Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_G06_e431_14.seq
         (1533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    31   0.023
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    31   0.023
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   3.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 31.1 bits (67), Expect = 0.023
 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = -3

Query: 637 IXYCIY--AIXKXTVFINLHTCIYNSKYTINV-KITTLIQYFAAPLLTPLPYKMFIRKKK 467
           + YCI   AI   T    L  C    KY+  + KITT++Q + + LL  L Y   I  +K
Sbjct: 37  LVYCIIFGAIATLTCIEGLRDC--PRKYSTPLAKITTILQRYCSVLLVFLTYFFNILFRK 94

Query: 466 NFLNAM 449
             LNA+
Sbjct: 95  KLLNAV 100


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 31.1 bits (67), Expect = 0.023
 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = -3

Query: 637 IXYCIY--AIXKXTVFINLHTCIYNSKYTINV-KITTLIQYFAAPLLTPLPYKMFIRKKK 467
           + YCI   AI   T    L  C    KY+  + KITT++Q + + LL  L Y   I  +K
Sbjct: 33  LVYCIIFGAIATLTCIEGLRDC--PRKYSTPLAKITTILQRYCSVLLVFLTYFFNILFRK 90

Query: 466 NFLNAM 449
             LNA+
Sbjct: 91  KLLNAV 96


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
 Frame = +1

Query: 61  GNSARGDESRRRWLPSSASTQLPAGPGRRPTEPSEWPGGRSTRGASR--YNIKPTTAAKA 234
           G+   GDE      P+SA++  P         P + P   S R  S    N +    ++ 
Sbjct: 25  GDKLEGDEDTGSMTPNSAASPAPPEEEAASPTPGDVPTPSSPRSISEDPLNCRDLPNSRC 84

Query: 235 EEKQASN 255
             +++S+
Sbjct: 85  NSRESSD 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,076
Number of Sequences: 336
Number of extensions: 3020
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46091250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)