Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_H02_e400_16.seq
         (1532 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    24   2.6  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   3.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   4.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   4.5  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 281 KYSVKLIQLCATGLRSMMYR 340
           KYSV +I  CA G+ +  +R
Sbjct: 172 KYSVDIISTCAFGINTYCFR 191


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 108 LSNIKNKXLGPNXLQNGGXPLVXGXAPQKP 19
           L NI+++ + P        PL+   APQKP
Sbjct: 21  LENIRDRRVLPTVEPGYLRPLIPATAPQKP 50


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 61  VLQXIRPEXFVFDI**FMASSCDEFKQLCNVCVVTITLRILDSFCTL 201
           +L+ +  + FV+ I   +A+    +  +C + VVT+    L  FC L
Sbjct: 131 LLRNVSVQFFVYVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVL 177


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 61  VLQXIRPEXFVFDI**FMASSCDEFKQLCNVCVVTITLRILDSFCTL 201
           +L+ +  + FV+ I   +A+    +  +C + VVT+    L  FC L
Sbjct: 131 LLRNVSVQFFVYVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVL 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,082
Number of Sequences: 336
Number of extensions: 4931
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46091250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)