Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_F09_e454_11.seq
         (1563 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0184 + 13947739-13947930,13948289-13948465,13948546-139486...    31   2.5  

>08_02_0184 +
           13947739-13947930,13948289-13948465,13948546-13948665,
           13948709-13948753,13948848-13949012,13949324-13949402,
           13949552-13949631,13950548-13950616,13950948-13951031
          Length = 336

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 23/86 (26%), Positives = 41/86 (47%)
 Frame = -3

Query: 370 IEILIYINRVSGLGVTAASRLHRARDMRNYINLNCYKITIIHNMLLISTPESYAGYIVIA 191
           ++I  ++     LG+TA   +H  R+M   +N++  ++  I+N        S   ++V  
Sbjct: 214 LDIKYFLRICKELGMTALIEVHDEREMERVLNISGVQLIGINN-------RSLETFVVDT 266

Query: 190 TGRRLSLCAHCD*AEIDKILVV*ESG 113
           +  ++ L  H D      ILVV ESG
Sbjct: 267 SNTKMLLDMHGDTIREKGILVVGESG 292


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,487,385
Number of Sequences: 37544
Number of extensions: 533601
Number of successful extensions: 740
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5046916980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)