Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_F11_e470_11.seq
         (1498 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7E6F Cluster: PREDICTED: hypothetical protein;...    87   1e-15
UniRef50_Q24IL9 Cluster: ABC transporter family protein; n=1; Te...    36   2.1  
UniRef50_Q4SEM9 Cluster: Chromosome undetermined SCAF14615, whol...    35   4.8  
UniRef50_Q6ZRT7 Cluster: CDNA FLJ46115 fis, clone TESTI2037085; ...    35   4.8  
UniRef50_A3JTE7 Cluster: Probable tpr domain protein; n=1; Rhodo...    35   6.3  
UniRef50_Q8N9V7 Cluster: CDNA FLJ36157 fis, clone TESTI2025656; ...    35   6.3  
UniRef50_Q8TF01 Cluster: Splicing factor, arginine/serine-rich 1...    34   8.4  

>UniRef50_UPI0000DB7E6F Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 218

 Score = 86.6 bits (205), Expect = 1e-15
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 22/104 (21%)
 Frame = +3

Query: 351 SERAIPHLRDIFGLNQQYD-------------------GKTFDENDD--NARKTR-KKKD 464
           ++R IPHLRDIFG   +++                   G T  E +   N++K + +++D
Sbjct: 7   ADRNIPHLRDIFGFGNKWENTRLQVEEKAPGHDSAVSIGSTSGEEESPKNSKKKKSRRRD 66

Query: 465 EYRTYANGDVKTLERHLSMKKTIRKKIMRDLQQAFVEDPNEFKV 596
             +T    DVK LERHLSMKKTIRKKIMRDLQQAFVEDPNEF+V
Sbjct: 67  NSKTLTETDVKHLERHLSMKKTIRKKIMRDLQQAFVEDPNEFRV 110


>UniRef50_Q24IL9 Cluster: ABC transporter family protein; n=1;
            Tetrahymena thermophila SB210|Rep: ABC transporter family
            protein - Tetrahymena thermophila SB210
          Length = 1940

 Score = 36.3 bits (80), Expect = 2.1
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
 Frame = +3

Query: 393  NQQYDGKTFDENDDNARKTRKKKDEYRTYANG--DVKTLERHLSMKKTIRKKIMRDLQQA 566
            NQQ   K       + +  +K K + +  A+   D++  +  +S K+  RKK+    Q+ 
Sbjct: 1648 NQQSQNKQEANQPRDPQNLKKDKKKVKNQASDEEDIEMQKLVISKKEKSRKKVKASQQEE 1707

Query: 567  FVEDPNEFKVXIRALRNSKRN*APKLLKSKRTYARTTRRSWT-YYAER 707
              +D NE K   +   +SK     K       Y   + +S+T YY +R
Sbjct: 1708 ITQDTNEKKKISQKKSSSKNKKIEKERSDPEDYHMESEQSFTDYYNDR 1755


>UniRef50_Q4SEM9 Cluster: Chromosome undetermined SCAF14615, whole
            genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
            Chromosome undetermined SCAF14615, whole genome shotgun
            sequence - Tetraodon nigroviridis (Green puffer)
          Length = 1558

 Score = 35.1 bits (77), Expect = 4.8
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +3

Query: 474  TYANGDVKTLERHLSMKKTIRKKIMRDLQQAFVEDPNEFKVXIRALRNSKRN-*APKLLK 650
            TY +GD + L  HL      +KK+ + L  +  E+  E +  +  LR  K+   AP+ L 
Sbjct: 1153 TYLSGDREKLRNHLMFVGEQKKKLKKQL-SSLSEEKEELQKDLETLRQEKQQLSAPRELP 1211

Query: 651  SKRTYARTTRRSWTYYAERRGARKC 725
            + R   R         AE R +R+C
Sbjct: 1212 NSRGGQREAELQQALQAEER-SRRC 1235


>UniRef50_Q6ZRT7 Cluster: CDNA FLJ46115 fis, clone TESTI2037085;
           n=6; Fungi/Metazoa group|Rep: CDNA FLJ46115 fis, clone
           TESTI2037085 - Homo sapiens (Human)
          Length = 148

 Score = 35.1 bits (77), Expect = 4.8
 Identities = 27/112 (24%), Positives = 47/112 (41%)
 Frame = +3

Query: 441 RKTRKKKDEYRTYANGDVKTLERHLSMKKTIRKKIMRDLQQAFVEDPNEFKVXIRALRNS 620
           +K +KKK + +       K  ++    KK  +KK  +  ++   ++  + K   +  +  
Sbjct: 21  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKK 80

Query: 621 KRN*APKLLKSKRTYARTTRRSWTYYAERRGARKCGRNNRQRRKLASGDVLL 776
           KR    K  K +R   R  RR       RR  R+  R  R+RR+   G + L
Sbjct: 81  KRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKEGKLTL 132


>UniRef50_A3JTE7 Cluster: Probable tpr domain protein; n=1;
           Rhodobacterales bacterium HTCC2150|Rep: Probable tpr
           domain protein - Rhodobacterales bacterium HTCC2150
          Length = 556

 Score = 34.7 bits (76), Expect = 6.3
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 303 AVISY*TGSALSFKMTSERAIPHLRDIFGLNQQYDGKTFDENDDNARKTR 452
           A + Y  G A   +   E AI H  D  G+N++  G   DE+D  A + R
Sbjct: 293 ASVKYAAGKAFDDQKDFETAIAHFNDANGINKEIHGFKLDEHDARAERLR 342


>UniRef50_Q8N9V7 Cluster: CDNA FLJ36157 fis, clone TESTI2025656;
           n=13; Eutheria|Rep: CDNA FLJ36157 fis, clone
           TESTI2025656 - Homo sapiens (Human)
          Length = 696

 Score = 34.7 bits (76), Expect = 6.3
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +3

Query: 513 LSMKKTIRKKIMRDLQQAFVEDPNEFKVXIRALRNSKRN*APKL-LKSKRTYARTTRRSW 689
           L  +    K+  + ++    + PNE+ +  R+ R   R+ + +L L  +RT   T +R+W
Sbjct: 435 LGYESMASKEDFKSMKSFIGKSPNEYHIERRSSREDLRSASEELKLSCQRTIPMTGKRTW 494

Query: 690 TYYAERRGARKC 725
            YY+  R +  C
Sbjct: 495 PYYSCARISAWC 506


>UniRef50_Q8TF01 Cluster: Splicing factor, arginine/serine-rich 18;
           n=60; Euteleostomi|Rep: Splicing factor,
           arginine/serine-rich 18 - Homo sapiens (Human)
          Length = 805

 Score = 34.3 bits (75), Expect = 8.4
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = +3

Query: 495 KTLERHL-SMKKTI--RKKIMRDLQQAFVEDPNEFKVXIRALRNSKRN*APKLLKSKRTY 665
           K  +RH  S   TI  R+   R   +    + N  +V IR  R S RN   +  +  R+ 
Sbjct: 553 KRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSP 612

Query: 666 ARTTRRSWTYYAERRGARKCGRNNRQRRKL 755
           +R  RRS +   +RR  R     +R RRK+
Sbjct: 613 SRERRRSRSRSRDRRTNRASRSRSRDRRKI 642


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 930,546,910
Number of Sequences: 1657284
Number of extensions: 14901649
Number of successful extensions: 38300
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37830
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 158892113150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)