BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_F08_e446_12.seq
(1590 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069461-1|AAL39606.1| 634|Drosophila melanogaster LD18774p pro... 75 4e-13
AE013599-2557|AAF57793.1| 634|Drosophila melanogaster CG6370-PA... 75 4e-13
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 34 0.62
>AY069461-1|AAL39606.1| 634|Drosophila melanogaster LD18774p
protein.
Length = 634
Score = 74.5 bits (175), Expect = 4e-13
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 5/179 (2%)
Frame = +3
Query: 231 GTIELKRLQSILEDSLKSKDISSLYYAVKGLKLLKAPIPD-ICEDIKTIKYDVK--NIEQ 401
G +L RLQ + D S D+ S++++ ++L A + +C+ I T+ + K + E+
Sbjct: 29 GQKDLSRLQKVFVDGFGSSDLQSIFFSSLNIQLTDATQKEPLCKKIATLHSESKLNSFEK 88
Query: 402 IFQLTNAAALTDCVNFLKPEVLSTPAQVLDKKDATLSEIYYSVYALKALG-KGSVFDKED 578
+ A+ C + +LS L+ + + EI+Y V K LG + + +E
Sbjct: 89 DYYYIGASRNLGCSAKIDEGLLSKVYSSLNSELGSSQEIFYRVVTHKVLGVEINEATQEK 148
Query: 579 ALKNLIQLLKKDDSPVNYGYVFALCEHMGC-GTWTVTHAEGVLLAADETDSXSLHFEGG 752
+K L +LLKKDD+ GY F + +G ++ E ++ ADE D L FEGG
Sbjct: 149 LVKRLQELLKKDDTLSGLGYAFNVAPLLGASASFIANRVEDAIVQADEVDGKLLQFEGG 207
>AE013599-2557|AAF57793.1| 634|Drosophila melanogaster CG6370-PA
protein.
Length = 634
Score = 74.5 bits (175), Expect = 4e-13
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 5/179 (2%)
Frame = +3
Query: 231 GTIELKRLQSILEDSLKSKDISSLYYAVKGLKLLKAPIPD-ICEDIKTIKYDVK--NIEQ 401
G +L RLQ + D S D+ S++++ ++L A + +C+ I T+ + K + E+
Sbjct: 29 GQKDLSRLQKVFVDGFGSSDLQSIFFSSLNIQLTDATQKEPLCKKIATLHSESKLNSFEK 88
Query: 402 IFQLTNAAALTDCVNFLKPEVLSTPAQVLDKKDATLSEIYYSVYALKALG-KGSVFDKED 578
+ A+ C + +LS L+ + + EI+Y V K LG + + +E
Sbjct: 89 DYYYIGASRNLGCSAKIDEGLLSKVYSSLNSELGSSQEIFYRVVTHKVLGVEINEATQEK 148
Query: 579 ALKNLIQLLKKDDSPVNYGYVFALCEHMGC-GTWTVTHAEGVLLAADETDSXSLHFEGG 752
+K L +LLKKDD+ GY F + +G ++ E ++ ADE D L FEGG
Sbjct: 149 LVKRLQELLKKDDTLSGLGYAFNVAPLLGASASFIANRVEDAIVQADEVDGKLLQFEGG 207
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 33.9 bits (74), Expect = 0.62
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +2
Query: 1370 RPPIHGXXXAPTPPPTGXXXRGR-XXXXSXXXXPXXPPPRRPXXGXPPS 1513
RPP PTPPPT + + P PPPR P PP+
Sbjct: 196 RPPTRPPTRPPTPPPTYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPT 244
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,037,804
Number of Sequences: 53049
Number of extensions: 1055825
Number of successful extensions: 4028
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3449
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8961144696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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