Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_G03_e407_13.seq
(1562 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 271 9e-75
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 270 3e-74
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 203 4e-54
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 55 2e-09
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 27 0.33
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 4.1
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 5.4
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 9.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 271 bits (665), Expect = 9e-75
Identities = 126/139 (90%), Positives = 132/139 (94%)
Frame = +3
Query: 72 GTRVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 251
G VGFNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVLNHPGQISNGYTPVLDCH
Sbjct: 305 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCH 364
Query: 252 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 431
TAHIACKFA+IKEK DRR GK+TE+NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRF
Sbjct: 365 TAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRF 424
Query: 432 AVRDMRQTVAVGVIKAVNF 488
AVRDMRQTVAVGVIKAV F
Sbjct: 425 AVRDMRQTVAVGVIKAVTF 443
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 270 bits (661), Expect = 3e-74
Identities = 125/139 (89%), Positives = 132/139 (94%)
Frame = +3
Query: 72 GTRVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 251
G VGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPVLDCH
Sbjct: 305 GDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 364
Query: 252 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 431
TAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRF
Sbjct: 365 TAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRF 424
Query: 432 AVRDMRQTVAVGVIKAVNF 488
AVRDMRQTVAVGVIK+V F
Sbjct: 425 AVRDMRQTVAVGVIKSVTF 443
Score = 22.6 bits (46), Expect = 9.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 706 HTPQMFCYNCKLKCKFIE 759
+TP + C+ + CKF E
Sbjct: 357 YTPVLDCHTAHIACKFAE 374
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 203 bits (495), Expect = 4e-54
Identities = 94/104 (90%), Positives = 98/104 (94%)
Frame = +3
Query: 72 GTRVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 251
G VGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPVLDCH
Sbjct: 16 GDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 75
Query: 252 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 383
TAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+K
Sbjct: 76 TAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
Score = 22.6 bits (46), Expect = 9.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 706 HTPQMFCYNCKLKCKFIE 759
+TP + C+ + CKF E
Sbjct: 68 YTPVLDCHTAHIACKFAE 85
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 54.8 bits (126), Expect = 2e-09
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +3
Query: 72 GTRVGFNVKNVSVKELRRGYVAGDSKN 152
G VGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 248 GDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 27.5 bits (58), Expect = 0.33
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 458 RRRCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVN 565
R RC+ ++ GS+ WQ +SC + E ++V+
Sbjct: 54 RGRCSSYLQVSGSKIWQMERSCMCCQESGEREASVS 89
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 4.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 149 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 259
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 23.4 bits (48), Expect = 5.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 78 RVGFNVKNVSVKELRRGYVAGDSK 149
R+G +++ S+ E GYV G++K
Sbjct: 227 RIGLRIQSDSLAENVEGYVHGETK 250
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.6 bits (46), Expect = 9.4
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 482 HSLYYTDGDRLPHVTHGETTEGWEFLEG-LHTQGLGGNQVDNG 357
H LYY D ++ + + E +E + L+TQ G NG
Sbjct: 276 HGLYYVDTEQFSNPQYEENNVQYEGSQDILNTQSFGKVVSKNG 318
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,227
Number of Sequences: 438
Number of extensions: 5847
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 54907875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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