Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_F11_e470_11.seq
(1498 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens ... 35 0.67
AK093476-1|BAC04180.1| 696|Homo sapiens protein ( Homo sapiens ... 35 0.88
AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein. 34 1.2
AL080186-1|CAB45767.1| 299|Homo sapiens hypothetical protein pr... 34 1.2
AF314185-1|AAL76164.1| 283|Homo sapiens SR rich protein protein. 34 1.2
AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein. 34 1.2
>AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ46115 fis, clone TESTI2037085. ).
Length = 148
Score = 35.1 bits (77), Expect = 0.67
Identities = 27/112 (24%), Positives = 47/112 (41%)
Frame = +3
Query: 441 RKTRKKKDEYRTYANGDVKTLERHLSMKKTIRKKIMRDLQQAFVEDPNEFKVXIRALRNS 620
+K +KKK + + K ++ KK +KK + ++ ++ + K + +
Sbjct: 21 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKK 80
Query: 621 KRN*APKLLKSKRTYARTTRRSWTYYAERRGARKCGRNNRQRRKLASGDVLL 776
KR K K +R R RR RR R+ R R+RR+ G + L
Sbjct: 81 KRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKEGKLTL 132
Score = 33.1 bits (72), Expect = 2.7
Identities = 25/104 (24%), Positives = 44/104 (42%)
Frame = +3
Query: 441 RKTRKKKDEYRTYANGDVKTLERHLSMKKTIRKKIMRDLQQAFVEDPNEFKVXIRALRNS 620
+K +KKK + + K ++ KK +KK + ++ + N+ K + +
Sbjct: 19 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKK 78
Query: 621 KRN*APKLLKSKRTYARTTRRSWTYYAERRGARKCGRNNRQRRK 752
K+ K K K+ R RR RR R+ R R+RR+
Sbjct: 79 KKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRR 122
Score = 31.5 bits (68), Expect = 8.2
Identities = 25/104 (24%), Positives = 43/104 (41%)
Frame = +3
Query: 441 RKTRKKKDEYRTYANGDVKTLERHLSMKKTIRKKIMRDLQQAFVEDPNEFKVXIRALRNS 620
+K +KKK + + K ++ KK +KK + ++ + + K + +
Sbjct: 20 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKK 79
Query: 621 KRN*APKLLKSKRTYARTTRRSWTYYAERRGARKCGRNNRQRRK 752
K+ K K KR R RR RR R+ R R+RR+
Sbjct: 80 KKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 123
>AK093476-1|BAC04180.1| 696|Homo sapiens protein ( Homo sapiens
cDNA FLJ36157 fis, clone TESTI2025656. ).
Length = 696
Score = 34.7 bits (76), Expect = 0.88
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 513 LSMKKTIRKKIMRDLQQAFVEDPNEFKVXIRALRNSKRN*APKL-LKSKRTYARTTRRSW 689
L + K+ + ++ + PNE+ + R+ R R+ + +L L +RT T +R+W
Sbjct: 435 LGYESMASKEDFKSMKSFIGKSPNEYHIERRSSREDLRSASEELKLSCQRTIPMTGKRTW 494
Query: 690 TYYAERRGARKC 725
YY+ R + C
Sbjct: 495 PYYSCARISAWC 506
>AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein.
Length = 805
Score = 34.3 bits (75), Expect = 1.2
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +3
Query: 495 KTLERHL-SMKKTI--RKKIMRDLQQAFVEDPNEFKVXIRALRNSKRN*APKLLKSKRTY 665
K +RH S TI R+ R + + N +V IR R S RN + + R+
Sbjct: 553 KRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSP 612
Query: 666 ARTTRRSWTYYAERRGARKCGRNNRQRRKL 755
+R RRS + +RR R +R RRK+
Sbjct: 613 SRERRRSRSRSRDRRTNRASRSRSRDRRKI 642
>AL080186-1|CAB45767.1| 299|Homo sapiens hypothetical protein
protein.
Length = 299
Score = 34.3 bits (75), Expect = 1.2
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +3
Query: 495 KTLERHL-SMKKTI--RKKIMRDLQQAFVEDPNEFKVXIRALRNSKRN*APKLLKSKRTY 665
K +RH S TI R+ R + + N +V IR R S RN + + R+
Sbjct: 47 KRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSP 106
Query: 666 ARTTRRSWTYYAERRGARKCGRNNRQRRKL 755
+R RRS + +RR R +R RRK+
Sbjct: 107 SRERRRSRSRSRDRRTNRASRSRSRDRRKI 136
>AF314185-1|AAL76164.1| 283|Homo sapiens SR rich protein protein.
Length = 283
Score = 34.3 bits (75), Expect = 1.2
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +3
Query: 495 KTLERHL-SMKKTI--RKKIMRDLQQAFVEDPNEFKVXIRALRNSKRN*APKLLKSKRTY 665
K +RH S TI R+ R + + N +V IR R S RN + + R+
Sbjct: 31 KRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSP 90
Query: 666 ARTTRRSWTYYAERRGARKCGRNNRQRRKL 755
+R RRS + +RR R +R RRK+
Sbjct: 91 SRERRRSRSRSRDRRTNRASRSRSRDRRKI 120
>AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein.
Length = 805
Score = 34.3 bits (75), Expect = 1.2
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +3
Query: 495 KTLERHL-SMKKTI--RKKIMRDLQQAFVEDPNEFKVXIRALRNSKRN*APKLLKSKRTY 665
K +RH S TI R+ R + + N +V IR R S RN + + R+
Sbjct: 553 KRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSP 612
Query: 666 ARTTRRSWTYYAERRGARKCGRNNRQRRKL 755
+R RRS + +RR R +R RRK+
Sbjct: 613 SRERRRSRSRSRDRRTNRASRSRSRDRRKI 642
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,735,713
Number of Sequences: 237096
Number of extensions: 2420368
Number of successful extensions: 5075
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5046
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22197699270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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