Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_F04_e414_12.seq
         (1648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    26   0.92 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   4.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   6.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   6.5  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 25.8 bits (54), Expect = 0.92
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 484 PRQTHTPEMVESLSPPKRQTEAKACLRILSRRWNM 380
           PR    P++V     PKRQ   K C R  ++ +N+
Sbjct: 61  PRTPLQPKLVAGKLKPKRQFICKYCNRQFTKSYNL 95


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 528 YESYEWTKLDPHSPDTKALLRDYFSW 605
           Y    +   +P SP+ + LL   FSW
Sbjct: 224 YHQENFENYEPKSPEDEELLDAIFSW 249


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 282 EKFDPEHYSIWYCQYKYP 335
           EKFDP+ +    CQ ++P
Sbjct: 421 EKFDPDRFLPENCQKRHP 438


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 282 EKFDPEHYSIWYCQYKYP 335
           EKFDP+ +    CQ ++P
Sbjct: 421 EKFDPDRFLPENCQKRHP 438


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,172
Number of Sequences: 336
Number of extensions: 4094
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 49983400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)