Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030905E5_F01_e390_11.seq
         (1582 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   201   2e-51
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   201   2e-51
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   201   2e-51
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   201   2e-51
AE014298-3060|AAF50875.1|  223|Drosophila melanogaster CG11229-P...    30   7.6  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  201 bits (490), Expect = 2e-51
 Identities = 102/133 (76%), Positives = 108/133 (81%)
 Frame = +2

Query: 89  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 268
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 269 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLT 448
           L HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLT
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120

Query: 449 QPATQGGYGDRRN 487
           QP T   +G RRN
Sbjct: 121 QPNT-NNFG-RRN 131


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  201 bits (490), Expect = 2e-51
 Identities = 102/133 (76%), Positives = 108/133 (81%)
 Frame = +2

Query: 89  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 268
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 269 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLT 448
           L HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLT
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120

Query: 449 QPATQGGYGDRRN 487
           QP T   +G RRN
Sbjct: 121 QPNT-NNFG-RRN 131


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  201 bits (490), Expect = 2e-51
 Identities = 102/133 (76%), Positives = 108/133 (81%)
 Frame = +2

Query: 89  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 268
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 269 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLT 448
           L HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLT
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120

Query: 449 QPATQGGYGDRRN 487
           QP T   +G RRN
Sbjct: 121 QPNT-NNFG-RRN 131


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  201 bits (490), Expect = 2e-51
 Identities = 102/133 (76%), Positives = 108/133 (81%)
 Frame = +2

Query: 89  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 268
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 269 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLT 448
           L HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLT
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120

Query: 449 QPATQGGYGDRRN 487
           QP T   +G RRN
Sbjct: 121 QPNT-NNFG-RRN 131


>AE014298-3060|AAF50875.1|  223|Drosophila melanogaster CG11229-PA
           protein.
          Length = 223

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 577 VNCNTTHYRANWVPGPPSSXXXXXFYNISLIT 482
           VN + T  R+ W PGPP+S      Y + L T
Sbjct: 192 VNASATASRSFWFPGPPASIIHCMPYRLPLRT 223


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,543,576
Number of Sequences: 53049
Number of extensions: 1015763
Number of successful extensions: 2211
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2208
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8900184528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)