Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_F07_e438_11.seq
         (1597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    24   2.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   8.3  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +1

Query: 571 ILYKSAPLMAGYLMDWFVER---ERKQYLKYIIKSYVLKFLINF*TFKLLL 714
           ILY S  ++  Y+ + F      ++KQY+  ++ +  + F+IN  T  L+L
Sbjct: 220 ILYSSL-MVLNYIDEVFNNNFGYDKKQYIGVVVANVGVAFMINVGTVTLIL 269


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -2

Query: 312 SNPCMGFIYFNCKTVTNTLHC 250
           SNPC      +C  + N  HC
Sbjct: 304 SNPCSNAGTLDCVQLVNDYHC 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,254
Number of Sequences: 336
Number of extensions: 5274
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 48242175
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)