Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_H02_e400_16.seq
         (1532 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00004DBE72 Cluster: UPI00004DBE72 related cluster; n...    35   4.9  

>UniRef50_UPI00004DBE72 Cluster: UPI00004DBE72 related cluster; n=5;
            Xenopus tropicalis|Rep: UPI00004DBE72 UniRef100 entry -
            Xenopus tropicalis
          Length = 878

 Score = 35.1 bits (77), Expect = 4.9
 Identities = 28/107 (26%), Positives = 35/107 (32%)
 Frame = +2

Query: 1172 LXPGXXKGRPTPPXAPRXXXIXPNWETXIXKNXXPGXRILTKNPRGATXXPXXGPXGTXG 1351
            L PG   GR  PP AP    + P   T   ++  PG       P GA       P    G
Sbjct: 614  LPPGAPIGRSLPPGAPNGRSLPPGAPT--GRSLPPGAPTGRSLPPGAPTGRSLPPGAPTG 671

Query: 1352 XXXPPIXAAXKPXPXXXXXKXXXPXRAXXPXGXAXXPXSXXPP*XPP 1492
               PP+    +  P         P  A  P G +  P +      PP
Sbjct: 672  RSLPPVAPTGRSLPPGAPTGRSLPPGA--PNGRSLPPGAPTGRSLPP 716


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,094,786,492
Number of Sequences: 1657284
Number of extensions: 17613451
Number of successful extensions: 35997
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 31189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35393
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 163731466850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)