Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_F07_e438_11.seq
(1597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical p... 213 3e-55
U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical p... 213 3e-55
Z82274-7|CAD21646.1| 331|Caenorhabditis elegans Hypothetical pr... 35 0.18
U67952-1|AAB07577.2| 414|Caenorhabditis elegans Hypothetical pr... 32 0.98
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 32 0.98
AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical ... 31 1.7
AF016439-3|AAB65899.2| 467|Caenorhabditis elegans Hypothetical ... 31 1.7
AL110479-18|CAB54365.1| 484|Caenorhabditis elegans Hypothetical... 29 9.2
>U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical
protein F01F1.1c protein.
Length = 641
Score = 213 bits (520), Expect = 3e-55
Identities = 106/203 (52%), Positives = 144/203 (70%)
Frame = +1
Query: 61 QXIRHEA*HIEKSFLRLTKAPEACEVRPVMVLRNSLKNVKERWIERQDYRYACDQLKSIR 240
Q IR +IEKSF RLT AP EVRP+ VLR SL+NV++++ R +Y Y Q++SIR
Sbjct: 393 QVIRGTCQNIEKSFFRLTAAPNPSEVRPLEVLRLSLQNVRDKYRARAEYSYLTSQMRSIR 452
Query: 241 QDLTVQGIRDSFTVEVYETHARIALEKGDHEEFNQCQTQLKMLYSELPDSRSNSAEFTAY 420
QDLTVQ IR+ FTVEVYE +ARI+LE D EEFN+CQ+QLK+LYSE+ ++ +N AEF AY
Sbjct: 453 QDLTVQVIRNEFTVEVYEINARISLENADREEFNKCQSQLKLLYSEI-ENCANQAEFVAY 511
Query: 421 RILYYIFTKNTLDLTTIFQFISNADRENECIKHALQTRCAWATGNLHKFFILYKSAPLMA 600
R+LYYI N +D+ + + ++ +EN+C++ AL R A N KFF L+K+AP M
Sbjct: 512 RLLYYIAMDNQIDINALLRELTPELKENDCVEFALNVRKAVTMNNYVKFFRLFKNAPRMC 571
Query: 601 GYLMDWFVERERKQYLKYIIKSY 669
Y+MD FV+RERK+ L I K++
Sbjct: 572 PYIMDLFVDRERKKALGIITKAF 594
>U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical
protein F01F1.1a protein.
Length = 646
Score = 213 bits (520), Expect = 3e-55
Identities = 106/203 (52%), Positives = 144/203 (70%)
Frame = +1
Query: 61 QXIRHEA*HIEKSFLRLTKAPEACEVRPVMVLRNSLKNVKERWIERQDYRYACDQLKSIR 240
Q IR +IEKSF RLT AP EVRP+ VLR SL+NV++++ R +Y Y Q++SIR
Sbjct: 398 QVIRGTCQNIEKSFFRLTAAPNPSEVRPLEVLRLSLQNVRDKYRARAEYSYLTSQMRSIR 457
Query: 241 QDLTVQGIRDSFTVEVYETHARIALEKGDHEEFNQCQTQLKMLYSELPDSRSNSAEFTAY 420
QDLTVQ IR+ FTVEVYE +ARI+LE D EEFN+CQ+QLK+LYSE+ ++ +N AEF AY
Sbjct: 458 QDLTVQVIRNEFTVEVYEINARISLENADREEFNKCQSQLKLLYSEI-ENCANQAEFVAY 516
Query: 421 RILYYIFTKNTLDLTTIFQFISNADRENECIKHALQTRCAWATGNLHKFFILYKSAPLMA 600
R+LYYI N +D+ + + ++ +EN+C++ AL R A N KFF L+K+AP M
Sbjct: 517 RLLYYIAMDNQIDINALLRELTPELKENDCVEFALNVRKAVTMNNYVKFFRLFKNAPRMC 576
Query: 601 GYLMDWFVERERKQYLKYIIKSY 669
Y+MD FV+RERK+ L I K++
Sbjct: 577 PYIMDLFVDRERKKALGIITKAF 599
>Z82274-7|CAD21646.1| 331|Caenorhabditis elegans Hypothetical
protein JC8.13 protein.
Length = 331
Score = 34.7 bits (76), Expect = 0.18
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 205 YRYACDQLKSIRQDLTVQGIRDSFTVEVYETHARIALEKGDHEEFNQCQT 354
+ + D+L+SIRQD+ +Q +R FTV + E +E + +CQ+
Sbjct: 102 FSFVSDRLRSIRQDMIMQNLRGDFTVILIEKMLPFYIETDGACKMAKCQS 151
>U67952-1|AAB07577.2| 414|Caenorhabditis elegans Hypothetical
protein F39B3.2 protein.
Length = 414
Score = 32.3 bits (70), Expect = 0.98
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +1
Query: 418 YRILYYIFTKNTLDLTTIFQFISNADRENECIKHALQTRCAWATGNLHKFFILYKSAPLM 597
Y +++FT L+L ++ F+ I++ L T W T L F+LY L
Sbjct: 35 YFTAFFVFTGIILNLLSVSIFLRKERAGTPAIQYYLVTLTLWQTALLANAFLLYSFPNLW 94
Query: 598 AGYLM 612
G+L+
Sbjct: 95 WGHLV 99
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical
protein F20D12.2 protein.
Length = 1116
Score = 32.3 bits (70), Expect = 0.98
Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Frame = +1
Query: 205 YRYACDQLKSIRQDLTVQGIRDSFTVEVYETHARIALEKG---------------DHEEF 339
Y + ++ +++R+++T + D+ + + E R+ + G ++E
Sbjct: 377 YNFLWNRTRALRKEVTQLSLSDTLALNLVERCTRLHILFGYVLCDLGVEQFDPAMNNETL 436
Query: 340 NQCQTQLKMLYSELPD---SRSNSAEFTAYRILYYIFTKNTLDLTTIFQFISNADRENEC 510
+C L+ LY + S N EF +Y ++ ++ N L + + S R+++
Sbjct: 437 GKCLQTLRHLYEDFEKRGISCENEPEFRSYDVMLHMNDTNVL--AQVLAYRSEV-RQSQP 493
Query: 511 IKHALQTRCAWATGNLHKFFILYKS 585
++ ALQ A+ N +FF L ++
Sbjct: 494 VRLALQLATAFRDNNYFRFFRLLQT 518
>AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical
protein R02F11.3b protein.
Length = 489
Score = 31.5 bits (68), Expect = 1.7
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = +1
Query: 493 DRENECIKHALQTRCAWATGNLHKFFILYKSAPLMAGYLMDWFVERERKQYLKYIIKSYV 672
D N+CI + + CAW G + ++ A +++ Y++ +V+ R+ K K+
Sbjct: 342 DHRNDCISNTVALICAW-LGTKYSYYFDPAGAIVVSMYILYTWVQTGREHLAKLSGKTAE 400
Query: 673 LKFLINF*TFKLLLQVTLNFDRTQYHLNTI 762
+F+ +++V L+ D H++T+
Sbjct: 401 PEFI------NRIIKVCLDHDARISHIDTV 424
>AF016439-3|AAB65899.2| 467|Caenorhabditis elegans Hypothetical
protein R02F11.3a protein.
Length = 467
Score = 31.5 bits (68), Expect = 1.7
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = +1
Query: 493 DRENECIKHALQTRCAWATGNLHKFFILYKSAPLMAGYLMDWFVERERKQYLKYIIKSYV 672
D N+CI + + CAW G + ++ A +++ Y++ +V+ R+ K K+
Sbjct: 320 DHRNDCISNTVALICAW-LGTKYSYYFDPAGAIVVSMYILYTWVQTGREHLAKLSGKTAE 378
Query: 673 LKFLINF*TFKLLLQVTLNFDRTQYHLNTI 762
+F+ +++V L+ D H++T+
Sbjct: 379 PEFI------NRIIKVCLDHDARISHIDTV 402
>AL110479-18|CAB54365.1| 484|Caenorhabditis elegans Hypothetical
protein Y105C5B.19 protein.
Length = 484
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 719 TCKSSLKV*KFIKNLRTYDFMMYLRYCFRSRSTNQSI 609
TC+ +L+ K IKN R D+ +L + R R+ NQ++
Sbjct: 219 TCEKNLE--KLIKNDRDVDYYEWLNFAKRCRTQNQNL 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,035,172
Number of Sequences: 27780
Number of extensions: 474283
Number of successful extensions: 956
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4628988508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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