYATEVSEEPEDTRAIDVVLDHRLIEGHDGSTPSE 212
Query: 429 -LHYLIRWKGYSAGNDTWEPENTLS 500
+LI+W +S + TWEP N +S
Sbjct: 213 DYEFLIKWVNFSHLHCTWEPYNNIS 237
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 31.5 bits (68), Expect = 0.31
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +3
Query: 147 TDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNK---RGR 317
TDDD+ N +DE + ++ D D + E +++NDE + + R
Sbjct: 223 TDDDI---NNNEYKDDESSSGSESYERDEDVDEEEEEDDDENNDEGDDEDENENDELRSE 279
Query: 318 SGSRN 332
+GS N
Sbjct: 280 NGSPN 284
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +3
Query: 165 SSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKK 344
+ST+ S ND+ + D + D D N + +D DE+S+ S+ +R +
Sbjct: 201 TSTDSSQYNDQDD--HVYDDTNDGTDDDINNNEYKD-DESSSGSESYERDEDVDEEEEED 257
Query: 345 RKSGKDKKITEEEYEVEKI 401
D+ E+E E +++
Sbjct: 258 DDENNDEGDDEDENENDEL 276
Score = 26.6 bits (56), Expect = 8.9
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +3
Query: 141 NRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDND----EASNASKGNK 308
N DD V TN +D+ N KD D+ S +ES +D D E + + N
Sbjct: 209 NDQDDHVYDDTNDG-TDDDINNNEYKD----DESSSGSESYERDEDVDEEEEEDDDENND 263
Query: 309 RGRSGSRNNAKKRKS 353
G N + +S
Sbjct: 264 EGDDEDENENDELRS 278
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 31.1 bits (67), Expect = 0.41
Identities = 18/83 (21%), Positives = 36/83 (43%)
Frame = +3
Query: 174 NGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKS 353
NG+ A KD++E+ +D + + + + ++S + + + K +K
Sbjct: 422 NGTSAYSTATDAVTKDAEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKH 481
Query: 354 GKDKKITEEEYEVEKIIDSKKIK 422
K K+ +EE + E KK K
Sbjct: 482 KKSKRKSEESEDGESPKKKKKSK 504
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 31.1 bits (67), Expect = 0.41
Identities = 19/65 (29%), Positives = 37/65 (56%)
Frame = +3
Query: 114 KFNMRKISKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNA 293
KF RK S+ ++++S GSL + + +DS+E++ D+ + + N + EAS+
Sbjct: 68 KFKGRKTSRQ----ELLNS--GSLNSQSSSPSEEEDSEEDENDAVSEDHENFSSSEASSI 121
Query: 294 SKGNK 308
S+ N+
Sbjct: 122 SEENE 126
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 30.7 bits (66), Expect = 0.55
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = +3
Query: 213 NKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDKKI 371
N + Q +D +++QDN +S+++K +GR G++ + S + I
Sbjct: 14 NTEQVSEKQHTDTALNISQDNKTSSSSAKRGAKGRRGTKGKSGPANSSQTSNI 66
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 30.7 bits (66), Expect = 0.55
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 207 NRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKR 347
NR + KE++ ++ S++QD E + KGN RS + +NAK+R
Sbjct: 130 NRKNNEKEDEFMAEILGSIDQDIPERLSTKKGN---RSHTTSNAKRR 173
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 30.3 bits (65), Expect = 0.72
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 207 NRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKK--RKSGKDK-KITE 377
NR+ S + +DSD + S + D+DE SK K K RK K++ +I +
Sbjct: 263 NRSLSSSPSSEDSDLSLSSDSDDDEKKQPSKSEKTSSMSVSIKPPKIIRKGSKEQNRIAK 322
Query: 378 EEYEVEKIIDSK 413
E+ + SK
Sbjct: 323 EKASGAPLTKSK 334
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 30.3 bits (65), Expect = 0.72
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 168 STNGSLANDE-QETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKK 344
S+ GS DE T N +S E+D + + + N+ D SN S + +G S ++
Sbjct: 337 SSAGSEGVDEGTSTEANDESSEDDDEDNNTDEANE--DAQSNVSDESPKGEGSSHSDNVV 394
Query: 345 RKSGKD-KKITEE 380
G KK+ E+
Sbjct: 395 LSDGNSVKKMNED 407
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/69 (18%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 201 ETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRK--SGKDKKIT 374
+++ + + ++AN+ ++D+DE +N + N+ +S + + K + S D +
Sbjct: 336 DSSAGSEGVDEGTSTEANDESSEDDDEDNNTDEANEDAQSNVSDESPKGEGSSHSDNVVL 395
Query: 375 EEEYEVEKI 401
+ V+K+
Sbjct: 396 SDGNSVKKM 404
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 183 LANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNN 335
L N E + N D EN++ S + ++ ++ +E + S+ +R SGS ++
Sbjct: 94 LENFENQENE-ADEAENEETSYSEQNHTENTEEIAEESRPLERTHSGSNHH 143
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 29.9 bits (64), Expect = 0.96
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +3
Query: 174 NGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKS 353
NG+ + QE + N ++ ++ S N + ++ ++ SKG+ R S + + +KRKS
Sbjct: 419 NGTDYSTSQEPSSNANN-QSSPTSSINGKASSESANGTSYSKGSSRRNSKNETDEEKRKS 477
>SPCC1442.17c ||SPCC285.02c|DUF292 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 271
Score = 29.9 bits (64), Expect = 0.96
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 195 EQETNRNKDSKEN-DQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKS 353
E +T N +S EN +Q + E Q++DE N + N R+ +NN S
Sbjct: 182 EADTMLNLESSENREQPTSLKEENTQEDDEKVNGNLANISKRAEPQNNGSTNAS 235
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 29.9 bits (64), Expect = 0.96
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +3
Query: 135 SKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASN-------A 293
+K + + V S + + ++ NKDS++ND + + +S +D S+ A
Sbjct: 472 AKVKAESKVRSKAKSDKSRAKLSSDTNKDSEKNDNNDASLQSAGVASDGESSPETPLTKA 531
Query: 294 SKGNKRGRSGSRNNAKKRKSGKDK 365
SK K S N+ K +G+ K
Sbjct: 532 SKSKKAKASKLANDTSKNANGETK 555
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 147 TDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASN 290
T + +S S A E + N ++ +E+D D D +E ++D D +N
Sbjct: 179 TSKNGLSKKQHSEAQPEVQGNDDEVEEEDDDDDDEDEDEDEDEDNNNN 226
>SPBC3B9.06c |apg3||autophagy associated protein Apg3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 275
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 195 EQETNRNKDSKENDQDSDANESVNQDNDEASNAS--KGNKRGRSGSRNNAKKRKSGKDKK 368
E + RNKD +DQD DA S++ D + ++A KG + S S K + D+
Sbjct: 93 ETDDTRNKD---DDQDDDAISSIHSDTSDIASAERLKGQSKELSDSGPLPLKDEEDDDQM 149
Query: 369 IT 374
++
Sbjct: 150 VS 151
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 126 RKISKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASN-ASKG 302
+K SK++ DD + +G + + E++ + K SKEND + + ++A AS
Sbjct: 153 KKKSKSK-DDGSEALDDGDIESSEKDKKKKKKSKENDDAPKKDRKTRKKEEKARKLASML 211
Query: 303 NKRGRSGSRNNAKKRKS 353
+ N A K+
Sbjct: 212 ESENKDNDANAAPLNKT 228
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 29.5 bits (63), Expect = 1.3
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Frame = +3
Query: 135 SKNRTDDDVISSTNGSLANDEQE---------TNRNKDSKENDQDSDAN-ESVNQDNDEA 284
+K DD +++ G DEQE TN +D ++++ + + E + ++ +E
Sbjct: 30 TKEELGDDALAAEEGQSVLDEQEIEEALEEDDTNYEEDIIDDEESAQVDEEELEEEEEEE 89
Query: 285 SNAS-----KGNKRGRSGSRN-NAKKRKSGKDKKITEEEYEVE 395
+A+ K RS +N A KRK+ + + E+ +E
Sbjct: 90 EDATPEPVVTSKKNSRSKPKNGGASKRKASRRTVVDEDSENLE 132
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 153 DDVISSTNGS--LANDEQETNRNKDSKENDQDSDANESVNQDNDEASN 290
D ISST S L EQE+ + SK+ND D N ND+ +N
Sbjct: 169 DKEISSTEESEQLCYKEQESEKELYSKDNDDSLDILNVPNLVNDDIAN 216
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 357 KDKKITEEEYEVEKIIDSKKIKGKLHYLIRWKGYSAGNDTW 479
+D + E VE +I +K+K Y I+W G +TW
Sbjct: 811 RDITVNGERRRVEALIGRQKLKKSFQYEIKWFGKPHKYNTW 851
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 150 DDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDE-ASNASKGNKRGRSGS 326
DD I + S DE+E D END++ + + + N+E S A+ N+R + +
Sbjct: 35 DDSKIGAP--SEVQDEKELLEFLDQLENDEEKNEKNPIEEANEENESVAATSNERQQHDA 92
Query: 327 RNNAKKRKSGKDKKITE 377
N + K TE
Sbjct: 93 SNQPSQAAQTTINKNTE 109
>SPAC9G1.12 |cpd1||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 364
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 198 QETNRNKDSKENDQDSDANESVNQDNDEASNASK--GNKRGRSGSRN 332
+E N + D+K DQD+D+ N+ + A K NKR R G N
Sbjct: 279 REQNLSSDAKVEDQDNDSMLGENKSSVSTETALKPVTNKRIREGDGN 325
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 28.7 bits (61), Expect = 2.2
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = +3
Query: 129 KISKNRTDDDVISSTNGS-LANDEQETNRNKDSKENDQDSD---ANESVNQDNDEASNAS 296
KIS T D ++ N S +++ ++ KD+ ND D+D N+ V +++ +N
Sbjct: 108 KISTEETSDTNVALNNTSEISHKSSNNSQPKDASVNDTDADFEQQNQVVQSKDEKITNTD 167
Query: 297 K------GNKRGRSGSRNNAKKRKSGKDKKITE 377
N + S + AKK S + KIT+
Sbjct: 168 PIPSPIITNLKTESSKSSGAKKATS--NAKITD 198
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 28.7 bits (61), Expect = 2.2
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +3
Query: 192 DEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNK--RGRSGSRNNAKKRKSGKDK 365
DE+E + +D +DQ + +ES +++ E+ + ++ +G+ R +KS K K
Sbjct: 219 DEEEISDLEDWLGSDQSMETSESEEEESSESESDEDEDEDNKGKIRKRKTDDAKKSRK-K 277
Query: 366 KITEEEYEVEKIIDSKKIKGKLH 434
+ E E+ +++KI H
Sbjct: 278 RAPHIHIEYEQERENEKIPAVQH 300
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = +3
Query: 216 KDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDKKITEEEYEVE 395
KD+K D +D ++ N+D + + + + ++ K+ K TEE+Y
Sbjct: 60 KDNKPLDNKNDPKKTHNEDESHTNESLPSTDKKKKKDNDDFKQNLKSSSNK-TEEKYSAT 118
Query: 396 KIIDSK 413
+ SK
Sbjct: 119 QASKSK 124
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +3
Query: 207 NRNKDSKENDQDSDANESVNQDNDEAS------NASKGNKRGRSGSRNNAKKRKSGKDKK 368
N +D +E D D + N + ++ D S N S NK+ + +R +KRK ++++
Sbjct: 163 NLKEDMEEGDFDENGN-FIRKNYDPESQYDAWLNGSVSNKKSIAAAREAEQKRKEMENRR 221
Query: 369 ITEEEYEVEKI 401
+E E K+
Sbjct: 222 RNQELEEFSKL 232
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 28.3 bits (60), Expect = 2.9
Identities = 18/97 (18%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Frame = +3
Query: 129 KISKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDND----EASNAS 296
K S +++ + NG + + E ++D ++N +D+D +
Sbjct: 175 KESDFESEEKATNDNNGLIETNHNSKLEESSEHEEEEDEESNIERTEDSDHQIPQRGGTL 234
Query: 297 KGNKRG--RSGSRNNAKKRKSGKDKKITEEEYEVEKI 401
+ ++G RSG + +KR + K T E +++++
Sbjct: 235 EAPRKGGPRSGVGSRKRKRATVSRKWSTNSESKIKRV 271
>SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 478
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 135 SKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDS-DANESVNQD 272
S+N + D +S T+G L D TN + ++QD+ ESV+ D
Sbjct: 286 SENTEEIDTVSKTSGVLELDNDSTNNFQKEGLDEQDNLQKEESVHID 332
>SPAC13G7.09c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 135
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 180 SLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGK 359
++ + Q NR +++ DQ S+ QDND + +S+ R R +KK++ K
Sbjct: 51 NMVRNVQSHNRGINNRRRDQKRKQLISIKQDND-LNVSSERLSRRIDVPRPTSKKKRLYK 109
Query: 360 DKKITEEEYEVEKIIDSK 413
+ +E EK + K
Sbjct: 110 ETPDLDEPGSREKRVSQK 127
>SPAPB2B4.07 |||ubiquitin family protein, human UBTD1
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 239
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 84 IPQTKKLCLRKFNMRKISKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDAN 254
IP+ R F RK S + DD++ISS + + + +E +T + D + D++
Sbjct: 113 IPKIVARIPRAFAERKDSLDDEDDNMISSNDPTKSPEEHDTTTKSIASLKDAELDSS 169
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 225 KENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDKKITEEEYEVEKII 404
KE+ + + N + ++ DE N + + R ++ + + KK+ EE EVEKI+
Sbjct: 27 KEHLRMTQQNAEIEKE-DEEYNIEEEEEAERDIEISSESSDEEAELKKLEEEGEEVEKIL 85
Query: 405 -DSKKIK 422
D ++IK
Sbjct: 86 RDEERIK 92
>SPCC1919.03c |||AMP-activated protein kinase beta subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 240 DSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDKKITEEEY 386
D + ++ DN + ++ ++ G SGS + K+R KK T + Y
Sbjct: 47 DLNQEGEMSDDNQQEGGNNRTSQNGTSGSSGHTKRRSQTSGKK-THQPY 94
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/82 (15%), Positives = 37/82 (45%)
Frame = +3
Query: 150 DDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSR 329
+D V + S ++ ++ K++ + + +++ E K + +
Sbjct: 150 EDRVCEDASSSDEAKREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKE 209
Query: 330 NNAKKRKSGKDKKITEEEYEVE 395
+++KKRKSG K +++ +++
Sbjct: 210 SSSKKRKSGSSDKEEKKKKKIK 231
>SPAC3A12.13c |||translation initiation factor eIF3 complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 274
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 192 DEQETNRNKDSKENDQDS-DANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDKK 368
++++ NK+S +ND S S + ND+ SN K + + N +K +
Sbjct: 40 EDEDEEENKESLQNDSHSVSQKSSSSSQNDQGSN--KMTRIQQKIQERNFEKAIKASEAA 97
Query: 369 ITEEEYEVEK 398
EE E K
Sbjct: 98 AKEESLESSK 107
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 198 QETNRNKDSKENDQDSDANESVNQDNDEAS--NASKGNKRGRSGSRNNAKKRKSGKDKKI 371
+E + DS+E +DSD + N+D +E S +A K R+ K + S +
Sbjct: 232 EEDYLSTDSEEFSEDSDNSSEENKDTNEPSTKDAEKTVPEDVVNLRSEQKLQPSFGHPEF 291
Query: 372 TEEEYEVE 395
E++++E
Sbjct: 292 ENEDFDLE 299
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 135 SKNRTDDDVISSTNGSLANDEQETNRNKDS---KENDQDSDANESVNQDNDEASNASKGN 305
S N +DD SS N S AND N+N D + +D D+ S+ ++ + N + +
Sbjct: 227 SNNISDDPYTSSVN-SFANDNLAHNKNIDPQIFQHSDTDNVVENSLQTEDVYSQNQDESS 285
Query: 306 K 308
+
Sbjct: 286 E 286
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 27.1 bits (57), Expect = 6.7
Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 141 NRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRS 320
N+ D + + L+++E + N+ +E + D+ + ES + + +A + + ++
Sbjct: 138 NKIHDAWYAFNSHELSDEENSDSSNEREEEVEDDNRSVESYSSSDYQARSRRRFSEETTQ 197
Query: 321 GSRNNAKKRKSGKD-KKITEEEYE 389
+KRK K+ I E YE
Sbjct: 198 RRAEIKEKRKKRKEFASILSEYYE 221
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 27.1 bits (57), Expect = 6.7
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +3
Query: 162 ISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQD-NDEASNASKGN-------KRGR 317
+ T G ++ + E + S++N QD + S N+D N++++ + G+ KRG+
Sbjct: 714 VVETQGKVSELKME-GTSVTSEDNIQDVVSEVSYNEDTNNQSTPDTTGSDIHIVSEKRGK 772
Query: 318 SGSRNNAKKRKSGKDKK 368
GS+ K+ S K+++
Sbjct: 773 KGSKVITAKKVSAKERR 789
>SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +3
Query: 63 RXFGTRFIPQTKKLCLRKFNMRKISKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQD 242
+ FG + Q +K L +N+R + N+TD++ S+ S A+ +++ +K + + +
Sbjct: 202 QSFGKASVDQIQKQ-LECYNVRMMELNKTDENNESAICESQASSKEDERSDKTTSSSKKK 260
Query: 243 S 245
S
Sbjct: 261 S 261
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 27.1 bits (57), Expect = 6.7
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 156 DVISSTNGSLANDEQETNRNKDSKEN-DQDSDANESVNQDNDEASNASKGNKRGRSGSR 329
D+++S G+ N+E+ + DSKE ++S A ++ SN + GR R
Sbjct: 90 DLLASNEGNEKNNEENNVVSSDSKEAITKESGAELESSEPASTNSNVGMTTRSGRQSPR 148
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 27.1 bits (57), Expect = 6.7
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 180 SLANDEQETNRNK-DSKENDQDSDANESVNQDNDEASNASKGNKR-GRSGSR 329
SL DE + DS+E D+D D S D+D+ A R R+ SR
Sbjct: 134 SLLEDEHALKEARGDSRERDRDRDRTRSSRFDDDDDDRAPYEESRLSRAPSR 185
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 26.6 bits (56), Expect = 8.9
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 114 KFNMRKISKNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNA 293
K N R + D +S N SLAN+ Q+ N+ + + Q+S S+N + SN
Sbjct: 276 KPNSRDEDSELSIDVPLSMLNRSLANNSQK-NKKRTPNKPLQES----SINSVKEGESNP 330
Query: 294 SKGNKRGR 317
KRGR
Sbjct: 331 VVKRKRGR 338
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +3
Query: 216 KDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSGKDKKITEEEYEVE 395
KD++ DSD + V+ + E+ N+ + S SR + + + + + E V
Sbjct: 169 KDNELKFNDSDEEDEVDDEEIESFNSFSRKMQTISNSRYRGSPKPNIEKQSCSSESDRVS 228
Query: 396 KIIDSKK 416
+I D ++
Sbjct: 229 QISDDEE 235
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +3
Query: 192 DEQETNRNKDSKENDQD-----SDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKSG 356
+E+E++ + D ++D S ES + E ++AS+ ++ + ++ K+K
Sbjct: 129 EEEESDEDYDLSPTEEDLVETVSGDEESEEESESEDNSASEEDELDSAPAKKAQVKKKRT 188
Query: 357 KDKKITEEEYEVEKIIDSK-KIKG 425
KD+ EE +K K K++G
Sbjct: 189 KDESEQEEAASPKKNNTKKQKVEG 212
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +3
Query: 141 NRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRS 320
N D+D+ + SL +E ++++ ++ S+AN ++QD + + KR +
Sbjct: 259 NNEDEDIKRAIELSL----KEMPQSREPPSYERPSEANVVISQDQHLTEDEDEELKRAIA 314
Query: 321 GSRNNAKKRKSGKDKKIT 374
S A+K S KD +T
Sbjct: 315 ISLEEAQK-SSQKDDNVT 331
>SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +3
Query: 198 QETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGSRNNAKKRKS 353
+++ N+D ++ S+ N S N+ + N + NN KK+ S
Sbjct: 204 EKSEENEDGVTDNDSSNVNSSTNESPNPTDINVCSNDDATDNTENNLKKKAS 255
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 8.9
Identities = 19/80 (23%), Positives = 31/80 (38%)
Frame = +3
Query: 138 KNRTDDDVISSTNGSLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGR 317
KN DD + + + E ++N +++ D DS + + E S A K +
Sbjct: 481 KNDEDDSKVDESVAKDSTTPNELSKNANNENYDDDSSFYGKLAESVQEVSIADKKDAEIV 540
Query: 318 SGSRNNAKKRKSGKDKKITE 377
S S +K ITE
Sbjct: 541 KDSFKIFNPEDSDLEKNITE 560
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 214 TRTRKRMIKIPTLTKASTKTMMKLRMRPKEIREVDLVV 327
T +KR +P LTK + K + + +E++E D V+
Sbjct: 440 TNFKKRKKDLPYLTKKARKNYKETKKITQEMKEADAVI 477
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 180 SLANDEQETNRNKDSKENDQDSDANESVNQDNDEASNASKGNKRGRSGS 326
+L N + ++ + + E+D +S +NE V+ D+DE + SK G+ +
Sbjct: 340 ALENYDGFSDLDVEEDEDDVESSSNEEVS-DSDEEDSDSKHTAHGQQNA 387
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 838 HXXXIHKLLNNSGQFKVLSGS 776
H H++LNNSG +L GS
Sbjct: 2841 HILRFHRILNNSGMHALLQGS 2861
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,187,892
Number of Sequences: 5004
Number of extensions: 72177
Number of successful extensions: 459
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 844406124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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