Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_F08_e446_12.seq
         (1590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       27   1.1  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    26   3.4  

>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = +3

Query: 393 IEQIFQLTNAAALTDCVNFLKPEVLSTPAQVLDKKDATLSEIYYSVYALKALGKGSVFDK 572
           ++Q  Q  + A +T+ +  L     +    +   K    S +   V ALK LG  S+FD+
Sbjct: 339 LQQSAQQLSVADVTEIITSLNQNRGTNKMHLTVPKFNVFSSLSL-VPALKHLGLRSIFDR 397

Query: 573 EDALKNL 593
             AL+NL
Sbjct: 398 ASALQNL 404


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 478 AGVERTSGFKKL-TQSVKAAALVSWKICSMFFTSYLI 371
           +G+ +  G+  L  QS+ A  L  W +CS F   +LI
Sbjct: 386 SGLFKGGGWYMLGVQSLSALCLACWGVCSTFVLLWLI 422


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,212,890
Number of Sequences: 2352
Number of extensions: 22020
Number of successful extensions: 44
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 68
effective length of database: 404,043
effective search space used: 186263823
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)