Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_F10_e462_12.seq
(1188 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 44 2e-06
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 40 5e-05
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 37 3e-04
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 34 0.002
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 33 0.003
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 25 1.1
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 24 2.6
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 7.8
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 7.8
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 44.0 bits (99), Expect = 2e-06
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 1/128 (0%)
Frame = +1
Query: 202 CGNVFRRRSRMETCLKSHNMYDDTASYPCMTCPRHFKSKEDLALH-RRRVHRKRFPCKFC 378
CG + R S ++T L++H+ Y C+ C + F +L H R K F C C
Sbjct: 255 CGKSYARPSTLKTHLRTHS---GEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVC 311
Query: 379 PTDYNTRKELFKHLQIHQKVQLMEYKVISEVVKGRQKLKCFMCSKTYSELSELKXPRNGR 558
++ + H++ H G + +C +C K +S+ S L
Sbjct: 312 DRRFSQSSSVTTHMRTHS---------------GERPYRCRLCKKAFSDSSTLTKHLRIH 356
Query: 559 PQGSPYSC 582
PY C
Sbjct: 357 SGEKPYEC 364
Score = 39.5 bits (88), Expect = 5e-05
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 190 YECT-CGNVFRRRSRMETCLKSHNMYDDTASYPCMTCPRHFKSKEDLALHRRRVHRKR-F 363
Y C C F + + + +++H+ + C C R F + H R +R +
Sbjct: 278 YRCIDCNKSFSQAANLTAHVRTHS---GEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPY 334
Query: 364 PCKFCPTDYNTRKELFKHLQIHQKVQLMEYKV 459
C+ C ++ L KHL+IH + E K+
Sbjct: 335 RCRLCKKAFSDSSTLTKHLRIHSGEKPYECKL 366
Score = 39.1 bits (87), Expect = 6e-05
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 190 YEC-TCGNVFRRRSRMETCLKSHNMYDDTASYPCMTCPRHFKSKEDLALHRRRVH--RKR 360
+ C C F + S + T +++H+ Y C C + F L H R +H K
Sbjct: 306 FRCPVCDRRFSQSSSVTTHMRTHS---GERPYRCRLCKKAFSDSSTLTKHLR-IHSGEKP 361
Query: 361 FPCKFCPTDYNTRKELFKHLQIHQKVQLM 447
+ CK C ++ L +H+++H +M
Sbjct: 362 YECKLCLLRFSQSGNLNRHMRVHGAASMM 390
Score = 24.2 bits (50), Expect = 1.9
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +1
Query: 496 CFMCSKTYSELSELKXPRNGRPQGSPYSC 582
C +C K+Y+ S LK PY C
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPYRC 280
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 39.5 bits (88), Expect = 5e-05
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 190 YECT-CGNVFRRRSRMETCLKSHNMYDDTASYPCMTCPRHFKSKEDLALHRRRVHRKR-F 363
Y C C F + + + +++H+ + C C R F + H R +R +
Sbjct: 22 YRCIDCNKSFSQAANLTAHVRTHS---GEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPY 78
Query: 364 PCKFCPTDYNTRKELFKHLQIHQKVQLMEYKV 459
C+ C ++ L KHL+IH + E K+
Sbjct: 79 RCRLCKKAFSDSSTLTKHLRIHSGEKPYECKL 110
Score = 39.1 bits (87), Expect = 6e-05
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 190 YEC-TCGNVFRRRSRMETCLKSHNMYDDTASYPCMTCPRHFKSKEDLALHRRRVH--RKR 360
+ C C F + S + T +++H+ Y C C + F L H R +H K
Sbjct: 50 FRCPVCDRRFSQSSSVTTHMRTHS---GERPYRCRLCKKAFSDSSTLTKHLR-IHSGEKP 105
Query: 361 FPCKFCPTDYNTRKELFKHLQIHQKVQLM 447
+ CK C ++ L +H+++H +M
Sbjct: 106 YECKLCLLRFSQSGNLNRHMRVHGAASMM 134
Score = 38.7 bits (86), Expect = 8e-05
Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 1/124 (0%)
Frame = +1
Query: 214 FRRRSRMETCLKSHNMYDDTASYPCMTCPRHFKSKEDLALH-RRRVHRKRFPCKFCPTDY 390
+ R S ++T L++H+ Y C+ C + F +L H R K F C C +
Sbjct: 3 YARPSTLKTHLRTHS---GEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRF 59
Query: 391 NTRKELFKHLQIHQKVQLMEYKVISEVVKGRQKLKCFMCSKTYSELSELKXPRNGRPQGS 570
+ + H++ H G + +C +C K +S+ S L
Sbjct: 60 SQSSSVTTHMRTHS---------------GERPYRCRLCKKAFSDSSTLTKHLRIHSGEK 104
Query: 571 PYSC 582
PY C
Sbjct: 105 PYEC 108
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 36.7 bits (81), Expect = 3e-04
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +1
Query: 160 AKVEPLKKEGYECT---CGNVFRRRSRMETCLKSHNMYDDTASYPC--MTCPRHFKSKED 324
A V KK + C CG V+ + S ++ L+ H + C + C + F ++
Sbjct: 305 AGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHT---GERPFVCNWLFCGKRFTRSDE 361
Query: 325 LALH-RRRVHRKRFPCKFCPTDYNTRKELFKHLQIH 429
L H R KRF C C + L KH++ H
Sbjct: 362 LQRHLRTHTGEKRFACPICNKRFMRSDHLAKHVKTH 397
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 34.3 bits (75), Expect = 0.002
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 286 CMTCPRHFKSKEDLALH-RRRVHRKRFPCKFCPTDYNTRKELFKHLQIHQ 432
C+ C R K L +H R + F CK C + T+ L H+ +H+
Sbjct: 137 CVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHR 186
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 33.5 bits (73), Expect = 0.003
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 14/115 (12%)
Frame = +1
Query: 280 YPCMTCPRHFKSKEDLALHRR-RVHRKRFPCKFCPTDYNTRKELFKHLQIH--------- 429
+ C C R F K L H R K F C+ C + L H+++H
Sbjct: 135 FTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCE 194
Query: 430 ----QKVQLMEYKVISEVVKGRQKLKCFMCSKTYSELSELKXPRNGRPQGSPYSC 582
Q VQ+ + V G + C CS +S+ ++LK P+ C
Sbjct: 195 HCDRQFVQVANLRRHLRVHTGERPYGCEHCSMKFSDSNQLKAHVLIHTNEKPFEC 249
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 25.0 bits (52), Expect = 1.1
Identities = 15/63 (23%), Positives = 24/63 (38%)
Frame = -1
Query: 264 VHVMRLQTCFHATSSPKNITTSTLIAFLF*RFHFSLNFFVLFRNKLFRAILLPCLLTFYK 85
VH++ L +H + T L F F+ L F + + LPC+ FY
Sbjct: 158 VHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYS 217
Query: 84 TLV 76
+
Sbjct: 218 AFI 220
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 23.8 bits (49), Expect = 2.6
Identities = 9/46 (19%), Positives = 23/46 (50%)
Frame = +1
Query: 445 MEYKVISEVVKGRQKLKCFMCSKTYSELSELKXPRNGRPQGSPYSC 582
++ K+++ +K +++ C C++ +++ L PYSC
Sbjct: 65 LQPKLVAGKLKPKRQFICKYCNRQFTKSYNLLIHERTHTDERPYSC 110
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 22.2 bits (45), Expect = 7.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 355 KRFPCKFCPTDYNTRKELFKHLQIH 429
K F CK C T+ E + H ++H
Sbjct: 200 KTFKCKQCDFVAITKLEQWNHSKVH 224
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.2 bits (45), Expect = 7.8
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +1
Query: 367 CKFCPTDYNTRKELFKHL--QIHQKVQLM 447
CK C +++ KEL H+ H K +M
Sbjct: 550 CKVCDQAFSSLKELSNHMVKNSHYKEHIM 578
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,892
Number of Sequences: 336
Number of extensions: 4565
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34527696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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