Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030905E5_E12_e477_10.seq
(1454 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 343 1e-93
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 343 1e-93
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 343 1e-93
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 343 1e-93
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 343 1e-93
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 343 1e-93
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 343 1e-93
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 341 5e-93
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 334 5e-91
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 334 5e-91
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 334 5e-91
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 334 5e-91
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 334 5e-91
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 332 2e-90
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 321 5e-87
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 305 2e-82
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 303 1e-81
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 2e-24
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 32 6.0
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 32 6.0
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 32 6.0
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 32 6.0
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 6.0
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 6.0
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 32 6.0
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 343 bits (842), Expect = 1e-93
Identities = 153/202 (75%), Positives = 173/202 (85%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+TGG NLGR+ I P
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 343 bits (842), Expect = 1e-93
Identities = 153/202 (75%), Positives = 173/202 (85%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+TGG NLGR+ I P
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 343 bits (842), Expect = 1e-93
Identities = 153/202 (75%), Positives = 173/202 (85%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+TGG NLGR+ I P
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 343 bits (842), Expect = 1e-93
Identities = 153/202 (75%), Positives = 173/202 (85%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+TGG NLGR+ I P
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 343 bits (842), Expect = 1e-93
Identities = 153/202 (75%), Positives = 173/202 (85%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+TGG NLGR+ I P
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 343 bits (842), Expect = 1e-93
Identities = 153/202 (75%), Positives = 173/202 (85%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+TGG NLGR+ I P
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 343 bits (842), Expect = 1e-93
Identities = 153/202 (75%), Positives = 173/202 (85%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+TGG NLGR+ I P
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 341 bits (837), Expect = 5e-93
Identities = 152/202 (75%), Positives = 172/202 (85%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+TGG NLGR+ I P
Sbjct: 181 CMVTGGANLGRIGVITNRERHP 202
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 334 bits (821), Expect = 5e-91
Identities = 149/202 (73%), Positives = 171/202 (84%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+ GG NLGRV I P
Sbjct: 181 CMVIGGANLGRVGVITNRERHP 202
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 334 bits (821), Expect = 5e-91
Identities = 149/202 (73%), Positives = 171/202 (84%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+ GG NLGRV I P
Sbjct: 181 CMVIGGANLGRVGVITNRERHP 202
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 334 bits (821), Expect = 5e-91
Identities = 149/202 (73%), Positives = 171/202 (84%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+ GG NLGRV I P
Sbjct: 181 CMVIGGANLGRVGVITNRERHP 202
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 334 bits (821), Expect = 5e-91
Identities = 149/202 (73%), Positives = 171/202 (84%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+ GG NLGRV I P
Sbjct: 181 CMVIGGANLGRVGVITNRERHP 202
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 334 bits (821), Expect = 5e-91
Identities = 149/202 (73%), Positives = 171/202 (84%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+ GG NLGRV I P
Sbjct: 181 CMVIGGANLGRVGVITNRERHP 202
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 332 bits (816), Expect = 2e-90
Identities = 148/201 (73%), Positives = 170/201 (84%)
Frame = +2
Query: 110 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 289
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 290 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 469
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 120
Query: 470 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLC 649
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 180
Query: 650 MITGGRNLGRVXTIVRASATP 712
M+ GG NLGRV I P
Sbjct: 181 MVIGGANLGRVGVITNRERHP 201
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 321 bits (788), Expect = 5e-87
Identities = 143/202 (70%), Positives = 166/202 (82%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 286
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 287 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 466
V KI Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAK
Sbjct: 61 VKKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAK 120
Query: 467 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 646
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKVND+VQ+D+ T KI FIKFD+GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 647 CMITGGRNLGRVXTIVRASATP 712
CM+ G NLGRV I P
Sbjct: 181 CMVIAGANLGRVGVITNRERHP 202
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 305 bits (750), Expect = 2e-82
Identities = 136/182 (74%), Positives = 155/182 (85%)
Frame = +2
Query: 167 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 346
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 347 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLV 526
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 527 THDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVXTIVRASA 706
THD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+ I
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 180
Query: 707 TP 712
P
Sbjct: 181 HP 182
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 303 bits (743), Expect = 1e-81
Identities = 137/184 (74%), Positives = 156/184 (84%)
Frame = +2
Query: 161 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 340
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 341 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPY 520
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 521 LVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVXTIVRA 700
LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+ I
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 179
Query: 701 SATP 712
P
Sbjct: 180 ERHP 183
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 2e-24
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +2
Query: 107 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 274
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 31.9 bits (69), Expect = 6.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 481 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 609
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 31.9 bits (69), Expect = 6.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 481 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 609
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 31.9 bits (69), Expect = 6.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 481 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 609
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 31.9 bits (69), Expect = 6.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 481 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 609
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 31.9 bits (69), Expect = 6.0
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 347 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 493
+YPA + D I + E+FRL+ + + RI + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 6.0
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +1
Query: 493 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 594
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 31.9 bits (69), Expect = 6.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 481 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 609
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,834,086
Number of Sequences: 237096
Number of extensions: 2494979
Number of successful extensions: 15257
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 14974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15256
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 21430371394
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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