Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_G09_e455_13.seq
(1566 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 193 6e-50
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 193 6e-50
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 193 6e-50
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 193 6e-50
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 193 6e-50
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 193 6e-50
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 193 6e-50
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 193 6e-50
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 190 5e-49
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 190 5e-49
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 190 5e-49
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 30 0.76
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 193 bits (470), Expect = 6e-50
Identities = 98/278 (35%), Positives = 159/278 (57%)
Frame = +3
Query: 78 GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
GII+ S++ A P++ KK G R+ VDY+ LN + +PLPLIE + +++ + +F
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 258 TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
T LDL++ + + V K + +F PRG +E+ MP+G+ TAP+ FQ FIN + +
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA-K 557
Query: 438 DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
+ V+ Y+DD+++ K E E ++ V ++ + L+ N KC F Q Q+ ++GY + +
Sbjct: 558 ESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617
Query: 618 GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
+P +E + V +K P+N K L+ FLG Y RKFI S + PL +LLKK V +
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677
Query: 798 FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDAS 911
+ +A E +K L PVL+ +D + + L TDAS
Sbjct: 678 WTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDAS 715
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 193 bits (470), Expect = 6e-50
Identities = 98/278 (35%), Positives = 159/278 (57%)
Frame = +3
Query: 78 GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
GII+ S++ A P++ KK G R+ VDY+ LN + +PLPLIE + +++ + +F
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 258 TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
T LDL++ + + V K + +F PRG +E+ MP+G+ TAP+ FQ FIN + +
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA-K 557
Query: 438 DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
+ V+ Y+DD+++ K E E ++ V ++ + L+ N KC F Q Q+ ++GY + +
Sbjct: 558 ESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617
Query: 618 GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
+P +E + V +K P+N K L+ FLG Y RKFI S + PL +LLKK V +
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677
Query: 798 FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDAS 911
+ +A E +K L PVL+ +D + + L TDAS
Sbjct: 678 WTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDAS 715
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 193 bits (470), Expect = 6e-50
Identities = 98/278 (35%), Positives = 159/278 (57%)
Frame = +3
Query: 78 GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
GII+ S++ A P++ KK G R+ VDY+ LN + +PLPLIE + +++ + +F
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 258 TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
T LDL++ + + V K + +F PRG +E+ MP+G+ TAP+ FQ FIN + +
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA-K 557
Query: 438 DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
+ V+ Y+DD+++ K E E ++ V ++ + L+ N KC F Q Q+ ++GY + +
Sbjct: 558 ESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617
Query: 618 GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
+P +E + V +K P+N K L+ FLG Y RKFI S + PL +LLKK V +
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677
Query: 798 FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDAS 911
+ +A E +K L PVL+ +D + + L TDAS
Sbjct: 678 WTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDAS 715
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 193 bits (470), Expect = 6e-50
Identities = 98/278 (35%), Positives = 159/278 (57%)
Frame = +3
Query: 78 GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
GII+ S++ A P++ KK G R+ VDY+ LN + +PLPLIE + +++ + +F
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 258 TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
T LDL++ + + V K + +F PRG +E+ MP+G+ TAP+ FQ FIN + +
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA-K 557
Query: 438 DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
+ V+ Y+DD+++ K E E ++ V ++ + L+ N KC F Q Q+ ++GY + +
Sbjct: 558 ESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617
Query: 618 GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
+P +E + V +K P+N K L+ FLG Y RKFI S + PL +LLKK V +
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677
Query: 798 FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDAS 911
+ +A E +K L PVL+ +D + + L TDAS
Sbjct: 678 WTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDAS 715
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 193 bits (470), Expect = 6e-50
Identities = 98/278 (35%), Positives = 159/278 (57%)
Frame = +3
Query: 78 GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
GII+ S++ A P++ KK G R+ VDY+ LN + +PLPLIE + +++ + +F
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 258 TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
T LDL++ + + V K + +F PRG +E+ MP+G+ TAP+ FQ FIN + +
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA-K 557
Query: 438 DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
+ V+ Y+DD+++ K E E ++ V ++ + L+ N KC F Q Q+ ++GY + +
Sbjct: 558 ESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617
Query: 618 GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
+P +E + V +K P+N K L+ FLG Y RKFI S + PL +LLKK V +
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677
Query: 798 FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDAS 911
+ +A E +K L PVL+ +D + + L TDAS
Sbjct: 678 WTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDAS 715
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 193 bits (470), Expect = 6e-50
Identities = 98/278 (35%), Positives = 159/278 (57%)
Frame = +3
Query: 78 GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
GII+ S++ A P++ KK G R+ VDY+ LN + +PLPLIE + +++ + +F
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 258 TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
T LDL++ + + V K + +F PRG +E+ MP+G+ TAP+ FQ FIN + +
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA-K 557
Query: 438 DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
+ V+ Y+DD+++ K E E ++ V ++ + L+ N KC F Q Q+ ++GY + +
Sbjct: 558 ESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617
Query: 618 GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
+P +E + V +K P+N K L+ FLG Y RKFI S + PL +LLKK V +
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677
Query: 798 FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDAS 911
+ +A E +K L PVL+ +D + + L TDAS
Sbjct: 678 WTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDAS 715
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 193 bits (470), Expect = 6e-50
Identities = 98/278 (35%), Positives = 159/278 (57%)
Frame = +3
Query: 78 GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
GII+ S++ A P++ KK G R+ VDY+ LN + +PLPLIE + +++ + +F
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 258 TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
T LDL++ + + V K + +F PRG +E+ MP+G+ TAP+ FQ FIN + +
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA-K 557
Query: 438 DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
+ V+ Y+DD+++ K E E ++ V ++ + L+ N KC F Q Q+ ++GY + +
Sbjct: 558 ESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617
Query: 618 GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
+P +E + V +K P+N K L+ FLG Y RKFI S + PL +LLKK V +
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677
Query: 798 FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDAS 911
+ +A E +K L PVL+ +D + + L TDAS
Sbjct: 678 WTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDAS 715
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 193 bits (470), Expect = 6e-50
Identities = 98/278 (35%), Positives = 159/278 (57%)
Frame = +3
Query: 78 GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
GII+ S++ A P++ KK G R+ VDY+ LN + +PLPLIE + +++ + +F
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 258 TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
T LDL++ + + V K + +F PRG +E+ MP+G+ TAP+ FQ FIN + +
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA-K 557
Query: 438 DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
+ V+ Y+DD+++ K E E ++ V ++ + L+ N KC F Q Q+ ++GY + +
Sbjct: 558 ESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617
Query: 618 GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
+P +E + V +K P+N K L+ FLG Y RKFI S + PL +LLKK V +
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677
Query: 798 FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDAS 911
+ +A E +K L PVL+ +D + + L TDAS
Sbjct: 678 WTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDAS 715
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 190 bits (463), Expect = 5e-49
Identities = 96/278 (34%), Positives = 159/278 (57%)
Frame = +3
Query: 78 GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
GII+ S++ A P++ KK G R+ VDY+ LN + +PLPLIE + +++ + +F
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 258 TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
T LDL++ + + V K + +F PRG +E+ MP+G+ AP+ FQ FIN + + +
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGE-VK 557
Query: 438 DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
+ V+ Y+D++++ K E E ++ V ++ + L+ N KC F Q Q+ ++GY + +
Sbjct: 558 ESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617
Query: 618 GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
+P +E + V +K P+N K L+ FLG Y RKFI S + PL +LLKK V +
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677
Query: 798 FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDAS 911
+ +A E +K L PVL+ +D + + L TDAS
Sbjct: 678 WTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDAS 715
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 190 bits (463), Expect = 5e-49
Identities = 96/278 (34%), Positives = 159/278 (57%)
Frame = +3
Query: 78 GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
GII+ S++ A P++ KK G R+ VDY+ LN + +PLPLIE + +++ + +F
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 258 TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
T LDL++ + + V K + +F PRG +E+ MP+G+ AP+ FQ FIN + + +
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGE-VK 557
Query: 438 DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
+ V+ Y+D++++ K E E ++ V ++ + L+ N KC F Q Q+ ++GY + +
Sbjct: 558 ESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617
Query: 618 GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
+P +E + V +K P+N K L+ FLG Y RKFI S + PL +LLKK V +
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677
Query: 798 FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDAS 911
+ +A E +K L PVL+ +D + + L TDAS
Sbjct: 678 WTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDAS 715
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 190 bits (463), Expect = 5e-49
Identities = 96/278 (34%), Positives = 159/278 (57%)
Frame = +3
Query: 78 GIIKPSQSDFASPIVLAKKKNGKYRLCVDYRKLNTKIIKERFPLPLIEDQIDRLKDAMMF 257
GII+ S++ A P++ KK G R+ VDY+ LN + +PLPLIE + +++ + +F
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 258 TSLDLQNGFFHVNVNKDSQKYTSFVTPRGQYEFTKMPFGLCTAPSVFQRFINDVFQDLIL 437
T LDL++ + + V K + +F PRG +E+ MP+G+ AP+ FQ FIN + + +
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGE-VK 557
Query: 438 DGTVLSYLDDLILSFKYEYEGFLKLEMVFKRAEEYGLLFNWEKCIFMQKQINYLGYIVFD 617
+ V+ Y+D++++ K E E ++ V ++ + L+ N KC F Q Q+ ++GY + +
Sbjct: 558 ESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISE 617
Query: 618 GQISPSKEKVAAVANFKMPRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFN 797
+P +E + V +K P+N K L+ FLG Y RKFI S + PL +LLKK V +
Sbjct: 618 KGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWK 677
Query: 798 FDLDCEKAYEELKNILCQSPVLKIYDPNLETXLHTDAS 911
+ +A E +K L PVL+ +D + + L TDAS
Sbjct: 678 WTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDAS 715
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 30.3 bits (65), Expect = 0.76
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 636 KEKVAAVANFKM-PRNIKSLQSFLGLTGYFRKFIKNYSLIAKPLTDLLKKGVIFNFDLDC 812
K KV+ N ++ P N++++++ L L K + L+ K DLL G + +F +D
Sbjct: 132 KPKVSEAHNEEISPENVETIENELDLP-VKGKDEQTTGLVYKNANDLLT-GSLLSFIVDD 189
Query: 813 EKAYEELKNILC 848
+YE+ K +LC
Sbjct: 190 SFSYEQKKKLLC 201
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,753,355
Number of Sequences: 5004
Number of extensions: 94612
Number of successful extensions: 246
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 882067430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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