Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_G03_e407_13.seq
(1562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 226 4e-59
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 226 4e-59
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 226 4e-59
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 75 1e-13
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 46 7e-05
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 46 7e-05
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 31 2.2
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 5.1
Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical p... 29 6.8
Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical pr... 29 6.8
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 6.8
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 8.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 8.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 8.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 29 8.9
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 29 8.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 8.9
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 8.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 8.9
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 226 bits (552), Expect = 4e-59
Identities = 104/137 (75%), Positives = 117/137 (85%)
Frame = +3
Query: 72 GTRVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 251
G VGFNVKNVSVK++RRG V DSK +P + A F AQVI++NHPGQISNGYTPVLDCH
Sbjct: 271 GDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCH 330
Query: 252 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 431
TAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVESF ++ PLGRF
Sbjct: 331 TAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRF 390
Query: 432 AVRDMRQTVAVGVIKAV 482
AVRDMRQTVAVGVIK+V
Sbjct: 391 AVRDMRQTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 226 bits (552), Expect = 4e-59
Identities = 104/137 (75%), Positives = 117/137 (85%)
Frame = +3
Query: 72 GTRVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 251
G VGFNVKNVSVK++RRG V DSK +P + A F AQVI++NHPGQISNGYTPVLDCH
Sbjct: 305 GDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCH 364
Query: 252 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 431
TAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVESF ++ PLGRF
Sbjct: 365 TAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRF 424
Query: 432 AVRDMRQTVAVGVIKAV 482
AVRDMRQTVAVGVIK+V
Sbjct: 425 AVRDMRQTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 226 bits (552), Expect = 4e-59
Identities = 104/137 (75%), Positives = 117/137 (85%)
Frame = +3
Query: 72 GTRVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 251
G VGFNVKNVSVK++RRG V DSK +P + A F AQVI++NHPGQISNGYTPVLDCH
Sbjct: 305 GDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCH 364
Query: 252 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 431
TAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVESF ++ PLGRF
Sbjct: 365 TAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRF 424
Query: 432 AVRDMRQTVAVGVIKAV 482
AVRDMRQTVAVGVIK+V
Sbjct: 425 AVRDMRQTVAVGVIKSV 441
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 74.9 bits (176), Expect = 1e-13
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Frame = +3
Query: 72 GTRVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 251
G + F +K + EL+ G++ + G F A+V+VL H I++GY+ VL
Sbjct: 397 GDNIKFKLKGIEENELQGGFIICSPDSLAKTGRV-FDAEVLVLEHRSIIASGYSCVLHIQ 455
Query: 252 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 431
+A + +D++TG+ + K +K + I+ L +P +E F+E+P LGRF
Sbjct: 456 SAVEEVTVKGVIATIDKKTGE--KKRAKFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRF 513
Query: 432 AVRDMRQTVAVG-VIKAV 482
+RD +T+A+G V+K V
Sbjct: 514 TLRDEGKTIAIGKVLKVV 531
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 46.0 bits (104), Expect = 7e-05
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +3
Query: 177 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 356
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 487 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 546
Query: 357 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 482
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 547 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 46.0 bits (104), Expect = 7e-05
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +3
Query: 177 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 356
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 505 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 564
Query: 357 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 482
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 565 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 494 SRWWQSHQSCRKSHQGQEVASTVNSSVLYTTAILHSPKGVQKERRATN 637
SR+ H S S G EV S +SS+ +T L+S K ++ RRA N
Sbjct: 3717 SRFLNMHNSGSDSDSGSEVRSDSSSSLGGSTESLNSSKKGKRARRAMN 3764
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 5.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 242 GLPHSPHSLQICRNQRESRPSYW*INR 322
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical
protein C25F9.13 protein.
Length = 224
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 301 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 420
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFLNLKLSIVPSTKWRPPSSCTMYPANSTFP 188
>Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical
protein C25F9.1 protein.
Length = 431
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 301 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 420
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFFNLKLEIVPSTKWRPPSSCTMYPANSTFP 188
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 274 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWS 399
LPK+ T V + TT+ P +PP +T PP +S
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPPITTTYS 305
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 476 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 649
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 493 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 551
Query: 650 Y 652
Y
Sbjct: 552 Y 552
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 476 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 649
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 707 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 765
Query: 650 Y 652
Y
Sbjct: 766 Y 766
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 476 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 649
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 843 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 901
Query: 650 Y 652
Y
Sbjct: 902 Y 902
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 476 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 649
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 892 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 950
Query: 650 Y 652
Y
Sbjct: 951 Y 951
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 476 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 649
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 892 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 950
Query: 650 Y 652
Y
Sbjct: 951 Y 951
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 476 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 649
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 884 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 942
Query: 650 Y 652
Y
Sbjct: 943 Y 943
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 476 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 649
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 895 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 953
Query: 650 Y 652
Y
Sbjct: 954 Y 954
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 29.1 bits (62), Expect = 8.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 476 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 649
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 896 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 954
Query: 650 Y 652
Y
Sbjct: 955 Y 955
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,821,783
Number of Sequences: 27780
Number of extensions: 489550
Number of successful extensions: 1348
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4514820630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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