Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_G02_e399_14.seq
         (1549 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    31   0.089
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    29   0.36 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    29   0.48 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   5.9  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 31.1 bits (67), Expect = 0.089
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
 Frame = +1

Query: 160 VAVGLHQESAVRPYYFLLIMDAITSDIREEAPWCIMFADDIVL--VGESGQEVQNRLDE- 330
           V  G+ Q S + P  + L+ + +      +    I FADDIVL  VG    +++N ++  
Sbjct: 606 VTAGVPQGSVLGPTLWNLMYNEVLGLTLYDGASLIGFADDIVLVAVGSRIDDLENTIETS 665

Query: 331 ---WRQRLENLGLIVCRTKTEYLV 393
               RQ +E++ L +  +KTEY++
Sbjct: 666 INIIRQWMESVELQLNISKTEYIL 689


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 29.1 bits (62), Expect = 0.36
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 357 PNSLQNKNRILGLRLLRYLQTEANITRRNQVPVCSE 464
           PN L N NRI G  LL   +   +  R N+  VC E
Sbjct: 329 PNELTNINRIKGKMLLLQRRFSEDFKRINETRVCGE 364


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 0.48
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
 Frame = +1

Query: 148 ASFDVAVGLHQESAVRPYYFLLIMDAITSDIREEAPWCIMFADDIVLV--GESGQEVQ-- 315
           A   V  G+ Q S + P  + L+ D +      E    I +ADDIVL+  G    +++  
Sbjct: 597 AEIAVTSGVPQGSVLGPTLWNLMYDGVLRVAMVEGARIIGYADDIVLLVEGNCVDDIEIL 656

Query: 316 -----NRLDEWRQRLENLGLIVCRTKTEYLV 393
                  +D W   + + GL +  TKTE+++
Sbjct: 657 VSSQIRIIDRW---MTDNGLKIAPTKTEFIM 684


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = +2

Query: 233 RIYGKKHP--GA*CSPMTSCWSVRVDKRC 313
           RI G   P  GA C+P   CW +   +RC
Sbjct: 186 RILGLAGPLHGAGCTPERLCWELHYLERC 214


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 984,013
Number of Sequences: 2352
Number of extensions: 19982
Number of successful extensions: 54
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 182064960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)