Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_F01_e390_11.seq
         (1582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   3.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   6.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   6.2  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 650 PLSPAGVIAKRPAPIALPNSCA 715
           P  P GV  KR  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 153 LGLLLTSIPIKGYVRKLLSFLLSLFAT 233
           LG LL   P+K YV+K    +L+   T
Sbjct: 87  LGQLLGLAPVKFYVQKFYVVILAFLLT 113


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 153 LGLLLTSIPIKGYVRKLLSFLLSLFAT 233
           LG LL   P+K YV+K    +L+   T
Sbjct: 13  LGQLLGLAPVKFYVQKFYVVILAFLLT 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 268,506
Number of Sequences: 336
Number of extensions: 5372
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47730050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)