Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_G07_e439_13.seq
(1546 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g39300.1 68415.m04825 expressed protein ; expression supporte... 33 0.38
At1g47900.1 68414.m05334 expressed protein 32 1.2
At1g70750.1 68414.m08155 expressed protein contains Pfam profile... 31 2.0
At1g49730.3 68414.m05576 protein kinase family protein contains ... 31 2.0
At1g49730.2 68414.m05577 protein kinase family protein contains ... 31 2.0
At1g49730.1 68414.m05575 protein kinase family protein contains ... 31 2.0
At1g01690.1 68414.m00087 expressed protein 31 2.0
At1g67590.1 68414.m07700 remorin family protein contains Pfam do... 30 3.6
At5g58320.2 68418.m07301 kinase interacting protein-related low ... 30 4.7
At5g58320.1 68418.m07300 kinase interacting protein-related low ... 30 4.7
At1g74870.1 68414.m08677 expressed protein contains similarity t... 30 4.7
At3g43600.1 68416.m04639 aldehyde oxidase, putative identical to... 29 8.2
At3g23910.1 68416.m03004 expressed protein 29 8.2
At2g18780.1 68415.m02186 F-box family protein contains F-box dom... 29 8.2
>At2g39300.1 68415.m04825 expressed protein ; expression supported
by MPSS
Length = 768
Score = 33.5 bits (73), Expect = 0.38
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Frame = +2
Query: 170 LKEFEEKRGDREVENLFTILETLTEIKDSEAD-RIKKNGETALPVLIEKLNQALQLCEVV 346
+++ EE+R E L + + E + D R KN L +EK LQ+
Sbjct: 295 IRQMEEERVGLAFEVLSLLRSQMDERASTREDIRRVKNDWDLLLKRLEKEKTELQVQLET 354
Query: 347 ERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNH 526
E D + S+ + + +KR E + + + N QR + F EKE E D+ L+
Sbjct: 355 ELDRRSSEWTSKVESFKVEEKRLRERVRELAEHNVSLQREISTFHEKETERIDMIRHLDE 414
Query: 527 KLS 535
++
Sbjct: 415 TVT 417
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/62 (27%), Positives = 36/62 (58%)
Frame = +2
Query: 359 FDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEEELRDLYADLNHKLSI 538
+D Q + + + E ++++ ++++ ID + K +EE+ ++L + DLN KLS+
Sbjct: 69 YDVQVKTYENQVESYEEQVKDFEEQIDAYDEKVHE----YEEQVQKLNEDVEDLNEKLSV 124
Query: 539 AN 544
AN
Sbjct: 125 AN 126
>At1g70750.1 68414.m08155 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593; supporting
cDNA gi|4101563|gb|AF004556.1|AF004556
Length = 442
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +2
Query: 188 KRGDREVENLFTILETLTEIKDSEADRIKKNGETAL 295
K+GD+ V L IL+ L ++++ + R+++NG+ +L
Sbjct: 407 KKGDKGVHLLHEILQHLRDLRNIDLTRVRENGDMSL 442
>At1g49730.3 68414.m05576 protein kinase family protein contains
Pfam PF00069: Protein kinase domain; similar to AtPK2324
(GI:1785621) [Arabidopsis thaliana]; similar to
receptor-like protein kinase (GI:1644291) [Catharanthus
roseus]; similar to somatic embryogenesis receptor-like
kinase (GI:2224911) [Daucus carota]
Length = 394
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 137 DGRTIVSKFHQSXRDNSVIASCRIXCSPG 51
DGRT V++ HQS V +CR+ SPG
Sbjct: 63 DGRTTVTQMHQSPGFGHVSRNCRLPFSPG 91
>At1g49730.2 68414.m05577 protein kinase family protein contains
Pfam PF00069: Protein kinase domain; similar to AtPK2324
(GI:1785621) [Arabidopsis thaliana]; similar to
receptor-like protein kinase (GI:1644291) [Catharanthus
roseus]; similar to somatic embryogenesis receptor-like
kinase (GI:2224911) [Daucus carota]
Length = 450
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 137 DGRTIVSKFHQSXRDNSVIASCRIXCSPG 51
DGRT V++ HQS V +CR+ SPG
Sbjct: 119 DGRTTVTQMHQSPGFGHVSRNCRLPFSPG 147
>At1g49730.1 68414.m05575 protein kinase family protein contains
Pfam PF00069: Protein kinase domain; similar to AtPK2324
(GI:1785621) [Arabidopsis thaliana]; similar to
receptor-like protein kinase (GI:1644291) [Catharanthus
roseus]; similar to somatic embryogenesis receptor-like
kinase (GI:2224911) [Daucus carota]
Length = 663
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 137 DGRTIVSKFHQSXRDNSVIASCRIXCSPG 51
DGRT V++ HQS V +CR+ SPG
Sbjct: 119 DGRTTVTQMHQSPGFGHVSRNCRLPFSPG 147
>At1g01690.1 68414.m00087 expressed protein
Length = 742
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = +2
Query: 131 DHRPFLNGEIKFMLKEFEEKRGDREVENLFTILETLTEIKDSEADRIKK 277
D + L+G +KF+L+EF + +++ + +L T+ E ++ +I++
Sbjct: 194 DSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETALQKIQR 242
>At1g67590.1 68414.m07700 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 347
Score = 30.3 bits (65), Expect = 3.6
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +2
Query: 191 RGDREVENLFTILETLTEIKDSEADRIKK-NGETALPVLIEKLNQALQLCEVVERDCFDK 367
R + E + ++ET+TE++ E++ +K NG + + + ER F
Sbjct: 187 RASQRGEAVGVVMETVTEVRRVESNNSEKVNGFVESKKAMSAMEARAMAWDEAERAKFMA 246
Query: 368 QKVSEKKRA---EYHDKRQSEWDQFIDDMNFKCQRIDNAFEEK 487
+ E+ + E H+KR++E + + M K +R+ EEK
Sbjct: 247 RYKREEVKIQAWENHEKRKAEME--MKKMEVKAERMKARAEEK 287
>At5g58320.2 68418.m07301 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 558
Score = 29.9 bits (64), Expect = 4.7
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Frame = +2
Query: 170 LKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVL-IEKLNQALQLCEVV 346
LK+ EK + E + ++ + L S D + G + L IE L++ L++ +
Sbjct: 253 LKDVNEKLQNSE-DQIYILKSQLARYLPSGLDDEQSEGAASTQELDIETLSEELRITSLR 311
Query: 347 ERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEE-------ELRD 505
R+ +KQ +K E K + + DM Q+ A++ K +L D
Sbjct: 312 LREA-EKQNGIMRKEVE-KSKSDDAKLKSLQDMLESAQKEAAAWKSKASADKREVVKLLD 369
Query: 506 LYADLNHKLSIANN*TMDLKGSLVDTKLKIYPTK 607
+ L L+ ++ DLK +L D + KI+P K
Sbjct: 370 RISMLKSSLAGRDHEIRDLKTALSDAEEKIFPEK 403
>At5g58320.1 68418.m07300 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 490
Score = 29.9 bits (64), Expect = 4.7
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Frame = +2
Query: 170 LKEFEEKRGDREVENLFTILETLTEIKDSEADRIKKNGETALPVL-IEKLNQALQLCEVV 346
LK+ EK + E + ++ + L S D + G + L IE L++ L++ +
Sbjct: 253 LKDVNEKLQNSE-DQIYILKSQLARYLPSGLDDEQSEGAASTQELDIETLSEELRITSLR 311
Query: 347 ERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMNFKCQRIDNAFEEKEE-------ELRD 505
R+ +KQ +K E K + + DM Q+ A++ K +L D
Sbjct: 312 LREA-EKQNGIMRKEVE-KSKSDDAKLKSLQDMLESAQKEAAAWKSKASADKREVVKLLD 369
Query: 506 LYADLNHKLSIANN*TMDLKGSLVDTKLKIYPTK 607
+ L L+ ++ DLK +L D + KI+P K
Sbjct: 370 RISMLKSSLAGRDHEIRDLKTALSDAEEKIFPEK 403
>At1g74870.1 68414.m08677 expressed protein contains similarity to
hypothetical proteins
Length = 289
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 344 VERDCFDKQKVSEKKRAEYHDKRQSEWDQFIDDMN-FKCQRIDNA---FEEKEEELRDLY 511
V DCF K ++ E D WD F D +N F+ +++ E+ E+E DL
Sbjct: 108 VSGDCFCCSKQMTEEEEEVFDDAYDNWDGFKDALNSFENDNNESSRLVTEDFEQEEEDLI 167
Query: 512 ADLNHKLS 535
D + +++
Sbjct: 168 PDTSQRMN 175
>At3g43600.1 68416.m04639 aldehyde oxidase, putative identical to
gi: 3172025; identical to cDNA putative aldehyde oxidase
(AO3) mRNA, partial cds GI:2792303
Length = 1321
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +2
Query: 296 PVLIEKLNQALQLCEVVERDCFDKQKVSEKKRAEYHDKRQSEWDQFID 439
P +E+L+ L+ C+ K Y D+R+ +D++ID
Sbjct: 225 PASVEELSSLLEACKANSNTVSMKLVAGNTSMGYYKDEREQNYDKYID 272
>At3g23910.1 68416.m03004 expressed protein
Length = 421
Score = 29.1 bits (62), Expect = 8.2
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = +2
Query: 170 LKEFEEKRGD---REVENLFTILETL-TEIKDSEADRIKKNGETALPVLIEKLNQA-LQL 334
+KE E+ GD +VE+ LE L E++ EA+ K + E IE+L+Q+ Q
Sbjct: 57 VKEIVEEYGDVDLLDVEDSDAYLEYLRNELQSVEAESAKVSEE------IERLSQSHAQD 110
Query: 335 CEVVERDC------FDKQKVSEKKRAEYHDKRQSEWD--QFIDDMNFKCQRIDNAFEEKE 490
++RD D + ++++ + S + + IDD FK ++N EEK
Sbjct: 111 SSRLQRDLEGLLLSLDSMSSQDVEKSKENQPSSSSMEVCEVIDDDKFKMFELENQMEEKR 170
Query: 491 EELRDL 508
L+ L
Sbjct: 171 MILKSL 176
>At2g18780.1 68415.m02186 F-box family protein contains F-box domain
Pfam:PF00646
Length = 370
Score = 29.1 bits (62), Expect = 8.2
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 419 HFVFYHDILLSFFHLPSVYQNNPFQLLHTIVRLDSIFQLELEELFH 282
H V D +S F L ++ NP + L +V LD Q+++ +FH
Sbjct: 67 HVVMMLDFRVSLFSL-NLLNPNPIERLGQLVSLDGGAQVDISNIFH 111
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,058,027
Number of Sequences: 28952
Number of extensions: 433192
Number of successful extensions: 1151
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4144594560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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