Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_G06_e431_14.seq
         (1533 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ224676-1|CAA12058.1|  687|Drosophila melanogaster rho type GEF...    38   0.037
AY071298-1|AAL48920.1|  687|Drosophila melanogaster RE32772p pro...    36   0.15 
AE014134-3232|AAF53887.2|  687|Drosophila melanogaster CG10043-P...    36   0.15 
AE014134-3231|AAF53886.1|  687|Drosophila melanogaster CG10043-P...    36   0.15 

>AJ224676-1|CAA12058.1|  687|Drosophila melanogaster rho type GEF
           protein.
          Length = 687

 Score = 37.9 bits (84), Expect = 0.037
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = +1

Query: 64  NSARGDESRRRWLPSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEK 243
           NS+ G  +     P S+   LPAG GR P  PS  P G S+ G+  +   P T + +  K
Sbjct: 390 NSSLGHLNAAHMSPPSSHILLPAG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHK 448

Query: 244 QASN 255
           ++ +
Sbjct: 449 RSQS 452


>AY071298-1|AAL48920.1|  687|Drosophila melanogaster RE32772p
           protein.
          Length = 687

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +1

Query: 64  NSARGDESRRRWLPSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEK 243
           NS+ G  +     P S+   LP G GR P  PS  P G S+ G+  +   P T + +  K
Sbjct: 390 NSSLGHLNAAHMSPPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHK 448

Query: 244 QASN 255
           ++ +
Sbjct: 449 RSQS 452


>AE014134-3232|AAF53887.2|  687|Drosophila melanogaster CG10043-PB,
           isoform B protein.
          Length = 687

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +1

Query: 64  NSARGDESRRRWLPSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEK 243
           NS+ G  +     P S+   LP G GR P  PS  P G S+ G+  +   P T + +  K
Sbjct: 390 NSSLGHLNAAHMSPPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHK 448

Query: 244 QASN 255
           ++ +
Sbjct: 449 RSQS 452


>AE014134-3231|AAF53886.1|  687|Drosophila melanogaster CG10043-PA,
           isoform A protein.
          Length = 687

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +1

Query: 64  NSARGDESRRRWLPSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEK 243
           NS+ G  +     P S+   LP G GR P  PS  P G S+ G+  +   P T + +  K
Sbjct: 390 NSSLGHLNAAHMSPPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHK 448

Query: 244 QASN 255
           ++ +
Sbjct: 449 RSQS 452


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,615,909
Number of Sequences: 53049
Number of extensions: 565060
Number of successful extensions: 1634
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8575063632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)