Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_F03_e406_11.seq
(1575 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 50 5e-06
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 48 2e-05
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 47 4e-05
06_03_1387 - 29820358-29821035 41 0.003
06_03_0414 - 20548577-20549006,20553521-20553744 41 0.003
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 41 0.003
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 40 0.005
01_06_1343 - 36461476-36461961,36463355-36463519 39 0.009
05_06_0082 - 25425050-25425479,25426551-25426783 37 0.038
01_06_0712 + 31397167-31397402,31399823-31400252 37 0.038
09_02_0464 - 9591139-9591571,9592601-9592818 37 0.050
05_03_0286 - 11623575-11624063,11625098-11625262 36 0.066
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 36 0.088
05_07_0127 - 27872803-27873238,27873842-27874059 36 0.12
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 36 0.12
01_06_0186 + 27294973-27295211,27295610-27296045 36 0.12
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 35 0.15
05_01_0036 + 253734-253904,255216-255707 34 0.35
03_06_0407 - 33714563-33714636,33714966-33715152,33715943-337160... 33 0.62
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 33 0.82
03_01_0647 + 4745788-4745907,4746510-4746591,4746847-4746958,474... 32 1.1
06_03_1187 + 28267535-28267568,28267620-28267645,28267808-282679... 32 1.4
03_06_0637 - 35219212-35219754,35220405-35220587 32 1.4
09_06_0029 + 20336634-20336881,20337737-20338208 31 2.5
07_01_0685 - 5177340-5177363,5177770-5177865,5177991-5178053,517... 31 2.5
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 31 2.5
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 31 3.3
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 30 5.8
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 29 7.6
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 29 7.6
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 50.0 bits (114), Expect = 5e-06
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 2/143 (1%)
Frame = +2
Query: 326 RIRVVVLGSPRSGKSAVVVRYLTKRYIG-EYSSTGDFLYQHRVAFDGAVSEVEILDTSNC 502
R + V +G GKS +++++ KR+ E +TG VA DG ++++I DT+
Sbjct: 8 RFKFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDTAGQ 67
Query: 503 AIRGCLAE-HVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLE 679
C+ + R A +VY + + L+GNK DL
Sbjct: 68 EAFRCITRSYYRGNAACLLVYDITRRETFFNHLASWLEDATQHASARMTIILIGNKCDLS 127
Query: 680 HAREVHAEEGQXLSLRFGCQFYE 748
H R V +EG+ + G F E
Sbjct: 128 HRRVVSYQEGEQFAKEHGLLFME 150
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 48.4 bits (110), Expect = 2e-05
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 2/145 (1%)
Frame = +2
Query: 320 VNRIRVVVLGSPRSGKSAVVVRYLTKRYIGEYSST-GDFLYQHRVAFDGAVSEVEILDTS 496
+ ++V+LG +GKS++V+R++ +++ ST G + +A + + EI DT+
Sbjct: 9 IRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTA 68
Query: 497 NCAIRGCLAE-HVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRD 673
LA + R A VVY + P + L GNK D
Sbjct: 69 GQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPN-TIMALAGNKAD 127
Query: 674 LEHAREVHAEEGQXLSLRFGCQFYE 748
+ AR+V AEE + + G F E
Sbjct: 128 MVEARQVPAEEAKTYAQENGLFFME 152
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 47.2 bits (107), Expect = 4e-05
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQ-HRVAFDGAVSEVEILDTSNCA- 505
++V+LG GKS ++ R+ + ST +Q ++ DG + +I DT+
Sbjct: 16 KIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQER 75
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R +VY + T L+GNK DL+HA
Sbjct: 76 FRAVTSAYYRGAVGALLVYDI-SRRQTFDSVGRWLNELHTHSDMNVVTILVGNKTDLKHA 134
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
REV EG+ L+ G F E
Sbjct: 135 REVSTAEGKALAESQGLFFME 155
>06_03_1387 - 29820358-29821035
Length = 225
Score = 40.7 bits (91), Expect = 0.003
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHR-VAFDGAVSEVEILDTSNCA- 505
+VVV+G GK+ ++ R+ + + ST +Q R V G + +I DT+
Sbjct: 9 KVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAGQER 68
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R +VY V V L+GNK DL HA
Sbjct: 69 YRAVTSAYYRGALGAMLVYDV-TSRRSFHHAARWLHDLRAHADNSIVVMLIGNKADLSHA 127
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
R V A+E + G F E
Sbjct: 128 RAVAADEAAAFAEDQGLFFSE 148
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 40.7 bits (91), Expect = 0.003
Identities = 37/141 (26%), Positives = 56/141 (39%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHR-VAFDGAVSEVEILDTSNCA- 505
+VV++G GKS ++ R+ + E ST + R + DG V + +I DT+
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQER 75
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R +VY V P V L+GNK DL H
Sbjct: 76 YRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIV-VMLVGNKSDLRHL 134
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
V +EG+ + R F E
Sbjct: 135 VAVQTDEGKAFAERESLYFME 155
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 40.7 bits (91), Expect = 0.003
Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHR-VAFDGAVSEVEILDTSNC-A 505
+ +++G GKS +++++ KR+ + T + R + D +++I DT+ +
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQES 67
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + R +VY + V L+GNK DL H
Sbjct: 68 FRSITRSYYRGAAGALLVYDI-TRRETFNHLASWLEDARQHANANMTVMLIGNKCDLSHR 126
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
R V EEG+ + G F E
Sbjct: 127 RAVSYEEGEQFAKEHGLVFME 147
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 39.9 bits (89), Expect = 0.005
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHR-VAFDGAVSEVEILDTSNC-A 505
+ +++G GKS +++++ KR+ + T + R + D +++I DT+ +
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDTAGQES 67
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + R +VY + + L+GNK DL H
Sbjct: 68 FRSITRSYYRGAAGALLVYDI-TRRETFNHLASWLEDARQHANANMTIMLVGNKSDLSHR 126
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
R V EEG+ + G F E
Sbjct: 127 RAVSYEEGEQFAKEHGLIFME 147
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 39.1 bits (87), Expect = 0.009
Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHR-VAFDGAVSEVEILDTSNCA- 505
++V++G GKS ++ R+ + E ST + R + +G + +I DT+
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQER 73
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R +V+ + V ++GNK DL H
Sbjct: 74 YRAITSAYYRGAVGALLVFDI-TKRQTFDNVQRWLRELRDHADANIVVMMVGNKSDLNHL 132
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
R V E+G S + G F E
Sbjct: 133 RSVPEEDGHAFSEKEGLSFLE 153
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 37.1 bits (82), Expect = 0.038
Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHR-VAFDGAVSEVEILDTSNCA- 505
+VV++G GKS ++ R+ + E ST + R + DG V + +I DT+
Sbjct: 19 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQER 78
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R +VY V P + L+GNK DL H
Sbjct: 79 YRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCM-LIGNKSDLRHL 137
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
V E+G+ + F E
Sbjct: 138 VAVSTEDGKEFAEAESMYFME 158
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 37.1 bits (82), Expect = 0.038
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 2/129 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHR-VAFDGAVSEVEILDTSNCA- 505
+ V++G GKS ++ R+ + E ST + R + DG V + +I DT+
Sbjct: 20 KTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAGQER 79
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R +VY V P V L+GNK DL H
Sbjct: 80 YRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIV-VMLVGNKSDLRHL 138
Query: 686 REVHAEEGQ 712
V E+G+
Sbjct: 139 VAVSTEDGK 147
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 36.7 bits (81), Expect = 0.050
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHR-VAFDGAVSEVEILDTSNCA- 505
+VV++G GKS ++ R+ + E ST + R + D V + +I DT+
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 73
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R VVY V + L+GNK DL H
Sbjct: 74 YRAITSAYYRGAVGALVVYDV-TRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHL 132
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
R V E+ + + R F E
Sbjct: 133 RAVSVEDAKGFAERESTFFME 153
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 36.3 bits (80), Expect = 0.066
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSST-GDFLYQHRVAFDGAVSEVEILDTSNCA- 505
++V++G GKS ++ R+ + + ST G + +G + +I DT+
Sbjct: 14 KMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQER 73
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R +VY + + ++GNK DL H
Sbjct: 74 YRAITSAYYRGAVGALLVYDI-TKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHL 132
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
R V +EG+ L+ + G F E
Sbjct: 133 RAVSEDEGKALAEKEGLFFLE 153
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 35.9 bits (79), Expect = 0.088
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIG-EYSSTGDFLYQHR-VAFDGAVSEVEILDTSNCA 505
+++++G GKS+++V +++ +I E + T ++ + + +G ++ I DT+
Sbjct: 14 KILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKKLKLTIWDTAGQE 73
Query: 506 -IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLL-GNKRDLE 679
RG + + R +VY V + +L GNK D
Sbjct: 74 RFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIELHSTNKECIKMLVGNKVDKN 133
Query: 680 HAREVHAEEGQXLSLRFGCQFYE 748
R V EEG + GC F E
Sbjct: 134 EERMVTREEGLAFAQESGCLFLE 156
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 35.5 bits (78), Expect = 0.12
Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHR-VAFDGAVSEVEILDTSNCA- 505
+VV++G GKS ++ R+ + E ST + R + D V + +I DT+
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 73
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R VVY V + L+GNK DL H
Sbjct: 74 YRAITSAYYRGAVGALVVYDV-TRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHL 132
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
R V E+ + + + F E
Sbjct: 133 RAVSTEDAKAFAEKENTFFME 153
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 35.5 bits (78), Expect = 0.12
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 647 VTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
+ ++GNK DL H R V E+GQ L+ + G F E
Sbjct: 151 IMMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLE 184
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 35.5 bits (78), Expect = 0.12
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 2/136 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSST-GDFLYQHRVAFDGAVSEVEILDTSNCA- 505
+VV++G GKS ++ R+ + E ST G V D + + +I DT+
Sbjct: 21 KVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQER 80
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R VVY V V L+GNK DL H
Sbjct: 81 YRAITSAYYRGAVGALVVYDV-TRRITFENAERWLKELRDHTDANIVVMLVGNKADLRHL 139
Query: 686 REVHAEEGQXLSLRFG 733
R V AE+ + + G
Sbjct: 140 RAVPAEDARAFAEAHG 155
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 35.1 bits (77), Expect = 0.15
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 329 IRVVVLGSPRSGKSAVVVRYLTKRYIGEYSST--GDFLYQHRVAFDGAVSEVEILDTSNC 502
++V++LG GK++++ +Y+ K++ +Y +T DFL + V D + ++I DT+
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK-EVQIDDRLFTLQIWDTAGQ 67
Query: 503 -AIRGCLAEHVRWGDAFAVVYSV 568
+ R D +VY V
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDV 90
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 33.9 bits (74), Expect = 0.35
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAF-DGAVSEVEILDTSNCA- 505
+VV++G GKS ++ R+ + E ST + R +G + + +I DT+
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQER 75
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R +VY V + L+GNK DL+H
Sbjct: 76 YRAITSAYYRGALGAVLVYDV-SKPTTFDNISRWLKELRDHADANIRIMLVGNKTDLKHL 134
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
R V ++ + G + E
Sbjct: 135 RAVATDDAHKFAEAEGLSYIE 155
>03_06_0407 -
33714563-33714636,33714966-33715152,33715943-33716093,
33716520-33716632,33717022-33717085,33717180-33717391,
33717540-33717621,33717811-33717866,33718004-33718072,
33718524-33718772,33718873-33719049,33719556-33719702,
33719794-33719926,33720093-33720307
Length = 642
Score = 33.1 bits (72), Expect = 0.62
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Frame = +2
Query: 329 IRVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTSNC-A 505
+RVVV+G P +GKS++VV T+ + F V + I+DTS+
Sbjct: 16 VRVVVIGDPGTGKSSLVVSVATEAFPENVPRVMPPTRLPADYFPDRV-PITIVDTSSSPE 74
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R L + DA + Y+ C RL A V ++G K DL
Sbjct: 75 HRAKLIAECQAADAVVLTYA-CDRPATLERLSTFWLPELRRLQLKAPVIVVGCKLDLRDE 133
Query: 686 REVHAEE 706
++V E+
Sbjct: 134 QQVSLEQ 140
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 32.7 bits (71), Expect = 0.82
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 644 AVTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
A L+GNK DL++ REV EEG+ L+ G F E
Sbjct: 128 AKMLVGNKCDLDNIREVPVEEGKALAEAEGLFFME 162
>03_01_0647 +
4745788-4745907,4746510-4746591,4746847-4746958,
4747607-4747697,4747805-4747969
Length = 189
Score = 32.3 bits (70), Expect = 1.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 623 TRLPGCAAVTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
T+ G + L+GNK DL R++ +EG+ + G F E
Sbjct: 84 TQRGGDVIIVLVGNKTDLVDKRQISTDEGEAKAQEHGAMFME 125
>06_03_1187 +
28267535-28267568,28267620-28267645,28267808-28267975,
28268148-28268196,28268329-28268402,28268512-28268841
Length = 226
Score = 31.9 bits (69), Expect = 1.4
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 1/127 (0%)
Frame = +2
Query: 371 AVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTSNCAIRGCLAE-HVRWGDA 547
A +V YL I E S+ G + + D A +++I DT+ LA + R A
Sbjct: 8 AKLVVYLGISNILE-STIGAAFFSQVLIMDEATVKLDIWDTAGQERYHSLAPMYYRGAAA 66
Query: 548 FAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHAREVHAEEGQXLSLR 727
VVY + P + L+GNK DLE R+V +E + R
Sbjct: 67 AVVVYDISSTDSYIRARKWVDELQRQGNPHLV-MALVGNKVDLEEKRQVGTQEAMEYAER 125
Query: 728 FGCQFYE 748
G F E
Sbjct: 126 NGLFFIE 132
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 647 VTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
V L+GNK DL+H R V E+ + R G F E
Sbjct: 144 VMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVE 177
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 31.1 bits (67), Expect = 2.5
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 3/142 (2%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHR-VAFDGAVSEVEILDTSNC-A 505
+VVV+G GK+ ++ R+ + + ST +Q R ++ + +I DT+
Sbjct: 24 KVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAGQER 83
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R VVY + G V L+GNK D+
Sbjct: 84 YRAVTSAYYRGALGAMVVYDI-TRRRTFENVARWVEELRAHADGSTVVALIGNKADMPAG 142
Query: 686 -REVHAEEGQXLSLRFGCQFYE 748
REV A+E + G F E
Sbjct: 143 RREVAADEAARFAEEQGLFFSE 164
>07_01_0685 -
5177340-5177363,5177770-5177865,5177991-5178053,
5178138-5178232,5178941-5179028,5179372-5179444,
5179866-5179920,5180355-5180463
Length = 200
Score = 31.1 bits (67), Expect = 2.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 653 LLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
L+GNK D++ R V +GQ L+ +G +F+E
Sbjct: 129 LVGNKVDMDTKRVVSTAQGQKLADEYGMKFFE 160
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 31.1 bits (67), Expect = 2.5
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLY-QHRVAFDGAVSEVEILDTSNCAI 508
++V+LG R GK+++V+RY+ + + +T Y R+ +G + I DT+
Sbjct: 16 KLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQEK 75
Query: 509 RGCLAE-HVRWGDAFAVVYSV 568
L + R DA +VY +
Sbjct: 76 FHALGPIYYRDADAALLVYDI 96
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 30.7 bits (66), Expect = 3.3
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +3
Query: 738 NSMKCQQRXLVQAQHL-------RFMHYLREARAXGTYYCPRXDESLLPTLS 872
N K +R V+A+++ R++ Y+R RA Y C R D+ L+P ++
Sbjct: 332 NEEKHMERFAVRAKYMTLDPAKNRYIKYIRNIRAIQDYLCNRADKHLVPKIN 383
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 653 LLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
L+GNK D E R V EEG + GC F E
Sbjct: 135 LVGNKIDKEDERTVTREEGLAFAEESGCLFLE 166
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 653 LLGNKRDLEHA-REVHAEEGQXLSLRFGCQFYE 748
L+GNK D++ + R V +GQ L+ +G +F+E
Sbjct: 103 LVGNKADMDESKRAVPTSKGQALADEYGIKFFE 135
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 653 LLGNKRDLEHA-REVHAEEGQXLSLRFGCQFYE 748
L+GNK D++ + R V +GQ L+ +G +F+E
Sbjct: 103 LVGNKADMDESKRAVPTSKGQALADEYGIKFFE 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,109,276
Number of Sequences: 37544
Number of extensions: 557107
Number of successful extensions: 1170
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5093325412
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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