Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_G08_e447_14.seq
         (1579 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.        33   3.8  
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi...    33   3.8  
AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.             33   3.8  

>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
          Length = 3851

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = -3

Query: 1229 PKXXXGSGGPXQKRFPLXGGPVLKGPWSXETPXXXSG 1119
            P+   GSGGP Q  FP    P   GP +   P    G
Sbjct: 2986 PQYSAGSGGPTQNGFPAHQAPTYPGPSTYPAPAFPPG 3022


>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
            protein protein.
          Length = 3926

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = -3

Query: 1229 PKXXXGSGGPXQKRFPLXGGPVLKGPWSXETPXXXSG 1119
            P+   GSGGP Q  FP    P   GP +   P    G
Sbjct: 3061 PQYSAGSGGPTQNGFPAHQAPTYPGPSTYPAPAFPPG 3097


>AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.
          Length = 1571

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = -3

Query: 1229 PKXXXGSGGPXQKRFPLXGGPVLKGPWSXETPXXXSG 1119
            P+   GSGGP Q  FP    P   GP +   P    G
Sbjct: 706  PQYSAGSGGPTQNGFPAHQAPTYPGPSTYPAPAFPPG 742


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,893,267
Number of Sequences: 237096
Number of extensions: 3102009
Number of successful extensions: 8521
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8517
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23520548378
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)