Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_F03_e406_11.seq
(1575 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 9e-10
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 61 2e-09
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 60 5e-09
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 59 8e-09
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 58 2e-08
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 6e-08
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 55 2e-07
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 52 1e-06
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 51 2e-06
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 50 4e-06
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 48 3e-05
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 46 1e-04
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 44 3e-04
SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-04
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-04
SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05) 44 4e-04
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 41 0.002
SB_39298| Best HMM Match : Ras (HMM E-Value=0.11) 37 0.051
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 36 0.067
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 36 0.067
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 36 0.12
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 35 0.21
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.36
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 31 1.9
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 31 2.5
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 31 2.5
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 31 2.5
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 31 3.3
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 30 4.4
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 30 4.4
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 30 5.8
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 29 7.7
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.7
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 62.5 bits (145), Expect = 9e-10
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Frame = +2
Query: 314 MTVNR-IRVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILD 490
MT NR + V VLG GKSA VR LT+R+IGEY + Y+H + DG +++LD
Sbjct: 176 MTNNRALSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLD 235
Query: 491 TSNCAIR------------GCLA------EHVRWG----DAFAVVYSVCXXXXXXXXXXX 604
T+ R G LA E + + + ++YS
Sbjct: 236 TAGKVSREARMSPRQKTKTGQLAPTGNSEEKLERASENTEIYFLLYSTTDKRSFTEAEEI 295
Query: 605 XXXXXXTRLPGCAAVTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYEV 751
T+ + +T++ K+DL H REV EG+ L+ +GC F ++
Sbjct: 296 AEYLFETKNIDPSTLTIVATKKDLVHMREVDEYEGRFLAQNYGCAFAQI 344
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 61.3 bits (142), Expect = 2e-09
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +2
Query: 329 IRVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTSNCAI 508
++VV++G GKSA+ VR+LTKR+IGEY T + Y+ G V +E+ DT+
Sbjct: 862 VKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGENS 921
Query: 509 RGCLAEHVRWGDAFAVVYSV 568
L + G+ F V+YS+
Sbjct: 922 PAKLERCLEIGEVFVVLYSI 941
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 60.1 bits (139), Expect = 5e-09
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTSNCAIR 511
++VV+G GKSA+ ++++ ++ +Y T + Y+ + D V+ ++ILDT+
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQEEF 72
Query: 512 GCLAE-HVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHAR 688
+ E ++R G+ F +V+SV + + + GNK DLE+ R
Sbjct: 73 SAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDLEYER 132
Query: 689 EVHAEEGQXLS 721
V EGQ L+
Sbjct: 133 TVSTAEGQELA 143
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 59.3 bits (137), Expect = 8e-09
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTSNCAIR 511
R+ +LG GK+A++VR+L R++GEY T + Y+ + D +EILDT++
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASRGQN 66
Query: 512 GCLA--EHVRWGDAFAVVYS 565
C + VR GD F VVYS
Sbjct: 67 SCKLRDQFVREGDGFIVVYS 86
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 644 AVTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
+V ++GNK DL R+V +EGQ L+ +G F E
Sbjct: 141 SVLVIGNKSDLIGERDVTRDEGQRLAETYGWLFAE 175
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 58.0 bits (134), Expect = 2e-08
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTSNCAIR 511
+VVVLGS GKSA+ V+++T +++ +Y T + Y+ + D S +EILDT+
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGTEQF 64
Query: 512 GCLAE-HVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHAR 688
+ + +++ G F +VYS+ + + L+GNK D+ R
Sbjct: 65 ASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDER 124
Query: 689 EV 694
EV
Sbjct: 125 EV 126
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 56.4 bits (130), Expect = 6e-08
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Frame = +2
Query: 335 VVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTSNCAIRG 514
+V+LG GKSA++VR+ T R+I EY T + Y D + + I DT++
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTASTYEPV 189
Query: 515 CLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGC--AAVTLLGNKRDLEHAR 688
L+++ + F VVYS+ + + L GNK DL+H R
Sbjct: 190 YLSQN----EGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHCR 245
Query: 689 EVHAEEGQXLSLRFGCQFYE 748
V +E + + C F+E
Sbjct: 246 AVSRQEAREFAAEHECVFHE 265
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = +2
Query: 317 TVNRIRVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTS 496
T +RVVVLG GKSA+ VR+LT+R+IGEY T + ++H + D ++I DT+
Sbjct: 13 TTKPVRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDTA 72
Score = 43.2 bits (97), Expect = 6e-04
Identities = 23/78 (29%), Positives = 32/78 (41%)
Frame = +2
Query: 518 LAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHAREVH 697
L R GD + V+YS+ R ++ ++ K+DL+H R V
Sbjct: 120 LRRWTRRGDLYLVLYSIVDRSSFDEARWIARYVKDHRNTDSMSMVIVATKKDLDHLRRVD 179
Query: 698 AEEGQXLSLRFGCQFYEV 751
EEG S C FYEV
Sbjct: 180 IEEGLGFSNELDCTFYEV 197
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/75 (33%), Positives = 37/75 (49%)
Frame = +2
Query: 524 EHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHAREVHAE 703
+++R G+ F ++YS+ R + L+GNK DLE REV +
Sbjct: 4 QYMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQ 63
Query: 704 EGQXLSLRFGCQFYE 748
EGQ L+ RF C F+E
Sbjct: 64 EGQELAHRFDCPFFE 78
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 51.2 bits (117), Expect = 2e-06
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = +2
Query: 518 LAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHAREVH 697
L + V WGDAF ++YS+ T + + LL NK DL H R+V
Sbjct: 1052 LEDRVTWGDAFVLIYSI-TSRESFHAVWNYYYHVVTSIEAKPVIVLLANKHDLGHKRKVL 1110
Query: 698 AEEGQXLSLRFGCQFYEV 751
EG+ ++ C FYEV
Sbjct: 1111 TTEGRQMAQAIKCPFYEV 1128
Score = 29.9 bits (64), Expect = 5.8
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 371 AVVVRYLTKRYIGEYSST 424
AV VR+ TKR+IGEY S+
Sbjct: 856 AVAVRFATKRFIGEYDSS 873
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 50.4 bits (115), Expect = 4e-06
Identities = 37/139 (26%), Positives = 62/139 (44%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTSNCAIR 511
+VVVLGS GKSA+ V+++T +++ +Y T + Y H + S ++
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFY-HTAGTEQFASMRDL--------- 54
Query: 512 GCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHARE 691
+++ G F +VYS+ + + L+GNK D+ RE
Sbjct: 55 -----YIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDERE 109
Query: 692 VHAEEGQXLSLRFGCQFYE 748
V E + L+ +GC FYE
Sbjct: 110 VSVGEAKDLAEAWGCPFYE 128
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 47.6 bits (108), Expect = 3e-05
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = +2
Query: 320 VNRIRVVVLGSPRSGKSAVVVRYLTKRYIGEYSST 424
V +RVVVLG GKSA+ VR LTKR+IGEY ST
Sbjct: 14 VRSLRVVVLGQDGVGKSALTVRLLTKRFIGEYDST 48
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 45.6 bits (103), Expect = 1e-04
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +2
Query: 317 TVNRIRVVVLGSPRSGKSAVVVRYLTKRYIGEYSST-GDFLYQHRVAFDGAVSEVEILDT 493
++ R +V G+ GK+++++R+L + +YS T DF +H V F+ E++I+DT
Sbjct: 25 SLRRFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFIKH-VFFNNETYELQIIDT 83
Query: 494 SNCAIRGCLAE-HVRWGDAFAVVYS 565
S + + + GDAF +VYS
Sbjct: 84 SGTYEFPAMRKVDIAKGDAFVLVYS 108
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 44.4 bits (100), Expect = 3e-04
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 437 YQHRVAFDGAVSEVEILDTSNCAIRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXX 616
Y+ + + E++ILDT+ A ++ GD F VVYS+
Sbjct: 4 YEKELRIGDSSMELDILDTAGNGE----ASYIHNGDGFVVVYSITDYYSYEMARQLVKLV 59
Query: 617 XXTRLPG--CAA-VTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
R C + L+GNKRDL R V +E + + +GC YE
Sbjct: 60 TQVRKTDDICQIPIVLVGNKRDLRRGRCVAKDEAREFASEYGCSHYE 106
>SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 44.4 bits (100), Expect = 3e-04
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 530 VRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGC-AAVTLLGNKRDLEHAREVHAEE 706
+ WGDAF +VYS+ R G A + ++ NK D E REV +
Sbjct: 85 ILWGDAFLLVYSITSLQSFTDISCIIQQLTAMRTQGSHALLAIVANKTDAESQREVSTSD 144
Query: 707 GQXLSLRFGCQFYEV 751
G L+ C F E+
Sbjct: 145 GVALAQSLPCSFSEI 159
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 43.6 bits (98), Expect = 4e-04
Identities = 40/158 (25%), Positives = 61/158 (38%), Gaps = 13/158 (8%)
Frame = +2
Query: 314 MTVNRIRVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDT 493
M +++VV+G GKSA ++ T + GEY T Y + DG V + DT
Sbjct: 1 MNYQNVKLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDT 60
Query: 494 SNCAIRGCLAE-HVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKR 670
+ L D F V + + +P + L+GNKR
Sbjct: 61 AGQEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKI-LVGNKR 119
Query: 671 DLEHARE------------VHAEEGQXLSLRFGCQFYE 748
DL A++ + EEG+ L+ R G Q+ E
Sbjct: 120 DLRSAQQNTSLSNHRSRDPITYEEGKALAKRLGMQYLE 157
>SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05)
Length = 138
Score = 43.6 bits (98), Expect = 4e-04
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +2
Query: 548 FAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHAREVHAEEGQXLSLR 727
F ++YS+ + P + L+G KRDL H RE+ EG L+
Sbjct: 2 FLILYSIVDRTSFDEASRIARYLKWRKFPETGVLILIGTKRDLGHLREIDETEGSELAEE 61
Query: 728 FGCQFYEV 751
C FYE+
Sbjct: 62 LECPFYEL 69
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 41.1 bits (92), Expect = 0.002
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSE-VEILDTSNCAI 508
RVVVLGS GK+++V R+++ + +Y+ T LY+ V + +EI+DT+
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAGSYP 168
Query: 509 RGCLAE-HVRWGDAFAVVYSV 568
+ + ++ DAF +VYSV
Sbjct: 169 FPAMKKLTIQNADAFVLVYSV 189
>SB_39298| Best HMM Match : Ras (HMM E-Value=0.11)
Length = 64
Score = 36.7 bits (81), Expect = 0.051
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +2
Query: 530 VRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHAR 688
+RW DAF VVYS+ + V L+GNK DLEH R
Sbjct: 10 IRWADAFIVVYSITDKNSFNTAVQLVEAVYYGKGTDEVHVALVGNKTDLEHFR 62
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 36.3 bits (80), Expect = 0.067
Identities = 25/126 (19%), Positives = 52/126 (41%)
Frame = +2
Query: 374 VVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTSNCAIRGCLAEHVRWGDAFA 553
+ VR++T+R+IGEY + Y+H + G ++++DT+ + + +
Sbjct: 2 LTVRFITRRFIGEYDPCLEASYRHHLTVHGQYIAMDVVDTAGKNTPDKVDALLEAANIVY 61
Query: 554 VVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHAREVHAEEGQXLSLRFG 733
++YSV + ++ +DL+H +V EG+ L+
Sbjct: 62 LLYSVTDRASFEEAAWLARRIQQNK-------AIVATNKDLKHLSQVLEYEGRFLAQELD 114
Query: 734 CQFYEV 751
F +V
Sbjct: 115 GLFVQV 120
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 36.3 bits (80), Expect = 0.067
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHR-VAFDGAVSEVEILDTSNCA- 505
++V++G GKS+++ R+ + E ST + R + +G + + ++ DT+
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLLGNKRDLEHA 685
R + + R +VY + P V L+GNK DL+H
Sbjct: 74 YRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADP-TIVVMLVGNKCDLKHL 132
Query: 686 REVHAEEGQXLSLRFGCQFYE 748
R V +++ + G F E
Sbjct: 133 RAVASDDAKKYGDEHGLAFIE 153
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 35.5 bits (78), Expect = 0.12
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 335 VVVLGSPRSGKSAVVVRYLTKRYIGEYSST 424
+VVLG+ GK+A+VVR++T R++ EY T
Sbjct: 327 MVVLGAAGVGKTALVVRFVTGRFLNEYDPT 356
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 34.7 bits (76), Expect = 0.21
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 641 AAVTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
A V L+GNK D+E R V + G+ L+ + G +FYE
Sbjct: 13 AQVILVGNKCDMEEERVVSYDRGKQLADQLGLEFYE 48
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 33.9 bits (74), Expect = 0.36
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +2
Query: 287 YINKTVLMKMTVNRIRVVVLGSPRSGKSAVVVRYLTKRY 403
Y++ V+M V+ ++VV+LG SGK+++V RYL R+
Sbjct: 15 YVHSAVIMGSKVD-VKVVLLGKEYSGKTSLVERYLHHRF 52
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 647 VTLLGNKRDLEHAREVHAEEGQXLSLRF-GCQFYE 748
+ L+GNK DLE R V ++GQ L+ +F C F E
Sbjct: 1 MVLVGNKCDLEDERVVGKDQGQNLAKQFANCTFLE 35
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 31.1 bits (67), Expect = 2.5
Identities = 11/55 (20%), Positives = 31/55 (56%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTS 496
++ V+G GKS++ ++++ +++ Y T + + + + G +E++DT+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDTA 62
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 641 AAVTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
A L+GNK L+ REV EG+ L+ G F+E
Sbjct: 9 AKAVLVGNKCHLDCEREVSVAEGRGLAKELGLPFFE 44
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 31.1 bits (67), Expect = 2.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 647 VTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
+ L+GNK DL R+V AEEG+ + F E
Sbjct: 34 IMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIE 67
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 30.7 bits (66), Expect = 3.3
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 3/142 (2%)
Frame = +2
Query: 332 RVVVLGSPRSGKSAVVVRYLTKRYIGEYSST-GDFLYQHRVAFDGAVSEVEILDTS-NCA 505
+V+VLG GKS+++ R+ + + +T G + H DG ++++ DT+
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEK 71
Query: 506 IRGCLAEHVRWGDAFAVVYSVCXXXXXXXXXXXXXXXXXTRLPGCAAVTLL-GNKRDLEH 682
R R D +V+ V ++ G +T+L GNK D +
Sbjct: 72 YRALSRSFFRGADGALLVFDV-SVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCD-KK 129
Query: 683 AREVHAEEGQXLSLRFGCQFYE 748
++V E+ Q LS + + E
Sbjct: 130 DKKVSEEDIQNLSSCYNLSWLE 151
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 30.3 bits (65), Expect = 4.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 644 AVTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
++ L+GNK DL+H R + G+ + G F E
Sbjct: 50 SIILIGNKSDLKHLRMIENRRGKQFAAEHGMLFME 84
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 30.3 bits (65), Expect = 4.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 644 AVTLLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
+ LLGNK DLE R V E + L+ G +++E
Sbjct: 468 SAVLLGNKADLEDDRVVDEAEARALADNLGLKYFE 502
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 29.9 bits (64), Expect = 5.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 653 LLGNKRDLEHAREVHAEEGQXLSLRFGCQFYE 748
LLGNK DLE R V E + L+ G +++E
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKYFE 33
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 29.5 bits (63), Expect = 7.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 632 PGCAAVTLLGNKRDLEHAREVHAEEGQXLSLRFG 733
P A L+GNK+DLE REV E+ + +G
Sbjct: 149 PENAIKLLVGNKKDLEREREVSLEDAVNCASHYG 182
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 329 IRVVVLGSPRSGKSAVVVRYLTKRYIGEYSSTGDFLYQHRVAFDGAVSEVEILDTS 496
I+ VV+G GK+ +++ Y T ++ EY T Y V G + + DT+
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,492,191
Number of Sequences: 59808
Number of extensions: 587731
Number of successful extensions: 1315
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5152884103
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -