Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_F04_e414_12.seq
         (1648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical p...   241   1e-63
Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...   241   1e-63
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...   241   1e-63
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p...    33   0.44 
Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical pr...    29   7.2  
Z69885-4|CAA93757.1|  208|Caenorhabditis elegans Hypothetical pr...    29   9.5  

>Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical
           protein F17C11.9c protein.
          Length = 365

 Score =  241 bits (590), Expect = 1e-63
 Identities = 105/161 (65%), Positives = 129/161 (80%), Gaps = 1/161 (0%)
 Frame = +3

Query: 177 SKDPFDSMPKGSFNMDDFKRFYSNEEEA-KSIPYFWEKFDPEHYSIWYCQYKYPEELAKV 353
           SKDPF  MPKG+F +D+FKR YSNE+ A K+IP+FWE FD +++SIW C+YKYPE+L   
Sbjct: 206 SKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLA 265

Query: 354 FMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSTISGVWVWRGHELAFPLSPDWQIDYE 533
           FMSCNLI GM+QRL+K++K AFAS+ LFG DN+STISG+WVW+G +LAF LSPDWQ+DYE
Sbjct: 266 FMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYE 325

Query: 534 SYEWTKLDPHSPDTKALLRDYFSWTGTDKDGRKFNQGKIFK 656
           SY WTKLD  S  TK  + +Y  W G D  G+KFNQGKIFK
Sbjct: 326 SYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 365


>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score =  241 bits (590), Expect = 1e-63
 Identities = 105/161 (65%), Positives = 129/161 (80%), Gaps = 1/161 (0%)
 Frame = +3

Query: 177 SKDPFDSMPKGSFNMDDFKRFYSNEEEA-KSIPYFWEKFDPEHYSIWYCQYKYPEELAKV 353
           SKDPF  MPKG+F +D+FKR YSNE+ A K+IP+FWE FD +++SIW C+YKYPE+L   
Sbjct: 214 SKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLA 273

Query: 354 FMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSTISGVWVWRGHELAFPLSPDWQIDYE 533
           FMSCNLI GM+QRL+K++K AFAS+ LFG DN+STISG+WVW+G +LAF LSPDWQ+DYE
Sbjct: 274 FMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYE 333

Query: 534 SYEWTKLDPHSPDTKALLRDYFSWTGTDKDGRKFNQGKIFK 656
           SY WTKLD  S  TK  + +Y  W G D  G+KFNQGKIFK
Sbjct: 334 SYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 373


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score =  241 bits (590), Expect = 1e-63
 Identities = 105/161 (65%), Positives = 129/161 (80%), Gaps = 1/161 (0%)
 Frame = +3

Query: 177 SKDPFDSMPKGSFNMDDFKRFYSNEEEA-KSIPYFWEKFDPEHYSIWYCQYKYPEELAKV 353
           SKDPF  MPKG+F +D+FKR YSNE+ A K+IP+FWE FD +++SIW C+YKYPE+L   
Sbjct: 239 SKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLA 298

Query: 354 FMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSTISGVWVWRGHELAFPLSPDWQIDYE 533
           FMSCNLI GM+QRL+K++K AFAS+ LFG DN+STISG+WVW+G +LAF LSPDWQ+DYE
Sbjct: 299 FMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYE 358

Query: 534 SYEWTKLDPHSPDTKALLRDYFSWTGTDKDGRKFNQGKIFK 656
           SY WTKLD  S  TK  + +Y  W G D  G+KFNQGKIFK
Sbjct: 359 SYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 398


>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
            protein K07E12.1b protein.
          Length = 12268

 Score = 33.5 bits (73), Expect = 0.44
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +3

Query: 501  PLSPDWQIDYESYEWTKL 554
            PL PD Q+D+++YEW KL
Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689


>Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical
           protein F35E2.7 protein.
          Length = 633

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 243 SNEEEAKSIPYFWEKFDPEHYSIWYCQYKYPEELA 347
           SN ++A  +   W   D EH ++ YC+Y+ P  LA
Sbjct: 406 SNIDDAIRLNNDWNIHDIEHLNVPYCKYETPGPLA 440


>Z69885-4|CAA93757.1|  208|Caenorhabditis elegans Hypothetical
           protein T04C10.4 protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +1

Query: 76  HEXKXQXKKEQPKXEGRACRTRYRGRV**ETQGSPKTRLTRCQRGLSI 219
           H  K   KKE+ K + R   TRYR     E +   K     C  GLS+
Sbjct: 133 HPYKTPEKKERKKAQNRLAATRYR-----EKKRREKEEAMTCIEGLSV 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,861,010
Number of Sequences: 27780
Number of extensions: 409519
Number of successful extensions: 989
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4805429774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)