Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_G09_e455_13.seq
         (1566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...   171   9e-45
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    32   0.010

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
            transcriptase andRNase H protein.
          Length = 712

 Score =  171 bits (417), Expect = 9e-45
 Identities = 85/281 (30%), Positives = 167/281 (59%)
 Frame = +3

Query: 78   GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
            G+IK   S +ASP+ + KKK+G  R+C+D R +N+K+I +    P  ++ + R  +    
Sbjct: 332  GVIKREASPYASPMTVGKKKDGTVRICLDARMINSKMIADCESPPAADELLRRFHEIRYM 391

Query: 258  TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
            +++DL++ ++ + ++ +S++YT+F+     Y +  +PFGL TA   F R ++ V    + 
Sbjct: 392  STIDLRSSYWQIPLSPESRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTEVR 451

Query: 438  DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
            +  V++Y+DDL+++ +   E    L  VF++ ++  +  N EK  F+QK++ +LG+I+  
Sbjct: 452  E-FVVNYIDDLLVASETLNEHLEHLRQVFEKLKQARMTINLEKSNFIQKEVKFLGHILTI 510

Query: 618  GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
              I    EK++A+ NF +P+  K +++FLGL  ++RKF   YS   + L  LL+KG  + 
Sbjct: 511  NGIKADPEKISAIRNFPVPQKTKHVRAFLGLCNFYRKFCARYSAATQDLNKLLRKGEKWR 570

Query: 798  FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDASADG 920
            +  + ++A++ +K++  ++ +L+  D N    + TD+S  G
Sbjct: 571  WGRNEQEAFDRVKDLFLEAVLLRYPDLNKIFYVQTDSSGYG 611


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 32.3 bits (70), Expect = 0.010
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +3

Query: 369 FGLCTAPSVFQRFINDVFQDLILDGTVLSYLDDLILSFKYEYEGF-LKLEMVFKRAEEYG 545
           FG     S F+ F+N    D+  +  ++S ++ LI SFK  Y+    KLE   ++++   
Sbjct: 159 FGTMQRTSFFKTFLNSCLMDVYYEFLLISLINILIRSFKSRYKDLNQKLETACEQSKSVE 218

Query: 546 LLFN 557
            L N
Sbjct: 219 ELMN 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,708
Number of Sequences: 336
Number of extensions: 5653
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47217925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)