Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_F07_e438_11.seq
         (1597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    25   1.8  

>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
 Frame = +1

Query: 319 KGDHEEFNQCQTQLKMLYSE----LPDSRSNSAEFTAYRILYYIFTKNTLDLTTIFQFIS 486
           KG  + F    +Q K +  +    +P +    +E T  R L          +  I Q I 
Sbjct: 403 KGSPDGFESVTSQYKNIREDDARHIPHASVTDSENTVPRYLSPDVISALKGVRFIAQHIK 462

Query: 487 NADRENECIK 516
           NAD++NE I+
Sbjct: 463 NADKDNEVIE 472


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,343
Number of Sequences: 438
Number of extensions: 6123
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 56223750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)