Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_F07_e438_11.seq
         (1597 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB067519-1|BAB67825.1|  795|Homo sapiens KIAA1932 protein protein.    256   1e-67
BC028048-1|AAH28048.1|  800|Homo sapiens leukocyte receptor clus...   253   2e-66

>AB067519-1|BAB67825.1|  795|Homo sapiens KIAA1932 protein protein.
          Length = 795

 Score =  256 bits (628), Expect = 1e-67
 Identities = 131/220 (59%), Positives = 159/220 (72%), Gaps = 3/220 (1%)
 Frame = +1

Query: 25   AALXTSGXPPGLQXIR--HEA*HIEKSFLRLTKAPEACEVRPVMVLRNSLKNVKERWIER 198
            ++L +SG  P  Q ++       I K +LRLT AP+   VRPV VL+ SL  VK  W E+
Sbjct: 513  SSLESSGADPDWQELQIVGTCPDITKHYLRLTCAPDPSTVRPVAVLKKSLCMVKCHWKEK 572

Query: 199  QDYRYACDQLKSIRQDLTVQGIRDSFTVEVYETHARIALEKGDHEEFNQCQTQLKMLYSE 378
            QDY +AC+Q+KSIRQDLTVQGIR  FTVEVYETHARIALEKGDHEEFNQCQTQLK LY+E
Sbjct: 573  QDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQLKSLYAE 632

Query: 379  -LPDSRSNSAEFTAYRILYYIFTKNTLDLTTIFQFISNADRENECIKHALQTRCAWATGN 555
             LP    N  EFTAYRILYYIFTKN+ D+TT   +++   + + C+ HAL  R AWA GN
Sbjct: 633  NLP---GNVGEFTAYRILYYIFTKNSGDITTELAYLTRELKADPCVAHALALRTAWALGN 689

Query: 556  LHKFFILYKSAPLMAGYLMDWFVERERKQYLKYIIKSYVL 675
             H+FF LY  AP M+GYL+D F +RERK  LK +IK+YV+
Sbjct: 690  YHRFFRLYCHAPCMSGYLVDKFADRERKVALKAMIKTYVV 729


>BC028048-1|AAH28048.1|  800|Homo sapiens leukocyte receptor cluster
            (LRC) member 8 protein.
          Length = 800

 Score =  253 bits (619), Expect = 2e-66
 Identities = 129/218 (59%), Positives = 157/218 (72%), Gaps = 3/218 (1%)
 Frame = +1

Query: 25   AALXTSGXPPGLQXIR--HEA*HIEKSFLRLTKAPEACEVRPVMVLRNSLKNVKERWIER 198
            ++L +SG  P  Q ++       I K +LRLT AP+   VRPV VL+ SL  VK  W E+
Sbjct: 534  SSLESSGADPDWQELQIVGTCPDITKHYLRLTCAPDPSTVRPVAVLKKSLCMVKCHWKEK 593

Query: 199  QDYRYACDQLKSIRQDLTVQGIRDSFTVEVYETHARIALEKGDHEEFNQCQTQLKMLYSE 378
            QDY +AC+Q+KSIRQDLTVQGIR  FTVEVYETHARIALEKGDHEEFNQCQTQLK LY+E
Sbjct: 594  QDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQLKSLYAE 653

Query: 379  -LPDSRSNSAEFTAYRILYYIFTKNTLDLTTIFQFISNADRENECIKHALQTRCAWATGN 555
             LP    N  EFTAYRILYYIFTKN+ D+TT   +++   + + C+ HAL  R AWA GN
Sbjct: 654  NLP---GNVGEFTAYRILYYIFTKNSGDITTELAYLTRELKADPCVAHALALRTAWALGN 710

Query: 556  LHKFFILYKSAPLMAGYLMDWFVERERKQYLKYIIKSY 669
             H+FF LY  AP M+GYL+D F +RERK  LK +IK++
Sbjct: 711  YHRFFRLYCHAPCMSGYLVDKFADRERKVALKAMIKTF 748


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,379,846
Number of Sequences: 237096
Number of extensions: 3017380
Number of successful extensions: 4396
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4392
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23847980606
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)