Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_G07_e439_13.seq
         (1546 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    28   0.25 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   4.0  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   7.1  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   7.1  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   7.1  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 27.9 bits (59), Expect = 0.25
 Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
 Frame = +2

Query: 140 PFLNGEIKFML-KEFEEKRGD-REVENLFTI 226
           PF N EIKF L +EFEE+  D R+V+++ T+
Sbjct: 57  PFKNTEIKFKLGEEFEEETVDGRKVKSVCTL 87


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly protein
            9 protein.
          Length = 423

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 1108 SKIXXGGPSLXPAPNXSF 1055
            +KI  GGP L P PN S+
Sbjct: 96   NKIGNGGPLLEPYPNWSW 113


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 1105 KIXXGGPSLXPAPNXSF 1055
            K+  GGP L P P+ SF
Sbjct: 96   KVGDGGPLLQPYPDWSF 112


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly protein
            MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 1105 KIXXGGPSLXPAPNXSF 1055
            K+  GGP L P P+ SF
Sbjct: 96   KVGDGGPLLQPYPDWSF 112


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly protein
            MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 1105 KIXXGGPSLXPAPNXSF 1055
            K+  GGP L P P+ SF
Sbjct: 96   KVGDGGPLLQPYPDWSF 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 322,078
Number of Sequences: 438
Number of extensions: 5745
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 54190125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)