Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_G07_e439_13.seq
(1546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 41 0.003
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 41 0.003
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 41 0.003
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 36 0.10
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 36 0.10
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 36 0.10
AC006742-6|AAF60498.1| 778|Caenorhabditis elegans Hypothetical ... 35 0.13
AC006742-3|AAF60501.1| 778|Caenorhabditis elegans Hypothetical ... 35 0.13
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 35 0.18
Z69662-4|CAA93504.1| 244|Caenorhabditis elegans Hypothetical pr... 33 0.72
U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence ... 32 0.95
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 32 1.3
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 32 1.3
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 32 1.3
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 32 1.3
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 29 1.4
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr... 31 1.7
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 31 1.7
AF099922-1|AAK21410.2| 509|Caenorhabditis elegans Hypothetical ... 31 2.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 2.9
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 31 2.9
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 31 2.9
Z29095-9|CAJ76941.1| 331|Caenorhabditis elegans Hypothetical pr... 31 2.9
Z29095-8|CAJ76940.1| 371|Caenorhabditis elegans Hypothetical pr... 31 2.9
U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical pr... 31 2.9
AF036705-9|AAO91724.1| 686|Caenorhabditis elegans Hypothetical ... 31 2.9
U80454-4|AAB37876.3| 896|Caenorhabditis elegans Prion-like-(q/n... 30 3.8
Z66515-13|CAA91355.1| 184|Caenorhabditis elegans Hypothetical p... 30 5.0
Z48638-11|CAA88572.1| 184|Caenorhabditis elegans Hypothetical p... 30 5.0
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 29 6.7
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical p... 29 8.8
Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical pr... 29 8.8
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 29 8.8
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 29 8.8
U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five) in... 29 8.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 8.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 8.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 8.8
AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical ... 29 8.8
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 40.7 bits (91), Expect = 0.003
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +2
Query: 230 ETLTEIKDSEADRIKKNGETALPVLIEKLNQALQL-CEVVERDCFDKQKVSEKKRAEYHD 406
E + KD+ + KK E A+ L E +A +L V RD K SE +
Sbjct: 631 EKIVREKDAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSELK--- 687
Query: 407 KRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNHK 529
+ +E + FI+++ + +++ N EK++E+ +L A++ K
Sbjct: 688 GKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEMRDK 728
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 40.7 bits (91), Expect = 0.003
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +2
Query: 230 ETLTEIKDSEADRIKKNGETALPVLIEKLNQALQL-CEVVERDCFDKQKVSEKKRAEYHD 406
E + KD+ + KK E A+ L E +A +L V RD K SE +
Sbjct: 633 EKIVREKDAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSELK--- 689
Query: 407 KRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNHK 529
+ +E + FI+++ + +++ N EK++E+ +L A++ K
Sbjct: 690 GKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEMRDK 730
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 40.7 bits (91), Expect = 0.003
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +2
Query: 230 ETLTEIKDSEADRIKKNGETALPVLIEKLNQALQL-CEVVERDCFDKQKVSEKKRAEYHD 406
E + KD+ + KK E A+ L E +A +L V RD K SE +
Sbjct: 633 EKIVREKDAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSELK--- 689
Query: 407 KRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNHK 529
+ +E + FI+++ + +++ N EK++E+ +L A++ K
Sbjct: 690 GKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEMRDK 730
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical protein
Y37A1B.1a protein.
Length = 1222
Score = 35.5 bits (78), Expect = 0.10
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 125 LFDHRPFLNGEIKFMLKEFEEKRGDREVENL-FTILETLTEIKDSEADRIKKNGETALPV 301
L D+R N E +F + F E + N FTI ETL D +A++ +++ PV
Sbjct: 810 LLDYRHDDNKENQFEVSLFAEAFKEMIERNAAFTIYETLANCGDRDAEKKRRDEAREKPV 869
Query: 302 LIEKLNQALQLCEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRID 469
++ + + E K E+K+ E +KR + D+ ++ K +RID
Sbjct: 870 EPKEPKEPAETTE--------KAAEGEEKKDEKEEKRDEKKDEKREEKREKVERID 917
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 35.5 bits (78), Expect = 0.10
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +2
Query: 146 LNGEIKFMLKEFEEKRGDREVENLFTILETLT-EIKDSEADRIKKNGETALPVLIEKLNQ 322
L E++ +E +E R D V+NL I+ L EIK SE+ +K E L + E
Sbjct: 329 LRDEVEVQDEEIKESRAD--VDNLRKIVNDLKHEIKMSESQMRRKKVEIML-IRKEIAKA 385
Query: 323 ALQLCEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELR 502
QL E + + F ++++ KK AE DKR+S + + + + + + +E+ +ELR
Sbjct: 386 QKQLREALGK--FGHEELT-KKLAEAEDKRESLNIEIEEIEHVQLKALRKKYEKLTKELR 442
Query: 503 D 505
+
Sbjct: 443 N 443
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 35.5 bits (78), Expect = 0.10
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 125 LFDHRPFLNGEIKFMLKEFEEKRGDREVENL-FTILETLTEIKDSEADRIKKNGETALPV 301
L D+R N E +F + F E + N FTI ETL D +A++ +++ PV
Sbjct: 810 LLDYRHDDNKENQFEVSLFAEAFKEMIERNAAFTIYETLANCGDRDAEKKRRDEAREKPV 869
Query: 302 LIEKLNQALQLCEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRID 469
++ + + E K E+K+ E +KR + D+ ++ K +RID
Sbjct: 870 EPKEPKEPAETTE--------KAAEGEEKKDEKEEKRDEKKDEKREEKREKVERID 917
>AC006742-6|AAF60498.1| 778|Caenorhabditis elegans Hypothetical
protein Y38C1AB.2 protein.
Length = 778
Score = 35.1 bits (77), Expect = 0.13
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -1
Query: 469 INSLTFKIHIINKLVPFTLSFIMIFCSLFFTYLLFIKTIPFNYFT 335
+ SL F IHI+ K++ L F++IFC+ +F + +I + F+
Sbjct: 405 MKSLGFFIHILKKMIKTVLMFVVIFCTFWFVLAVIHVSISRSIFS 449
>AC006742-3|AAF60501.1| 778|Caenorhabditis elegans Hypothetical
protein Y38C1AB.6 protein.
Length = 778
Score = 35.1 bits (77), Expect = 0.13
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -1
Query: 469 INSLTFKIHIINKLVPFTLSFIMIFCSLFFTYLLFIKTIPFNYFT 335
+ SL F IHI+ K++ L F++IFC+ +F + +I + F+
Sbjct: 405 MKSLGFFIHILKKMIKTVLMFVVIFCTFWFVLAVIHVSISRSIFS 449
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 34.7 bits (76), Expect = 0.18
Identities = 34/156 (21%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Frame = +2
Query: 167 MLKEFEEKRGD--REVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKLNQALQLCE 340
+L++FE G +E+ E L I SE + + E + +++Q L+L E
Sbjct: 154 LLRKFERVVGSFHKELSEKKHENERLQRIYASEREMYNRRMEE----MESEVDQQLELTE 209
Query: 341 VVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYADL 520
+ R +++ K++ E + E + +++ + Q+++ A E + E L +L
Sbjct: 210 MKARQ--EERDRLTKEKEEMRQRMSDEMSEMRNNIE-RLQKMEKALERENERLNH-QKEL 265
Query: 521 NHKLSIANN*TMDLKGSLVDTKLKIYPTKPLLEFIK 628
+ KL + N DL+ +L + L++ K L ++
Sbjct: 266 SDKLKVVNEENNDLRQNLAENHLELAMIKSELAQVR 301
>Z69662-4|CAA93504.1| 244|Caenorhabditis elegans Hypothetical
protein F56D5.5 protein.
Length = 244
Score = 32.7 bits (71), Expect = 0.72
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 401 HDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNHK 529
H + DQF+D + + + + A +EKEEE++ L D+ K
Sbjct: 119 HQPQLPAEDQFVDFLQTETRSVKEALKEKEEEVKRLLVDMEGK 161
>U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 10 protein.
Length = 490
Score = 32.3 bits (70), Expect = 0.95
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +2
Query: 173 KEFEEKRGDREVENLFTILETLTEIKDS--EADRIKKNGETALPVLIEKLNQALQLCEVV 346
+E EE++ R +E L LE+ + + EA I N E +PV+IEK++Q ++ EV+
Sbjct: 251 QEMEERK--RHIEELRDCLESSKKGLQAKLEAREICINSEKNVPVIIEKIHQWTEVREVI 308
Query: 347 ERDCFDKQKVSEKKRAEYHDK 409
D D + + +K E ++
Sbjct: 309 -IDLIDVESENLRKLKEMEEQ 328
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/91 (21%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 236 LTEIKDSEADRIKKNGETALPVLIEKLNQALQLCEVVERDCFDKQKVSEKKRAEYHDKRQ 415
+ E++ +E DR+K+ + L +KL++ ++ E ++ + ++ EKK + +K+
Sbjct: 31 VAEMEGAELDRVKRASDHKLE---KKLDEIMEKVEKIKDKIEENKEKREKKNKKKGNKKD 87
Query: 416 SEWDQFID-DMNFKCQRIDNAFEEKEEELRD 505
+ ++ D D K ++ + EE+E++ +D
Sbjct: 88 EDEEEEEDKDKKKKDKKKNKDSEEEEDKKKD 118
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 31.9 bits (69), Expect = 1.3
Identities = 29/122 (23%), Positives = 55/122 (45%)
Frame = +2
Query: 155 EIKFMLKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKLNQALQL 334
E+K L+E +KR D E E L + + + +R + +TA KL QA +
Sbjct: 38 EVKRQLEEERKKREDAEAE--VAALNRRIVLVEEDLERTEDRLKTAT----SKLEQATKA 91
Query: 335 CEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYA 514
+ D+ + S + R++ ++R + + +D+ + D +EE +L + A
Sbjct: 92 ADEA-----DRARKSMETRSQQDEERANFLETQVDEAKVIAEDADRKYEEVARKLAMVEA 146
Query: 515 DL 520
DL
Sbjct: 147 DL 148
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 31.9 bits (69), Expect = 1.3
Identities = 29/122 (23%), Positives = 55/122 (45%)
Frame = +2
Query: 155 EIKFMLKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKLNQALQL 334
E+K L+E +KR D E E L + + + +R + +TA KL QA +
Sbjct: 38 EVKRQLEEERKKREDAEAE--VAALNRRIVLVEEDLERTEDRLKTAT----SKLEQATKA 91
Query: 335 CEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYA 514
+ D+ + S + R++ ++R + + +D+ + D +EE +L + A
Sbjct: 92 ADEA-----DRARKSMETRSQQDEERANFLETQVDEAKVIAEDADRKYEEVARKLAMVEA 146
Query: 515 DL 520
DL
Sbjct: 147 DL 148
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 31.9 bits (69), Expect = 1.3
Identities = 29/122 (23%), Positives = 55/122 (45%)
Frame = +2
Query: 155 EIKFMLKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKLNQALQL 334
E+K L+E +KR D E E L + + + +R + +TA KL QA +
Sbjct: 38 EVKRQLEEERKKREDAEAE--VAALNRRIVLVEEDLERTEDRLKTAT----SKLEQATKA 91
Query: 335 CEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYA 514
+ D+ + S + R++ ++R + + +D+ + D +EE +L + A
Sbjct: 92 ADEA-----DRARKSMETRSQQDEERANFLETQVDEAKVIAEDADRKYEEVARKLAMVEA 146
Query: 515 DL 520
DL
Sbjct: 147 DL 148
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.1 bits (62), Expect(2) = 1.4
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 425 DQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNHKLSIANN*TMDLKGSLVDTKLKIY-- 598
D+ DD+N QRIDN E+ + E ++ A L +K+ +L+G +V + ++
Sbjct: 112 DRTQDDLNKFRQRIDNNVEQ-QREYSEMMAALQNKVHEYRKHIAELEGRMVGARNRMLDD 170
Query: 599 PTKPLLEF 622
PT ++ F
Sbjct: 171 PTSNVMIF 178
Score = 21.0 bits (42), Expect(2) = 1.4
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = +2
Query: 380 EKKRAEYHDKRQSEWDQFIDD 442
+K E HD WD++ D
Sbjct: 59 KKSEEEIHDFDMGSWDEYSRD 79
>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical protein
C28G1.4 protein.
Length = 1081
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 302 LIEKLNQALQLCEVVERDCFDKQKV--SEKKRAEYHDKRQSEWDQF-IDDMNFKCQRIDN 472
L+ +LN A++ ++ +K K+ S K +A + K+ S +F D +FKC ++N
Sbjct: 886 LLNRLNAAIK--RPIKEPVREKNKLPMSSKAKAAHRSKQFSSTVEFRCDKCDFKCASVNN 943
Query: 473 AFEEKE 490
+FE +
Sbjct: 944 SFEHSD 949
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 31.5 bits (68), Expect = 1.7
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Frame = +2
Query: 119 TRLFDHRPFLNGEIKFMLKEFEEKRGDREVENLFTIL-------ETLTEIKDSEADRI-K 274
TR RPFL + F L E + + ++ E FT+ + +T+I+D D +
Sbjct: 102 TRKLKSRPFLGEKSSFKLGEIPKPKEEKRREEPFTMRGFDFGSDDKVTKIRDKICDIVDP 161
Query: 275 KNGETALPVLIEKLNQ-ALQLCEVVERDCFDKQKVSEKKRA 394
N P I ++++ L+ EV F K + K RA
Sbjct: 162 TNARRTDPNFIRQMHENTLKGIEVASNPHFKKTRAPTKNRA 202
>AF099922-1|AAK21410.2| 509|Caenorhabditis elegans Hypothetical
protein F56F11.5 protein.
Length = 509
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 469 INSLTFKIHIINKLVPFTLSFIMIFCSLFFTYLLFIKTIPFNYFT 335
I SL F +HI+ K++ F+ IFC+ +F + +I + F+
Sbjct: 327 IKSLGFFVHILKKMMKTVGMFVFIFCTFWFVLAVVHVSISRSMFS 371
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 2.9
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +1
Query: 1282 PPPGPHXXPXSPXTXGAXFXSXPPRFGAX--XXPL*GSPPPXXXP 1410
PPPGP P P PP G P+ G+PPP P
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 30.7 bits (66), Expect = 2.9
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = +2
Query: 197 DREVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKL 316
D EVENL L T I D GE P+L EKL
Sbjct: 373 DSEVENLLDYLSTAMNISDKVFSEFMVVGEETTPLLKEKL 412
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 30.7 bits (66), Expect = 2.9
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = +2
Query: 197 DREVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKL 316
D EVENL L T I D GE P+L EKL
Sbjct: 373 DSEVENLLDYLSTAMNISDKVFSEFMVVGEETTPLLKEKL 412
>Z29095-9|CAJ76941.1| 331|Caenorhabditis elegans Hypothetical
protein R10E11.6b protein.
Length = 331
Score = 30.7 bits (66), Expect = 2.9
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 206 VENLFTILETLTEI-KDSEADRIKKNGETAL-PVLIEKLNQALQLCEVVERDCFDKQKVS 379
V ++ ++E ++ KDS+ + I++ ET + L++A E V + + V
Sbjct: 237 VHAIYIVVEEANQLFKDSKKEVIQEISETEKGSAYFKSLSKAFDTLERVCKSAGVQLSVQ 296
Query: 380 EKKRAEYHDKRQSEWDQFID 439
K AEY + +W+ F+D
Sbjct: 297 STKEAEYCRNLRRKWETFMD 316
>Z29095-8|CAJ76940.1| 371|Caenorhabditis elegans Hypothetical
protein R10E11.6a protein.
Length = 371
Score = 30.7 bits (66), Expect = 2.9
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 206 VENLFTILETLTEI-KDSEADRIKKNGETAL-PVLIEKLNQALQLCEVVERDCFDKQKVS 379
V ++ ++E ++ KDS+ + I++ ET + L++A E V + + V
Sbjct: 237 VHAIYIVVEEANQLFKDSKKEVIQEISETEKGSAYFKSLSKAFDTLERVCKSAGVQLSVQ 296
Query: 380 EKKRAEYHDKRQSEWDQFID 439
K AEY + +W+ F+D
Sbjct: 297 STKEAEYCRNLRRKWETFMD 316
>U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical
protein W03B1.2 protein.
Length = 814
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 469 INSLTFKIHIINKLVPFTLSFIMIFCSLFF 380
I SL F IH+ K++ FI+IFC+ +F
Sbjct: 467 IQSLGFFIHLFKKMMKTVGMFILIFCTFWF 496
>AF036705-9|AAO91724.1| 686|Caenorhabditis elegans Hypothetical
protein F37C4.2 protein.
Length = 686
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = -1
Query: 361 KTIPFNYFTQL*GLIQFFN*NWKSCFTVLLYSISFTIFYFSQCL*NSEEVFYFSVTSLFL 182
KT+ +YFT L I F W + Y + IF S L ++ Y+ V L L
Sbjct: 123 KTVAEDYFTMLSIAIDIFTHTWSLSVEIQFYFLVPFIFLLSTKLPGKQQYGYYGVIGLSL 182
Query: 181 KLF 173
F
Sbjct: 183 VYF 185
>U80454-4|AAB37876.3| 896|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 66
protein.
Length = 896
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 469 INSLTFKIHIINKLVPFTLSFIMIFCSLFF 380
I S+ F +HI K++ FI+IFC+ +F
Sbjct: 423 IQSIGFFVHIFKKMMKTVGMFILIFCTFWF 452
>Z66515-13|CAA91355.1| 184|Caenorhabditis elegans Hypothetical
protein R53.8 protein.
Length = 184
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +2
Query: 248 KDSEADRIKKNGETALPVLI-----EKLNQALQLCEVVERDCFDKQKVSEKKRAEYHDKR 412
K+S+ ++K GE PV++ + N + +V +++ D+QK ++K+ + DK+
Sbjct: 92 KESKIVKLKAKGELKKPVIVSIKDKKNGNSVKVMVKVEDQESADQQKKDQEKKEQDGDKK 151
Query: 413 QSE 421
E
Sbjct: 152 DKE 154
>Z48638-11|CAA88572.1| 184|Caenorhabditis elegans Hypothetical
protein R53.8 protein.
Length = 184
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +2
Query: 248 KDSEADRIKKNGETALPVLI-----EKLNQALQLCEVVERDCFDKQKVSEKKRAEYHDKR 412
K+S+ ++K GE PV++ + N + +V +++ D+QK ++K+ + DK+
Sbjct: 92 KESKIVKLKAKGELKKPVIVSIKDKKNGNSVKVMVKVEDQESADQQKKDQEKKEQDGDKK 151
Query: 413 QSE 421
E
Sbjct: 152 DKE 154
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 29.5 bits (63), Expect = 6.7
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 14/169 (8%)
Frame = +2
Query: 116 WTRLFDH-RPFLNGEIKFMLKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNGETA 292
W RLF +P L G E EK+ EN E + D +I + ET
Sbjct: 832 WYRLFSRLKPMLKGMKSNAEIEALEKKCKELEENHKREEEARKKYADELRAKIDQYEETK 891
Query: 293 LP-----VLIEKLNQALQ-----LCEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDD 442
+L++K N+ ++ L E + + +K SE +R +K + EWD+
Sbjct: 892 AAHERDRMLLDKRNKEIEELNRNLKAESESNYENAKKASELERLR--EKEKKEWDEKERR 949
Query: 443 MNFKCQRIDNAFEEKEEELRDLYADLN---HKLSIANN*TMDLKGSLVD 580
M + + N + + E+L+D + L K+S + LVD
Sbjct: 950 MQMEAENEANQHKTQTEKLKDQISTLQTDFEKVSAQRKAQEQMNAELVD 998
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical protein
T06E4.4 protein.
Length = 290
Score = 29.5 bits (63), Expect = 6.7
Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = -2
Query: 1362 PKXGXXRXKXGPXGXRGXXXXMGPRGGXXQXXEXXGXKXPNPGXA--SXXXLSXTKXPXM 1189
P G R + P G G GP GG Q + G P P A + P
Sbjct: 190 PGQGGQRSRGTP-GPSGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGNAGTPGT 248
Query: 1188 XGGPSNTG 1165
G P N G
Sbjct: 249 PGAPGNAG 256
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 29.5 bits (63), Expect = 6.7
Identities = 30/153 (19%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Frame = +2
Query: 146 LNGEIKFMLKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKLNQA 325
L E+ +++ E ++ + + + + E L++++ + +K ET ++ L +
Sbjct: 1451 LRNELTARIEQLESQKSNEQAQ----MSEKLSQVESMKVQIEQKLYETREE--LDDLKKE 1504
Query: 326 LQLCEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRID---NAFEEKEEE 496
L+L E+ + + S +E++D ++ D ID M + ++ A +++ +
Sbjct: 1505 LKLKEI---ELQKASEASTTASSEWNDDGWNDDDGEIDRMKDTQKVLEMKVEALQDELQR 1561
Query: 497 LRDLYADLNHKLSIANN*TMDLKGSLVDTKLKI 595
L+D +L +S + D++ L DTK K+
Sbjct: 1562 LKDNEIELTETISALQSKLYDVQSELEDTKQKL 1594
>Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical
protein F45G2.2b protein.
Length = 390
Score = 29.1 bits (62), Expect = 8.8
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Frame = +2
Query: 182 EEKRGDREVENLFTILETLTEIKDS-EADRI---KKNGETALPVLIEKLNQALQLCEVVE 349
EE+ + + L ++ E K + E DR+ K+N E IE+LN+ L+ E
Sbjct: 24 EEEARKKYADELRAKIDQYEETKAAHERDRMLLDKRNKE------IEELNRNLKAES--E 75
Query: 350 RDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYADLN-- 523
+ + +K SE +R +K + EWD+ M + + N + + E+L+D + L
Sbjct: 76 SNYENAKKASELERLR--EKEKKEWDEKERRMQMEAENEANQHKTQTEKLKDQISTLQTD 133
Query: 524 -HKLSIANN*TMDLKGSLVD 580
K+S + LVD
Sbjct: 134 FEKVSAQRKAQEQMNAELVD 153
>Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical
protein K04B12.3 protein.
Length = 891
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/86 (20%), Positives = 42/86 (48%)
Frame = +2
Query: 140 PFLNGEIKFMLKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKLN 319
P N +KF+ F ++ + +EN+ ++ L + D + + +K+ +TA+ I+++
Sbjct: 286 PSNNSFVKFLEDNFRSEKNEISLENVIELMNCLQCVLDGDLE--EKHEKTAIQTFIKRIQ 343
Query: 320 QALQLCEVVERDCFDKQKVSEKKRAE 397
E R + Q+ E++ A+
Sbjct: 344 N--DHMEEARRLYTNAQRPGERRGAD 367
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.1 bits (62), Expect = 8.8
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 425 DQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNHKLSIANN*TMDLKGSLVDTKLKIY-- 598
D+ DD+N QRIDN E+ + E ++ A L +K+ +L+G +V + ++
Sbjct: 185 DRTQDDLNKFRQRIDNNVEQ-QREYSEMMAALQNKVHEYRKHIAELEGRMVGARNRMLDD 243
Query: 599 PTKPLLEF 622
PT ++ F
Sbjct: 244 PTSNVMIF 251
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.1 bits (62), Expect = 8.8
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 425 DQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNHKLSIANN*TMDLKGSLVDTKLKIY-- 598
D+ DD+N QRIDN E+ + E ++ A L +K+ +L+G +V + ++
Sbjct: 185 DRTQDDLNKFRQRIDNNVEQ-QREYSEMMAALQNKVHEYRKHIAELEGRMVGARNRMLDD 243
Query: 599 PTKPLLEF 622
PT ++ F
Sbjct: 244 PTSNVMIF 251
>U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform e protein.
Length = 372
Score = 29.1 bits (62), Expect = 8.8
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 425 DQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNHKLSIANN*TMDLKGSLVDTKLKIY-- 598
D+ DD+N QRIDN E+ + E ++ A L +K+ +L+G +V + ++
Sbjct: 185 DRTQDDLNKFRQRIDNNVEQ-QREYSEMMAALQNKVHEYRKHIAELEGRMVGARNRMLDD 243
Query: 599 PTKPLLEF 622
PT ++ F
Sbjct: 244 PTSNVMIF 251
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 1285 PPGPHXXPXSPXTXGAXFXSXPPRFGAXXXPL*GSPPP 1398
PP P SP G+ PP G+ P GSPPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 274
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +1
Query: 1282 PPPGPHXXP-----XSPXTXGAXFXSXPPRFGAXXXPL*GSPPP 1398
PPP P P SP A PPR G+ P GSPPP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 1285 PPGPHXXPXSPXTXGAXFXSXPPRFGAXXXPL*GSPPP 1398
PP P SP G+ PP G+ P GSPPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 295
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +1
Query: 1282 PPPGPHXXP-----XSPXTXGAXFXSXPPRFGAXXXPL*GSPPP 1398
PPP P P SP A PPR G+ P GSPPP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 1285 PPGPHXXPXSPXTXGAXFXSXPPRFGAXXXPL*GSPPP 1398
PP P SP G+ PP G+ P GSPPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 280
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +1
Query: 1282 PPPGPHXXP-----XSPXTXGAXFXSXPPRFGAXXXPL*GSPPP 1398
PPP P P SP A PPR G+ P GSPPP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
>AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical
protein C55B7.5 protein.
Length = 446
Score = 29.1 bits (62), Expect = 8.8
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 182 EEKRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVLIEKL-NQALQLCEVVERDC 358
+E+ GD + ENL +E L + D I+K+ + + +K+ Q +++ E+VE +
Sbjct: 275 DEEEGDDDEENLNNSVEELDSDDYASDDNIEKSNNSDQQLKSKKIETQVIKVEEIVE-ET 333
Query: 359 FDKQKVSEKK 388
K V KK
Sbjct: 334 VTKTTVKRKK 343
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,636,922
Number of Sequences: 27780
Number of extensions: 486482
Number of successful extensions: 1630
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1625
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4452547242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -