Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_G07_e439_13.seq
(1546 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54664| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 7e-14
SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033) 38 0.028
SB_42689| Best HMM Match : Spectrin (HMM E-Value=0) 33 0.46
SB_36119| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.46
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 31 1.9
SB_34241| Best HMM Match : RuvA_C (HMM E-Value=1.5) 31 2.5
SB_21208| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.3
SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05) 30 4.3
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 30 4.3
SB_31651| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_39000| Best HMM Match : TolA (HMM E-Value=0.55) 30 4.3
SB_29783| Best HMM Match : PA14 (HMM E-Value=5e-05) 30 4.3
SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_4414| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 30 5.7
SB_22386| Best HMM Match : HLH (HMM E-Value=1.6e-13) 30 5.7
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.7
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 30 5.7
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.7
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_5458| Best HMM Match : E-MAP-115 (HMM E-Value=0.3) 29 7.5
SB_43150| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18) 29 7.5
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 29 7.5
SB_33628| Best HMM Match : BRF1 (HMM E-Value=1.8) 29 10.0
SB_32763| Best HMM Match : Histone_HNS (HMM E-Value=0.15) 29 10.0
>SB_54664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 76.2 bits (179), Expect = 7e-14
Identities = 43/137 (31%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
Frame = +2
Query: 104 IGEIWTRLFDHRPFLNGEIKFMLKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNG 283
I ++ RLFDHR L E K+ML+EFE KR DRE+E L + + ++++ I ++
Sbjct: 10 ISGVYARLFDHRAVLQAECKYMLREFEGKRNDRELERLRESEQKIRQVQEEIPKCITES- 68
Query: 284 ETALPVLIEKLNQALQLC-EVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQ 460
L L+E+L A + C E++ + ++Q + +++R E + + W+ FI ++ + +
Sbjct: 69 -VKLKDLLEELKVAREKCHEILVK---EEQDLFKERREEIFIESKKNWETFIGEIAEEEK 124
Query: 461 RIDNAFEEKEEELRDLY 511
R++ FE+ E+LR Y
Sbjct: 125 RVEEEFEQSAEKLRARY 141
>SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033)
Length = 311
Score = 37.5 bits (83), Expect = 0.028
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Frame = +2
Query: 188 KRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVL-IEKLNQALQLCEVVERDCFD 364
+R ++E+ L ++ + E E ++ KK E + + +EK N L EV ++ D
Sbjct: 51 RRAEKELNTLQHNVQ-IAEDACKEKEKAKKQMEQRMAEIGVEKGNVERSLEEVQSQNK-D 108
Query: 365 KQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNHKLSIAN 544
+ +E+ +AE K +++++ D+ + + + + EK E+RDL AD L ++
Sbjct: 109 LMQQAERAKAELA-KLSAKYEELEDEKDEMQESLSDTIREKSREIRDLEAD----LEMSE 163
Query: 545 N*TMDLKGSLVDTKL 589
DLK S +T+L
Sbjct: 164 QKYEDLKSSWNNTEL 178
>SB_42689| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1317
Score = 33.5 bits (73), Expect = 0.46
Identities = 28/117 (23%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Frame = +2
Query: 209 ENLFTILETLTEIKDSEADRIKKNGETA--LPVLIEKLNQALQLCEVVERD-CFDKQKVS 379
++LF E + ++ + IKK+ E + + V EK+NQ +Q + + D + + K++
Sbjct: 253 QDLFLSKEEVGATVEAVQELIKKHEEFSKRMDVQDEKINQMIQFAQRLANDGHYAQDKIT 312
Query: 380 EKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKE--EELRDLYADLNHKLSIAN 544
EK + H++R + + + QR+ +A + ++ ++ D+Y LN K +A+
Sbjct: 313 EKAQ-NLHERRNANRQK----LEAALQRLRDALQLQQFIQDAEDMYDWLNEKHQVAS 364
>SB_36119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 33.5 bits (73), Expect = 0.46
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 125 IVSKFHQSXRDNSVIASCRI-XCSPGXXH*XLERPPPRGSXS 3
I+S+ +QS R +S I R CSPG LERPPPR S +
Sbjct: 6 IISELNQSTRGDSPIVEKRSNSCSPGDPL-VLERPPPRWSSN 46
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 31.5 bits (68), Expect = 1.9
Identities = 19/84 (22%), Positives = 41/84 (48%)
Frame = +2
Query: 296 PVLIEKLNQALQLCEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNA 475
P E+ ++++ R+ + +K +++RAE DK + + +F ++ + + A
Sbjct: 4493 PEQAEEHRKSVEKAMAAARELEEVKKKLDEQRAENEDKLRQQNQEFEEEQRRRLEEEMGA 4552
Query: 476 FEEKEEELRDLYADLNHKLSIANN 547
FE++ EE + N K +A N
Sbjct: 4553 FEKQLEEEEEEEKKKNEKAILALN 4576
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 31.5 bits (68), Expect = 1.9
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +2
Query: 188 KRGDREVENLFTIL--ETLTEIKDSEADRIKKNGETALPVLIEKLNQALQLCEVVERDCF 361
K+ ++E+E +F I E ++KDSEA+ KK+ + + +L Q L+ E
Sbjct: 303 KKMEQEMEQVFDIKVKEKKKKLKDSEAELGKKHEQ-----MTNQLEQQLKELE------- 350
Query: 362 DKQKVSEKKRAEYHDKRQSE 421
+K+K EK++ EY D+R ++
Sbjct: 351 EKRKKFEKEKKEYEDQRLAD 370
>SB_34241| Best HMM Match : RuvA_C (HMM E-Value=1.5)
Length = 274
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -3
Query: 164 TLFRHLGMGDGRTIVSK---FHQSXRDNSVIASCRIXCSPGXXH*XLERPPPRGSXS 3
+L +HL G+ + I+ RD +A+ CSPG LERPPPR S +
Sbjct: 117 SLMKHLDKGELQEIMDSEENLDNILRDLEEVANSSNSCSPGDPL-VLERPPPRWSSN 172
>SB_21208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = -1
Query: 472 VINSLTFKIHIINKLVPFTLSFIMIFCSLFFTYLLFIKTIPFNYFTQL*GLIQFFN*NWK 293
V +TF+ H+ + +P+T S +I ++ F+Y +F+ + Y + L FN
Sbjct: 615 VKKDITFQKHMFLRCLPYTTSTGLIIRTVMFSYFIFMSLLCTLYAFKARKLPDNFNETRY 674
Query: 292 SCFTVLLYSISFTIFY 245
F++ + +S+ +Y
Sbjct: 675 IGFSLYVLLVSWIAYY 690
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 30.7 bits (66), Expect = 3.3
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Frame = +2
Query: 347 ERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNH 526
+R+ +K+ KKR EY ++ +Q D++ K ++I ++KE ELR L+A+ +
Sbjct: 1548 QRNTQEKELGLLKKRMEYTEEEIRRTEQ---DLSRKAEQI----KQKESELRRLFAESSS 1600
Query: 527 KLSIANN*TMDLKGSLVDTKLKIYPTKPLLEFI----KKIPSAC 646
I N L+ + I + + E+I K+IP C
Sbjct: 1601 DSRIRENMESRLRNERETQEQAIRVSTQIHEYISNQEKRIPIVC 1644
>SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1433
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 392 AEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEE 493
A +KR++EW +F D + FK Q F EK E
Sbjct: 150 AHVGNKRETEWTEFRDFVKFKSQISQEVFLEKGE 183
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 30.3 bits (65), Expect = 4.3
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Frame = +2
Query: 380 EKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAF----EEKEEELRDLYADLNHKLSIANN 547
E++ AE DK Q +W++ + +R+ A EE EE+ D + D N KL+
Sbjct: 1135 ERRLAERADKIQEQWERIRREHGDYKKRLTQAMIVLHEELMEEVND-WLDENEKLAD--- 1190
Query: 548 *TMDLKGSLVDTKLKIYPT-KPLLEFIKKIPSACKTPLNIS-KLIKENCXDQNNHES 712
++ +KG +++ + Y L E I+ K +++S +L++++ D + ES
Sbjct: 1191 -SIHVKGDDIESAKEEYTQYTELKEEIRAFDPTFKRAISLSEELLRDHLVDPDRAES 1246
>SB_31651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 827
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = -1
Query: 472 VINSLTFKIHIINKLVPFTLSFIMIFCSLFFTYLLFIKTIPFNYFTQL*GLIQFFN*NWK 293
V +TF+ H+ + +P+T S +I ++ F+Y +F+ + Y + L FN
Sbjct: 676 VRKDITFQKHMFLRCLPYTASTGLIIRAVMFSYFIFMSLLCTLYAFKARKLPDNFNEARY 735
Query: 292 SCFTVLLYSISFTIFY 245
F++ + +S+ +Y
Sbjct: 736 IGFSLYVLLVSWIAYY 751
>SB_39000| Best HMM Match : TolA (HMM E-Value=0.55)
Length = 576
Score = 30.3 bits (65), Expect = 4.3
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +2
Query: 170 LKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKLNQALQLCEVVE 349
LK+F+ K+ R E L L E + + D KK + +E ++ L++ E
Sbjct: 303 LKDFKTKQEKRLKE---IGLAELFEEEQRKRDEAKKRNDWLEQQRLEADSKRLEM----E 355
Query: 350 RDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDM 445
+ K+KV KR E H K+ EW +F +++
Sbjct: 356 MEALAKEKV---KRKEVHAKQVDEWSRFEEEL 384
>SB_29783| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1395
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 392 AEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEE 493
A +KR++EW +F D + FK Q F EK E
Sbjct: 150 AHVGNKRETEWTEFRDFVKFKSQISQEVFLEKGE 183
>SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1787
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +2
Query: 218 FTILETLTEIKDSEADRIKKNGETALPVLIEKLNQALQLCEVVERDCFDKQKVSE--KKR 391
F + + D ++ + + ++ +L QA +++ DK K + +++
Sbjct: 1351 FKLANCIINTADETREKSSPSDHELMGSMVSRLAQAENELRNAKKEIIDKDKKIKILQEK 1410
Query: 392 AEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRD 505
+ DK + I D+ KCQ + E EE L D
Sbjct: 1411 VQLLDKARGYSSGTIGDLERKCQALQAQVHEMEEFLAD 1448
>SB_4414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 877
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 200 REVENLFTILETLTEIKDSEADRIKKNGETAL-PVLIEKLNQALQLCEVVERDCFDKQKV 376
R ++N+F+ L ++ +KD E + + +I+ Q L + E C ++K
Sbjct: 113 RSIKNVFSSLHSVHRLKDLEITSPSQERTPGIRRKIIKSTEQFFGLGDCEEESCQIQRKW 172
Query: 377 SEKKRAEYHDKRQSEWDQFIDDM 445
+++K+ Y KR + +DD+
Sbjct: 173 TQRKKRHY-GKRYGGFADVVDDV 194
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.9 bits (64), Expect = 5.7
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Frame = +2
Query: 161 KFMLKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKLNQALQLCE 340
K ++ E+ + E+E++F + L E K ++ R KK L IE+L++ + +
Sbjct: 477 KLLVANEEKSTHEAEIEDIFKAHDEL-EAKYNDEVREKKE----LHEYIERLHEEQEDLQ 531
Query: 341 VVERDCFDKQKVSEKKRAEYH----DKRQSEWDQFID-------------DMNFKCQRID 469
+ KV + AE H + + Q D + C ++
Sbjct: 532 AQYCSLSKEHKVITDRLAEIHCSQLNSESQHYQQLTDLQQQNASLHEEFSQLKETCDTLN 591
Query: 470 NAFEEKEEELRDLYADLNHKLSIANN*TMDLKGSLVDTKLKIYPTKPLLEFIKKIPSACK 649
++FEEK+ EL DL L K + T L+ + + K + L +K+ + +
Sbjct: 592 SSFEEKDHELVDLTERLREKTREVESLTTQLEEAKSALQSKKQELENTLNELKQKKTQGE 651
Query: 650 TPLNISKLIKENCXDQNNHESEDVK 724
N L+K + + ED K
Sbjct: 652 LQRNTDSLLK-TVEELKQDKEEDFK 675
>SB_22386| Best HMM Match : HLH (HMM E-Value=1.6e-13)
Length = 470
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 530 LSIANN*TMDLKGSLVDTKLK--IYPTKPLLE--FIKKIPSACKTPLNISKLIKENCXDQ 697
LS+ NN + + SL D KL+ +Y + +++ + P++C +SKL+ N D+
Sbjct: 248 LSVPNNVLDNRRTSLQDVKLEQVVYLDRQVIKPVALNSSPNSCFQENYLSKLLANNKYDK 307
Query: 698 NNHESE 715
N E E
Sbjct: 308 NRVEEE 313
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/71 (21%), Positives = 38/71 (53%)
Frame = +2
Query: 242 EIKDSEADRIKKNGETALPVLIEKLNQALQLCEVVERDCFDKQKVSEKKRAEYHDKRQSE 421
+++DS D I+ + ET P + +L + +Q C + K+ + ++R + +++ E
Sbjct: 595 QLRDSNPDEIEIDFETLAPSTLRELEKYVQSCLRKKHKTPAKKPKNAEEREQEQARKKEE 654
Query: 422 WDQFIDDMNFK 454
++ + D++ K
Sbjct: 655 LERRLQDVSGK 665
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 29.9 bits (64), Expect = 5.7
Identities = 25/116 (21%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 152 GEIKFMLKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNGET-ALPVLIEKLNQAL 328
G+ + + ++ +E GD + + + L+EI + E + K+N ++ AL V+ +N
Sbjct: 91 GDEERLARKIKEALGDEYEDPISLHNQVLSEINEEELNEEKQNADSMALAVISPDVNDTT 150
Query: 329 QLCEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEE 496
EV + + K EKK+A R++ + + + R E +++E
Sbjct: 151 MALEVAAQ---QQIKELEKKQAAKIQHREALYAEMRKKEEERMSRERKERERRQQE 203
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 29.9 bits (64), Expect = 5.7
Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +2
Query: 203 EVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKLNQALQLCEVVERDCFD-KQKVS 379
++E+ ++LET + +S R+K + L L + ++ L++ V + S
Sbjct: 25 KLESTVSVLETSKKELNSTVIRLKGFFPSILKTLQSQKHELLEIKRNVTNMVQEISGHAS 84
Query: 380 EKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYADLN 523
EK R + +++ +D+ KC+++ + KE+E +DL + LN
Sbjct: 85 EKNRTITNMCSRNK--AIFEDLKNKCEKVSIDKDAKEKENKDLQSKLN 130
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.5 bits (63), Expect = 7.5
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Frame = +2
Query: 182 EEKRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKLNQALQL-CEVVERDC 358
E ++ + +++ F + E K +E K+N E L IE Q Q ++
Sbjct: 1391 EREKAEADLKEKFDLEEKALLDKLAE----KENSEHELMQRIESTEQENQAKLNQKDKSI 1446
Query: 359 FDKQKVSEKKRAEYHDK---RQSEWDQFIDDMNFKCQRIDNAFEEKEEELR 502
+ Q + + +++DK QS++ Q +++MN + ++ + KE+ELR
Sbjct: 1447 EELQASLDAVKKDFNDKLAETQSQYSQDMEEMNQAKKELEIKYSTKEKELR 1497
>SB_5458| Best HMM Match : E-MAP-115 (HMM E-Value=0.3)
Length = 274
Score = 29.5 bits (63), Expect = 7.5
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 434 IDDMNFKCQRIDNAFEEKEEELRDLYADL---NHKLSIANN*TMDLKGSLVDTKLKIYPT 604
+DD++ + +R A EEK+ R+LY L SI N + K K +
Sbjct: 79 LDDLH-QARRAQRAQEEKKRRERELYKQLVRDKEAYSIVRN--REEKAKEAALKAREKRE 135
Query: 605 KPLLEFIKKIPSACKTPLNISKLIKENCXDQNNHESEDVKQVHLXDK 745
K +++IKK S K K +K+ D+ E E ++ H +K
Sbjct: 136 KDRIKYIKKQESDLKRREQWQKEMKQK-KDEQVDEREKQREKHRQEK 181
>SB_43150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 616
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 392 AEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEE 493
A +KR++EW +F D + FK Q F EK E
Sbjct: 150 AHVGNKRETEWTEFRDFVKFKSQISRKVFLEKGE 183
>SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18)
Length = 808
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +2
Query: 341 VVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRD 505
+VE CF ++ + + K E ++ + +Q + + K + +++ EE E++LR+
Sbjct: 22 IVEFLCFKQRSLQKDKELEKERAKRKDLEQRLKKLQSKEKELNSIREETEQKLRE 76
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 29.5 bits (63), Expect = 7.5
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 DRIKKNGETALPVLIEKLNQALQLCEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDD 442
D ++ T + I N+A+ + V +D DKQ EK+ + +++Q E D+
Sbjct: 516 DNVEIKTVTHITEKISVENEAIVENQPVRQDDTDKQDKQEKENKQVEEEQQDE-PVKQDE 574
Query: 443 MNFKCQRIDNAFEEKEEELRDLYAD-LNHKLSIA 541
+ + ++ +EK+E+ D + +N +L +A
Sbjct: 575 QENRDEPVEQNEQEKQEKALDAVQNIINEELRMA 608
>SB_33628| Best HMM Match : BRF1 (HMM E-Value=1.8)
Length = 369
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 152 GEIKFMLK-EFEEKRGDREVENLFTILETL----TEIKDSEADRIKKNGE 286
GEI +++ E EEKRG EVE + + ET+ E+K + KK E
Sbjct: 29 GEIHLVVRQEMEEKRGRDEVEGVAKVYETVQRQGAELKALHEEAKKKQAE 78
>SB_32763| Best HMM Match : Histone_HNS (HMM E-Value=0.15)
Length = 481
Score = 29.1 bits (62), Expect = 10.0
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +2
Query: 74 TRQ*RSYHEXIGEIWTRLFDHRPFLNGEIKFMLKEFEEK-RGDREV-ENLFTILETLTEI 247
T + R E + TR F ++ E++ L E E+ R REV ++ F + ET ++
Sbjct: 49 TERSRKLMELVKSEETRNFQSEDTIS-ELRHRLDESEKLVRELREVLDSRFPVGETSSQE 107
Query: 248 KDSEADRIKKNGETALPVLIEKLNQALQLCEVVERDCFDKQKVSEKKRAEY 400
+ SE +GE A + E++ +Q C+ +E +++ E+++ E+
Sbjct: 108 EYSELSTRISDGEEARKEMKEEIIALVQRCKEMEEKLENERSRLEEEQTEH 158
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,588,862
Number of Sequences: 59808
Number of extensions: 562344
Number of successful extensions: 3129
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3108
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5035506333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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