Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_G02_e399_14.seq
         (1549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    31   4.3  
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    31   4.3  
AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-P...    30   7.4  

>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 597 LKLKGRIYKSIIRPVILYGSECWAS 671
           L+ K  +Y S+++P+  YGSE W +
Sbjct: 779 LEFKALLYNSVLKPIWTYGSELWGN 803


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 597 LKLKGRIYKSIIRPVILYGSECWAS 671
           L+ K  +Y S+++P+  YGSE W +
Sbjct: 779 LEFKALLYNSVLKPIWTYGSELWGN 803


>AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-PA
            protein.
          Length = 1519

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 19/71 (26%), Positives = 28/71 (39%)
 Frame = -3

Query: 449  YLVPPSDIGFSLEIPQKSQTKYSVFVLQTIRPKFSSLCRHSSSLFCTSCPLSPTSTMSSA 270
            Y    S +G  ++IP K Q     F +QTI   F  +  H  S F      +   T+   
Sbjct: 1398 YRTLSSPVGGVVDIPNKYQYCVKGFFVQTISSSFEFMSFHPLSQFVGITEENEVRTLPQP 1457

Query: 269  NIMHQGASSRI 237
              +H    SR+
Sbjct: 1458 QYIHSNEFSRV 1468


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,578,981
Number of Sequences: 53049
Number of extensions: 923687
Number of successful extensions: 2277
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2276
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8676663912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)